BLASTX nr result
ID: Dioscorea21_contig00024754
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00024754
(418 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE67198.1| hypothetical protein OsJ_24304 [Oryza sativa Japo... 78 1e-28
ref|NP_001059683.1| Os07g0492100 [Oryza sativa Japonica Group] g... 78 1e-28
gb|ADJ94112.1| UvrD helicase [Hordeum vulgare subsp. vulgare] 77 2e-28
ref|XP_003563083.1| PREDICTED: ATP-dependent DNA helicase pcrA-l... 78 3e-27
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l... 77 4e-27
>gb|EEE67198.1| hypothetical protein OsJ_24304 [Oryza sativa Japonica Group]
Length = 1186
Score = 78.2 bits (191), Expect(3) = 1e-28
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = -3
Query: 158 KASIDCISEREAENFQSYVQENENSVTLTTIYQLKGLEWDIVFIVKANDSEI 3
KA ID IS RE ENF+S +EN+NS+TLTTI+Q KGLEWD+VFIV+ANDSEI
Sbjct: 855 KAFIDYISLRETENFRSRKEENKNSITLTTIHQSKGLEWDVVFIVQANDSEI 906
Score = 69.7 bits (169), Expect(3) = 1e-28
Identities = 32/58 (55%), Positives = 44/58 (75%)
Frame = -2
Query: 339 KYPLDQHAMIDVEVGRLLNEENDLRSVLEFPLDDVSDFLYAHFINLDGESTIEEKGCS 166
KY L++ A++D + G+LLNE+ND+RSVL+F +DDVSDFL HF + S EEKGC+
Sbjct: 794 KYLLEKRAIVDADGGKLLNEDNDIRSVLQFLMDDVSDFLSTHFSSSVDTSKTEEKGCA 851
Score = 23.5 bits (49), Expect(3) = 1e-28
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 418 QERSISVVISSIANMLLQ 365
+E+S+SVVISS +ML Q
Sbjct: 776 REQSVSVVISSAGDMLPQ 793
>ref|NP_001059683.1| Os07g0492100 [Oryza sativa Japonica Group]
gi|34393626|dbj|BAC83302.1| putative ATP-dependent DNA
helicase [Oryza sativa Japonica Group]
gi|50508450|dbj|BAD30552.1| putative ATP-dependent DNA
helicase [Oryza sativa Japonica Group]
gi|113611219|dbj|BAF21597.1| Os07g0492100 [Oryza sativa
Japonica Group] gi|218199642|gb|EEC82069.1| hypothetical
protein OsI_26061 [Oryza sativa Indica Group]
Length = 1165
Score = 78.2 bits (191), Expect(3) = 1e-28
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = -3
Query: 158 KASIDCISEREAENFQSYVQENENSVTLTTIYQLKGLEWDIVFIVKANDSEI 3
KA ID IS RE ENF+S +EN+NS+TLTTI+Q KGLEWD+VFIV+ANDSEI
Sbjct: 855 KAFIDYISLRETENFRSRKEENKNSITLTTIHQSKGLEWDVVFIVQANDSEI 906
Score = 69.7 bits (169), Expect(3) = 1e-28
Identities = 32/58 (55%), Positives = 44/58 (75%)
Frame = -2
Query: 339 KYPLDQHAMIDVEVGRLLNEENDLRSVLEFPLDDVSDFLYAHFINLDGESTIEEKGCS 166
KY L++ A++D + G+LLNE+ND+RSVL+F +DDVSDFL HF + S EEKGC+
Sbjct: 794 KYLLEKRAIVDADGGKLLNEDNDIRSVLQFLMDDVSDFLSTHFSSSVDTSKTEEKGCA 851
Score = 23.5 bits (49), Expect(3) = 1e-28
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 418 QERSISVVISSIANMLLQ 365
+E+S+SVVISS +ML Q
Sbjct: 776 REQSVSVVISSAGDMLPQ 793
>gb|ADJ94112.1| UvrD helicase [Hordeum vulgare subsp. vulgare]
Length = 1185
Score = 76.6 bits (187), Expect(3) = 2e-28
Identities = 37/52 (71%), Positives = 44/52 (84%)
Frame = -3
Query: 158 KASIDCISEREAENFQSYVQENENSVTLTTIYQLKGLEWDIVFIVKANDSEI 3
KA ID IS RE ENF+S +EN+NS+TLTTI+Q KGLEWD+VFIV+ NDSEI
Sbjct: 874 KAFIDYISLRETENFRSRKEENKNSITLTTIHQSKGLEWDVVFIVQVNDSEI 925
Score = 70.9 bits (172), Expect(3) = 2e-28
Identities = 33/58 (56%), Positives = 45/58 (77%)
Frame = -2
Query: 339 KYPLDQHAMIDVEVGRLLNEENDLRSVLEFPLDDVSDFLYAHFINLDGESTIEEKGCS 166
+Y L++ A+ID + G+LLNE+ND+RSVL+F +DDVSDFL HF + G S EEKGC+
Sbjct: 813 QYLLEKRAVIDNDGGKLLNEDNDIRSVLQFLMDDVSDFLSTHFSSSGGASQTEEKGCT 870
Score = 23.5 bits (49), Expect(3) = 2e-28
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 418 QERSISVVISSIANMLLQ 365
+E+S+S +ISS NML Q
Sbjct: 795 REQSVSAIISSAGNMLPQ 812
>ref|XP_003563083.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Brachypodium
distachyon]
Length = 1192
Score = 78.2 bits (191), Expect(3) = 3e-27
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = -3
Query: 158 KASIDCISEREAENFQSYVQENENSVTLTTIYQLKGLEWDIVFIVKANDSEI 3
KA ID IS RE ENF+S +EN+NS+TLTTI+Q KGLEWD+VFIV+ANDSEI
Sbjct: 881 KAFIDYISLRETENFRSRKEENKNSITLTTIHQSKGLEWDVVFIVQANDSEI 932
Score = 65.1 bits (157), Expect(3) = 3e-27
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = -2
Query: 339 KYPLDQHAMIDVEVGRLLNEENDLRSVLEFPLDDVSDFLYAHFINLDGESTIEEKGCS 166
+Y L++ A+ID + G+LLNE+ND+RSVL+F +DDVSDFL HF + EEKGC+
Sbjct: 820 QYLLEKRAVIDNDGGKLLNEDNDIRSVLQFLMDDVSDFLSTHFSSSGEICKTEEKGCA 877
Score = 23.9 bits (50), Expect(3) = 3e-27
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 418 QERSISVVISSIANMLLQ 365
+E+S+S VISS NML Q
Sbjct: 802 REQSVSAVISSAGNMLPQ 819
>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
Length = 1113
Score = 77.0 bits (188), Expect(3) = 4e-27
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = -3
Query: 164 IRKASIDCISEREAENFQSYVQENENSVTLTTIYQLKGLEWDIVFIVKANDSEI 3
+ KA ID ISERE ENF+S +NE SVTLTTI+Q KGLEWD VFIVKAN+SEI
Sbjct: 786 VLKAFIDFISERERENFRSRRHDNEESVTLTTIHQSKGLEWDTVFIVKANESEI 839
Score = 63.9 bits (154), Expect(3) = 4e-27
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Frame = -2
Query: 339 KYPLDQHAMIDVEVGRLLNEENDLRSVLEFPLDDVSDFLYAHFINLDGESTI--EEKGCS 166
KY L+Q A++DV+ G+LLNE+ND+RSVL++ LDDVSDFL F ES I +E GC
Sbjct: 725 KYLLEQRAVVDVDGGKLLNEDNDIRSVLQYLLDDVSDFLSTKFTASKEESDIIVKEGGCG 784
Query: 165 Y 163
+
Sbjct: 785 H 785
Score = 25.4 bits (54), Expect(3) = 4e-27
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -1
Query: 418 QERSISVVISSIANMLLQ 365
+E+SIS VI+S+ANM+ Q
Sbjct: 707 REQSISAVITSVANMIPQ 724