BLASTX nr result

ID: Dioscorea21_contig00024708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024708
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331414.1| white-brown-complex ABC transporter family [...    73   2e-11
ref|NP_001064944.1| Os10g0494300 [Oryza sativa Japonica Group] g...    71   1e-10
ref|XP_002262619.1| PREDICTED: ABC transporter G family member 1...    71   1e-10
ref|XP_004152433.1| PREDICTED: ABC transporter G family member 1...    70   2e-10
ref|XP_002467016.1| hypothetical protein SORBIDRAFT_01g018360 [S...    70   2e-10

>ref|XP_002331414.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222873628|gb|EEF10759.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 698

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
 Frame = -2

Query: 316 VNRSKWADLSVLFSXXXXXXXXXXXXXXISEDVTPWVRGWIARRRLHQKK-TNNSAI--D 146
           V+RSKW DLSV+FS              ISEDVTPW+RG+IARRR+ QK  T N+ +  D
Sbjct: 621 VHRSKWVDLSVIFSMIVIYRVIFFIMIKISEDVTPWIRGYIARRRMQQKNGTQNTTVAPD 680

Query: 145 LAQRTPSLRAYVADHGS 95
               +PSLR YVADH S
Sbjct: 681 GLTHSPSLRNYVADHRS 697


>ref|NP_001064944.1| Os10g0494300 [Oryza sativa Japonica Group]
           gi|22128707|gb|AAM92819.1| putative ABC transporter
           [Oryza sativa Japonica Group] gi|31432832|gb|AAP54419.1|
           ABC-2 type transporter family protein, expressed [Oryza
           sativa Japonica Group] gi|113639553|dbj|BAF26858.1|
           Os10g0494300 [Oryza sativa Japonica Group]
          Length = 723

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/72 (52%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = -2

Query: 316 VNRSKWADLSVLFSXXXXXXXXXXXXXXISEDVTPWVRGWIARRRLHQKKTNNSAIDL-A 140
           V+RSKW DL+VLFS              +SEDVTPWVRG++ARRR+  K       DL A
Sbjct: 644 VSRSKWLDLAVLFSMIFIYRLLFFAMIKVSEDVTPWVRGYVARRRVQGKGARGRGADLSA 703

Query: 139 QRTPSLRAYVAD 104
            R+PSLRAYV D
Sbjct: 704 ARSPSLRAYVVD 715


>ref|XP_002262619.1| PREDICTED: ABC transporter G family member 11 [Vitis vinifera]
           gi|297737190|emb|CBI26391.3| unnamed protein product
           [Vitis vinifera]
          Length = 705

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
 Frame = -2

Query: 316 VNRSKWADLSVLFSXXXXXXXXXXXXXXISEDVTPWVRGWIARRRLHQKKTNNS---AID 146
           V RSKW DLSV+FS              I+EDVTPWVRG+IARRR+ QK  N +   A D
Sbjct: 625 VKRSKWIDLSVIFSMIVVYRIIFFIMIKINEDVTPWVRGYIARRRMQQKNGNQTTTIAPD 684

Query: 145 LAQRTPSLRAYVADHGSAS 89
              ++PSLR+YVA  G+ S
Sbjct: 685 GLTQSPSLRSYVATTGTGS 703


>ref|XP_004152433.1| PREDICTED: ABC transporter G family member 11-like [Cucumis
           sativus] gi|449524820|ref|XP_004169419.1| PREDICTED: ABC
           transporter G family member 11-like [Cucumis sativus]
          Length = 696

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
 Frame = -2

Query: 316 VNRSKWADLSVLFSXXXXXXXXXXXXXXISEDVTPWVRGWIARRRLHQKK---TNNSAID 146
           +NRSKW DLSVLF               I+EDVTPW+RG+IARRR+ QK        A D
Sbjct: 615 LNRSKWVDLSVLFGMIVIYRLIFIIMIKINEDVTPWIRGYIARRRMQQKNGIVNTTVAPD 674

Query: 145 LAQRTPSLRAYVADHGSASS 86
              ++PSLR+YVA+H +  S
Sbjct: 675 GLTQSPSLRSYVANHSTRPS 694


>ref|XP_002467016.1| hypothetical protein SORBIDRAFT_01g018360 [Sorghum bicolor]
           gi|241920870|gb|EER94014.1| hypothetical protein
           SORBIDRAFT_01g018360 [Sorghum bicolor]
          Length = 615

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/74 (51%), Positives = 46/74 (62%)
 Frame = -2

Query: 316 VNRSKWADLSVLFSXXXXXXXXXXXXXXISEDVTPWVRGWIARRRLHQKKTNNSAIDLAQ 137
           VNRSKW DL+VLFS              ISEDVTPWVR +IA+RR+  ++     ++LA 
Sbjct: 538 VNRSKWLDLAVLFSMIVIYRLLFFVMIKISEDVTPWVRRYIAQRRVQNRRQRK--VELAT 595

Query: 136 RTPSLRAYVADHGS 95
           RTPSLR YV D  S
Sbjct: 596 RTPSLRGYVVDVAS 609


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