BLASTX nr result

ID: Dioscorea21_contig00024731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024731
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522438.1| PREDICTED: CHD3-type chromatin-remodeling fa...    61   1e-07
ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa...    57   1e-06
emb|CBI21082.3| unnamed protein product [Vitis vinifera]               57   1e-06
emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera]    57   1e-06

>ref|XP_003522438.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine
            max]
          Length = 1441

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
 Frame = -3

Query: 266  FIRKRYLLLEKVLNAECHKAEMGNGNLCEPANEYAEFE---PNCPKELNEHSSAASIMAK 96
            FI+KR LLLEK LNAE  K   G+    E  NE  + E    N P +  +   + + M  
Sbjct: 1198 FIKKRVLLLEKGLNAEYQKEYFGDPKSNEATNEELKSETKATNFPSD--KLGDSDTKMID 1255

Query: 95   SLPVLDCIASE---PACENKPNCMDLARLYNQMC 3
             LP ++ IASE    AC++ PN ++LARLYN+MC
Sbjct: 1256 QLPQVETIASEEIVAACDSDPNQLELARLYNEMC 1289


>ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
            vinifera]
          Length = 1472

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
 Frame = -3

Query: 266  FIRKRYLLLEKVLNAECHKAEMGNGNLCEPANEYAEFEPNCPKELNEHSSAASI-----M 102
            FI+KR LLLEK LN E  K   G+      +NE A  +P    ++ + SS +++     +
Sbjct: 1200 FIKKRVLLLEKALNTEYQKEYFGDIK----SNEIASEDPENEAKVIDISSPSNVEVDAQI 1255

Query: 101  AKSLPVLDCIASEP----ACENKPNCMDLARLYNQMC 3
               LP ++ IASE     AC++KP   ++ARLYN+MC
Sbjct: 1256 MDQLPRIEVIASEEISATACDDKPERAEMARLYNEMC 1292


>emb|CBI21082.3| unnamed protein product [Vitis vinifera]
          Length = 1356

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
 Frame = -3

Query: 266  FIRKRYLLLEKVLNAECHKAEMGNGNLCEPANEYAEFEPNCPKELNEHSSAASI-----M 102
            FI+KR LLLEK LN E  K   G+      +NE A  +P    ++ + SS +++     +
Sbjct: 1200 FIKKRVLLLEKALNTEYQKEYFGDIK----SNEIASEDPENEAKVIDISSPSNVEVDAQI 1255

Query: 101  AKSLPVLDCIASEP----ACENKPNCMDLARLYNQMC 3
               LP ++ IASE     AC++KP   ++ARLYN+MC
Sbjct: 1256 MDQLPRIEVIASEEISATACDDKPERAEMARLYNEMC 1292


>emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera]
          Length = 755

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
 Frame = -3

Query: 266 FIRKRYLLLEKVLNAECHKAEMGNGNLCEPANEYAEFEPNCPKELNEHSSAASI-----M 102
           FI+KR LLLEK LN E  K   G+      +NE A  +P    ++ + SS +++     +
Sbjct: 483 FIKKRVLLLEKALNTEYQKEYFGDIK----SNEIASEDPENEAKVIDISSPSNVEVDAQI 538

Query: 101 AKSLPVLDCIASEP----ACENKPNCMDLARLYNQMC 3
              LP ++ IASE     AC++KP   ++ARLYN+MC
Sbjct: 539 MDQLPRIEVIASEEISATACDDKPERAEMARLYNEMC 575


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