BLASTX nr result

ID: Dioscorea21_contig00024719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024719
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|2235393...   445   e-122
ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   435   e-120
ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra...   429   e-118
ref|XP_003543023.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   421   e-115
ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|2...   420   e-115

>ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|223539341|gb|EEF40932.1| tRNA,
           putative [Ricinus communis]
          Length = 311

 Score =  445 bits (1144), Expect = e-122
 Identities = 217/312 (69%), Positives = 252/312 (80%)
 Frame = +3

Query: 12  MLSIDPSKKNSFQRFISDGDLVIVYERHDNMKAVKVKKGSELQNRFGVFKHSDWIGKPFG 191
           ML  DP+++ SF R I+DGDLVIVYE+HD MKA+KV + S LQNRFGVFKHSDWIGKPFG
Sbjct: 1   MLHTDPTRRLSFTRCITDGDLVIVYEKHDTMKAIKVCETSVLQNRFGVFKHSDWIGKPFG 60

Query: 192 SKVLSSKGGFVYILAPTPELWTLVLSHRTQILYIADISFVISYLEIVPGCVVXXXXXXXX 371
           SKV S+KGGFVY+LAPTPELWTLVLSHRTQILYIADISF+I+YLEIVPGC+V        
Sbjct: 61  SKVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFLITYLEIVPGCLVLESGTGSG 120

Query: 372 XXXXXXARAVAPSGHVHTFDFHEQRAGLARDDFERNGLSNLVTVAVRDIQGEGFPDEFQR 551
                 ARAVAP+GHV+TFDFHEQRA  AR+DFE+ G+S+LVTV VRDIQGEGFPDE+  
Sbjct: 121 SLTTSLARAVAPTGHVYTFDFHEQRAASAREDFEKTGVSSLVTVGVRDIQGEGFPDEYSG 180

Query: 552 IIDSVFLDLPQPWLAIPSAARMLKQDGVLCSFSPCIEQVQRSCEALRSNFTDIRTFEVLL 731
           ++DSVFLDLPQPWLAIPSAA+MLKQDGVLCSFSPCIEQVQRSCE LRSNFTDIRTFEVLL
Sbjct: 181 LVDSVFLDLPQPWLAIPSAAKMLKQDGVLCSFSPCIEQVQRSCETLRSNFTDIRTFEVLL 240

Query: 732 RTYEIQEGRIQSSDGDESYRRITHTRRKRQCISSEDNGENTDKASSNPTVTVRPCQEARG 911
           RTYE++E ++    G+E     +   ++RQ       G N   +SS+P +  RPC ++RG
Sbjct: 241 RTYEVREVKMDCGQGEEGISLGSPPYKRRQ---RSSEGSNVQNSSSSPVIMARPCGDSRG 297

Query: 912 HTGYLTFARLNC 947
           HTGYLTFARL C
Sbjct: 298 HTGYLTFARLKC 309


>ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
           TRMT61A [Vitis vinifera]
          Length = 324

 Score =  435 bits (1119), Expect = e-120
 Identities = 220/312 (70%), Positives = 246/312 (78%)
 Frame = +3

Query: 12  MLSIDPSKKNSFQRFISDGDLVIVYERHDNMKAVKVKKGSELQNRFGVFKHSDWIGKPFG 191
           ML ID  K+ SF+R ISDGDLVIVYERHDNMKAVKV +GS LQNRFGVFKHSDWIGKPFG
Sbjct: 1   MLPIDAEKRISFKRCISDGDLVIVYERHDNMKAVKVCEGSTLQNRFGVFKHSDWIGKPFG 60

Query: 192 SKVLSSKGGFVYILAPTPELWTLVLSHRTQILYIADISFVISYLEIVPGCVVXXXXXXXX 371
           SKVLS+KGGFVY+LAPTPELWTLVLSHRTQILYIADIS VI YLEI+PGC+V        
Sbjct: 61  SKVLSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISLVIMYLEIIPGCLVLESGTGSG 120

Query: 372 XXXXXXARAVAPSGHVHTFDFHEQRAGLARDDFERNGLSNLVTVAVRDIQGEGFPDEFQR 551
                 ARAVAP+GHV+TFDFHEQRA  AR+DFE+ GLS+ VTV VRDIQGEGFPDEF  
Sbjct: 121 SLTTSLARAVAPNGHVYTFDFHEQRAASAREDFEKIGLSSFVTVGVRDIQGEGFPDEFSG 180

Query: 552 IIDSVFLDLPQPWLAIPSAARMLKQDGVLCSFSPCIEQVQRSCEALRSNFTDIRTFEVLL 731
           + DSVFLDLPQPWLAIPSA +MLK+DGVLCSFSPCIEQVQRS E L SNFTDIRTFEVLL
Sbjct: 181 LADSVFLDLPQPWLAIPSAGKMLKEDGVLCSFSPCIEQVQRSSETLTSNFTDIRTFEVLL 240

Query: 732 RTYEIQEGRIQSSDGDESYRRITHTRRKRQCISSEDNGENTDKASSNPTVTVRPCQEARG 911
           RTYE++EG++  S G+E         ++RQ         N  +  ++ TV  RP  EARG
Sbjct: 241 RTYEVREGKMDCSQGNEGGFLGPRPGKRRQ---RSGEASNEGEIPTSTTVMARPAAEARG 297

Query: 912 HTGYLTFARLNC 947
           HTG+LTFARL C
Sbjct: 298 HTGFLTFARLKC 309


>ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic
           subunit TRMT61A-like [Cucumis sativus]
           gi|449528672|ref|XP_004171327.1| PREDICTED: tRNA
           (adenine(58)-N(1))-methyltransferase catalytic subunit
           TRMT61A-like [Cucumis sativus]
          Length = 310

 Score =  429 bits (1103), Expect = e-118
 Identities = 224/314 (71%), Positives = 245/314 (78%), Gaps = 2/314 (0%)
 Frame = +3

Query: 12  MLSIDPSKKNSFQRFISDGDLVIVYERHDNMKAVKVKKGSELQNRFGVFKHSDWIGKPFG 191
           ML  D  K  SF R I DGDLVIVYERHD MKAVKV  GS LQNRFGVFKHSDWIGKPFG
Sbjct: 1   MLPTDELKSISFTRSIRDGDLVIVYERHDIMKAVKVCDGSTLQNRFGVFKHSDWIGKPFG 60

Query: 192 SKVLSSKGGFVYILAPTPELWTLVLSHRTQILYIADISFVISYLEIVPGCVVXXXXXXXX 371
           SK LS+KGGFVY+LAPTPELWTLVLSHRTQILYIADISFVI +LEIVPGC+V        
Sbjct: 61  SKALSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMFLEIVPGCLVLESGTGSG 120

Query: 372 XXXXXXARAVAPSGHVHTFDFHEQRAGLARDDFERNGLSNLVTVAVRDIQGEGFPDEFQR 551
                 ARAVAP+GHV+TFDFHEQRA  AR+DFE+ GL++LVTV VRDIQG+GFP+EF  
Sbjct: 121 SLTTSLARAVAPTGHVYTFDFHEQRASSAREDFEKTGLTSLVTVGVRDIQGQGFPEEFVG 180

Query: 552 IIDSVFLDLPQPWLAIPSAARMLKQDGVLCSFSPCIEQVQRSCEALRSNFTDIRTFEVLL 731
           + DSVFLDLPQPWLAIPSA RMLKQDG+LCSFSPCIEQVQRS E LRS FTDIRTFEVLL
Sbjct: 181 LADSVFLDLPQPWLAIPSAERMLKQDGMLCSFSPCIEQVQRSVETLRSKFTDIRTFEVLL 240

Query: 732 RTYEIQEGRIQSS--DGDESYRRITHTRRKRQCISSEDNGENTDKASSNPTVTVRPCQEA 905
           RTYE++EGR +S+  DG  S       RR R   S + + E      S+ TV VRPC EA
Sbjct: 241 RTYEVKEGRTESNQVDGGGSVGLPPCKRRLRSKESDDMDNE------SSTTVMVRPCSEA 294

Query: 906 RGHTGYLTFARLNC 947
           RGHTGYLTFARL C
Sbjct: 295 RGHTGYLTFARLRC 308


>ref|XP_003543023.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
           TRMT61A-like [Glycine max]
          Length = 309

 Score =  421 bits (1081), Expect = e-115
 Identities = 216/310 (69%), Positives = 248/310 (80%)
 Frame = +3

Query: 12  MLSIDPSKKNSFQRFISDGDLVIVYERHDNMKAVKVKKGSELQNRFGVFKHSDWIGKPFG 191
           ML++ P+KK SF R I++GDLVIVYERHD MKAV V +GS LQNRFGVFKHS+WIGKPFG
Sbjct: 1   MLALHPAKKLSFNRPINNGDLVIVYERHDIMKAVTVSEGSVLQNRFGVFKHSEWIGKPFG 60

Query: 192 SKVLSSKGGFVYILAPTPELWTLVLSHRTQILYIADISFVISYLEIVPGCVVXXXXXXXX 371
           SKV+SSKGGFVY+LAPTPELWTLVL+HRTQILYIADISFVI YLEIVPGCVV        
Sbjct: 61  SKVVSSKGGFVYLLAPTPELWTLVLNHRTQILYIADISFVIMYLEIVPGCVVLESGTGSG 120

Query: 372 XXXXXXARAVAPSGHVHTFDFHEQRAGLARDDFERNGLSNLVTVAVRDIQGEGFPDEFQR 551
                 ARAVAPSGHV+TFDFHEQRA  AR DFER GLS+LVTV VRDIQGEGFPD F  
Sbjct: 121 SLTTSLARAVAPSGHVYTFDFHEQRAASARADFERTGLSSLVTVQVRDIQGEGFPDTFTG 180

Query: 552 IIDSVFLDLPQPWLAIPSAARMLKQDGVLCSFSPCIEQVQRSCEALRSNFTDIRTFEVLL 731
           + DSVFLDLPQPWL IPSAA++L+ DG LCSFSPCIEQVQR+CE LR+ FTDIRTFEVLL
Sbjct: 181 MADSVFLDLPQPWLVIPSAAKVLRHDGTLCSFSPCIEQVQRTCETLRTCFTDIRTFEVLL 240

Query: 732 RTYEIQEGRIQSSDGDESYRRITHTRRKRQCISSEDNGENTDKASSNPTVTVRPCQEARG 911
           RTYE++E ++QS  GD +    +   ++RQC  S+ +   +  + S  +V  RPC EARG
Sbjct: 241 RTYEVREEKMQSLCGDGNG---SLPSKRRQC--SDGSYVLSSSSPSISSVMARPCGEARG 295

Query: 912 HTGYLTFARL 941
           HTGYLTFAR+
Sbjct: 296 HTGYLTFARV 305


>ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|222866018|gb|EEF03149.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  420 bits (1080), Expect = e-115
 Identities = 211/312 (67%), Positives = 242/312 (77%)
 Frame = +3

Query: 12  MLSIDPSKKNSFQRFISDGDLVIVYERHDNMKAVKVKKGSELQNRFGVFKHSDWIGKPFG 191
           ML  D  KK SF R I DGDLVIVYE+ D MKAVKV + S LQNRFGVFKHSDWIGKPFG
Sbjct: 1   MLCSDGEKKLSFCRSIKDGDLVIVYEKRDVMKAVKVCETSVLQNRFGVFKHSDWIGKPFG 60

Query: 192 SKVLSSKGGFVYILAPTPELWTLVLSHRTQILYIADISFVISYLEIVPGCVVXXXXXXXX 371
           SKVLS+KGGFVY+LAPTPELWTLVLSHRTQILYIADISF+I+YLEIVPG +V        
Sbjct: 61  SKVLSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFLITYLEIVPGSLVLESGTGSG 120

Query: 372 XXXXXXARAVAPSGHVHTFDFHEQRAGLARDDFERNGLSNLVTVAVRDIQGEGFPDEFQR 551
                 ARAVAP+GHV+TFDFH+QRA  AR+DF+  G+ +LVTV  RDIQGEGFPDE+  
Sbjct: 121 SLTTSLARAVAPTGHVYTFDFHQQRAASAREDFQSTGVGSLVTVGARDIQGEGFPDEYSG 180

Query: 552 IIDSVFLDLPQPWLAIPSAARMLKQDGVLCSFSPCIEQVQRSCEALRSNFTDIRTFEVLL 731
           + DSVFLDLPQPWLAI SA +MLKQDG LCSFSPCIEQVQR+CEAL+SNF DIRTFEVLL
Sbjct: 181 LADSVFLDLPQPWLAILSAGKMLKQDGTLCSFSPCIEQVQRTCEALKSNFRDIRTFEVLL 240

Query: 732 RTYEIQEGRIQSSDGDESYRRITHTRRKRQCISSEDNGENTDKASSNPTVTVRPCQEARG 911
           RT+E+ EG++ S  GDE     +   ++RQ       G     +SS+PT+  RPC +ARG
Sbjct: 241 RTFEVHEGKMDSCQGDEGVSVGSPPYKRRQ---RSSEGSIVQDSSSSPTIKARPCADARG 297

Query: 912 HTGYLTFARLNC 947
           HTGYLTF+RL C
Sbjct: 298 HTGYLTFSRLKC 309


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