BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024728
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]       230   8e-59
emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]                 230   1e-58
emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]                 230   1e-58
ref|XP_004140765.1| PREDICTED: mediator of RNA polymerase II tra...   229   2e-58
ref|XP_004171459.1| PREDICTED: probable mediator of RNA polymera...   228   3e-58

>dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
          Length = 314

 Score =  230 bits (587), Expect = 8e-59
 Identities = 117/164 (71%), Positives = 132/164 (80%)
 Frame = -2

Query: 493 KSGCIGWIKDGEGVVVEPHRHAGVFNAKGEEYALCTKSMVAGELVYGENRVVVQNEDGTK 314
           + G  G  K G  VVVEPHRH GVF AKG+E ALCTK++V GE VY E R+ VQNEDGTK
Sbjct: 63  RGGRGGGFKGGNKVVVEPHRHGGVFIAKGKEDALCTKNLVPGEAVYNEKRISVQNEDGTK 122

Query: 313 VEYRLWDPFKSKLAAAILDDVYDIGIIPGDRVLYLGAGSGITVSHVSDIVGPMGMVYAVE 134
           VEYR+W+PF+SKLAAAIL  V DI I PG +VLYLGA SG TVSHVSD+VGP G+VYAVE
Sbjct: 123 VEYRVWNPFRSKLAAAILGGVDDIWIKPGAKVLYLGAASGTTVSHVSDLVGPGGVVYAVE 182

Query: 133 FSDRKARDLINMARKRTNVIPIIEDARQPLKYQSLVGVVDVIMS 2
           FS R  RDL+NMA+KRTNVIPIIEDAR P KY+ LVG+VDVI S
Sbjct: 183 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 226


>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score =  230 bits (586), Expect = 1e-58
 Identities = 116/164 (70%), Positives = 132/164 (80%)
 Frame = -2

Query: 493 KSGCIGWIKDGEGVVVEPHRHAGVFNAKGEEYALCTKSMVAGELVYGENRVVVQNEDGTK 314
           + G  G  K G  VVVEPHRH GVF AKG+E ALCTK++V GE VY E R+ VQNEDGTK
Sbjct: 63  RGGRGGGFKGGNKVVVEPHRHGGVFIAKGKEDALCTKNLVPGEAVYNEKRISVQNEDGTK 122

Query: 313 VEYRLWDPFKSKLAAAILDDVYDIGIIPGDRVLYLGAGSGITVSHVSDIVGPMGMVYAVE 134
           VEYR+W+PF+SKLAAA+L  V DI I PG +VLYLGA SG TVSHVSD+VGP G+VYAVE
Sbjct: 123 VEYRVWNPFRSKLAAAVLGGVDDIWIKPGAKVLYLGAASGTTVSHVSDLVGPGGVVYAVE 182

Query: 133 FSDRKARDLINMARKRTNVIPIIEDARQPLKYQSLVGVVDVIMS 2
           FS R  RDL+NMA+KRTNVIPIIEDAR P KY+ LVG+VDVI S
Sbjct: 183 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 226


>emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score =  230 bits (586), Expect = 1e-58
 Identities = 116/164 (70%), Positives = 132/164 (80%)
 Frame = -2

Query: 493 KSGCIGWIKDGEGVVVEPHRHAGVFNAKGEEYALCTKSMVAGELVYGENRVVVQNEDGTK 314
           + G  G  K G  VVVEPHRH GVF AKG+E ALCTK++V GE VY E R+ VQNEDGTK
Sbjct: 63  RGGRGGGFKGGNKVVVEPHRHGGVFIAKGKEDALCTKNLVPGEAVYNEKRISVQNEDGTK 122

Query: 313 VEYRLWDPFKSKLAAAILDDVYDIGIIPGDRVLYLGAGSGITVSHVSDIVGPMGMVYAVE 134
           VEYR+W+PF+SKLAAA+L  V DI I PG +VLYLGA SG TVSHVSD+VGP G+VYAVE
Sbjct: 123 VEYRVWNPFRSKLAAAVLGGVDDIWIKPGAKVLYLGAASGTTVSHVSDLVGPGGVVYAVE 182

Query: 133 FSDRKARDLINMARKRTNVIPIIEDARQPLKYQSLVGVVDVIMS 2
           FS R  RDL+NMA+KRTNVIPIIEDAR P KY+ LVG+VDVI S
Sbjct: 183 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 226


>ref|XP_004140765.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Cucumis sativus]
           gi|449485505|ref|XP_004157191.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 36a-like
           [Cucumis sativus]
          Length = 309

 Score =  229 bits (583), Expect = 2e-58
 Identities = 115/159 (72%), Positives = 130/159 (81%)
 Frame = -2

Query: 478 GWIKDGEGVVVEPHRHAGVFNAKGEEYALCTKSMVAGELVYGENRVVVQNEDGTKVEYRL 299
           G +K G  VVVEPHRH G+F AKG+E AL TK+MV GE VY E RV VQNEDGTK+EYR+
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRVSVQNEDGTKIEYRV 120

Query: 298 WDPFKSKLAAAILDDVYDIGIIPGDRVLYLGAGSGITVSHVSDIVGPMGMVYAVEFSDRK 119
           W+PF+SKLAAA+L  V DI I PG RVLYLGA SG TVSHVSD+VGP G+VYAVEFS R 
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRS 180

Query: 118 ARDLINMARKRTNVIPIIEDARQPLKYQSLVGVVDVIMS 2
            RDL+NMA+KRTNVIPIIEDAR P KY+ LVG+VDVI S
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 219


>ref|XP_004171459.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 36b-like, partial [Cucumis sativus]
          Length = 240

 Score =  228 bits (582), Expect = 3e-58
 Identities = 113/159 (71%), Positives = 131/159 (82%)
 Frame = -2

Query: 478 GWIKDGEGVVVEPHRHAGVFNAKGEEYALCTKSMVAGELVYGENRVVVQNEDGTKVEYRL 299
           G +K G  V+VEPHRH G+F AKG+E AL TK+MV+GE VY E R+ +QNEDGTKVEYR+
Sbjct: 62  GGMKGGSKVIVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISIQNEDGTKVEYRV 121

Query: 298 WDPFKSKLAAAILDDVYDIGIIPGDRVLYLGAGSGITVSHVSDIVGPMGMVYAVEFSDRK 119
           W+PF+SKLAAA+L  V DI I PG RVLYLGA SG TVSHVSD+VGP G+VYAVEFS R 
Sbjct: 122 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 181

Query: 118 ARDLINMARKRTNVIPIIEDARQPLKYQSLVGVVDVIMS 2
            RDL+NMA+KRTNVIPIIEDAR P KY+ LVG+VDVI S
Sbjct: 182 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFS 220