BLASTX nr result

ID: Dioscorea21_contig00024707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024707
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001049738.2| Os03g0280700 [Oryza sativa Japonica Group] g...    64   1e-08
gb|ABF95302.1| expressed protein [Oryza sativa Japonica Group]         61   1e-07
gb|EEE58811.1| hypothetical protein OsJ_10364 [Oryza sativa Japo...    60   2e-07
gb|EEC74984.1| hypothetical protein OsI_11027 [Oryza sativa Indi...    60   2e-07
ref|XP_002534051.1| conserved hypothetical protein [Ricinus comm...    59   4e-07

>ref|NP_001049738.2| Os03g0280700 [Oryza sativa Japonica Group]
           gi|255674408|dbj|BAF11652.2| Os03g0280700 [Oryza sativa
           Japonica Group]
          Length = 773

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
 Frame = -1

Query: 349 NGSRLVGTGAARKGI-ASPVPKPVGRGLDRGNGLFKKGLY--------SSKMAVDSNCGV 197
           +G  LV   ++ +G+  +P    +GRG  R  G   +G          +S  AVD    V
Sbjct: 2   SGGGLVAAASSSRGLQTTPGMAGIGRGRSRRRGEAGEGWMERNAAAGSTSPAAVDHRGTV 61

Query: 196 DFPDEKNP-------IGLGYRQNPCKTVSGTPIKTLINEEMSKELETRRPTPSLVARLMG 38
                 NP       +  G  ++  K  SGTP+KTLI+EE SK++  R  +P +V RLMG
Sbjct: 62  LRKQTSNPGMLSDSMLAAGNWRSKSKKASGTPMKTLIDEEFSKDVNARHTSPGVVGRLMG 121

Query: 37  LDSLPSSKVANK 2
           LDSLPS    N+
Sbjct: 122 LDSLPSFGANNQ 133


>gb|ABF95302.1| expressed protein [Oryza sativa Japonica Group]
          Length = 1055

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 46/141 (32%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
 Frame = -1

Query: 349 NGSRLVGTGAARKGI-ASPVPKPVGRGLDRGNGLFKKGLY--------SSKMAVDSNCGV 197
           +G  LV   ++ +G+  +P    +GRG  R  G   +G          +S  AVD    V
Sbjct: 2   SGGGLVAAASSSRGLQTTPGMAGIGRGRSRRRGEAGEGWMERNAAAGSTSPAAVDHRGTV 61

Query: 196 DFPDEKNP----------------IGLGYRQNPCKTVSGTPIKTLINEEMSKELETRRPT 65
                 NP                +  G  ++  K  SGTP+KTLI+EE SK++  R  +
Sbjct: 62  LRKQTSNPGMLSDSMVSDLHLVEELAAGNWRSKSKKASGTPMKTLIDEEFSKDVNARHTS 121

Query: 64  PSLVARLMGLDSLPSSKVANK 2
           P +V RLMGLDSLPS    N+
Sbjct: 122 PGVVGRLMGLDSLPSFGANNQ 142


>gb|EEE58811.1| hypothetical protein OsJ_10364 [Oryza sativa Japonica Group]
          Length = 1036

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
 Frame = -1

Query: 283 VGRGLDRGNGLFKKGLY--------SSKMAVDSNCGVDFPDEKNP-------IGLGYRQN 149
           +GRG  R  G   +G          +S  AVD    V      NP       +  G  ++
Sbjct: 4   IGRGRSRRRGEAGEGWMERNAAAGSTSPAAVDHRGTVLRKQTSNPGMLSDSMLAAGNWRS 63

Query: 148 PCKTVSGTPIKTLINEEMSKELETRRPTPSLVARLMGLDSLPSSKVANK 2
             K  SGTP+KTLI+EE SK++  R  +P +V RLMGLDSLPS    N+
Sbjct: 64  KSKKASGTPMKTLIDEEFSKDVNARHTSPGVVGRLMGLDSLPSFGANNQ 112


>gb|EEC74984.1| hypothetical protein OsI_11027 [Oryza sativa Indica Group]
          Length = 1036

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
 Frame = -1

Query: 283 VGRGLDRGNGLFKKGLY--------SSKMAVDSNCGVDFPDEKNP-------IGLGYRQN 149
           +GRG  R  G   +G          +S  AVD    V      NP       +  G  ++
Sbjct: 4   IGRGRSRRRGEAGEGWMERNAAAGSTSPAAVDHRGTVLRKQTSNPGMLSDSMLAAGNWRS 63

Query: 148 PCKTVSGTPIKTLINEEMSKELETRRPTPSLVARLMGLDSLPSSKVANK 2
             K  SGTP+KTLI+EE SK++  R  +P +V RLMGLDSLPS    N+
Sbjct: 64  KSKKASGTPMKTLIDEEFSKDVNARHTSPGVVGRLMGLDSLPSFGANNQ 112


>ref|XP_002534051.1| conserved hypothetical protein [Ricinus communis]
           gi|223525922|gb|EEF28329.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 779

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/55 (50%), Positives = 41/55 (74%)
 Frame = -1

Query: 166 LGYRQNPCKTVSGTPIKTLINEEMSKELETRRPTPSLVARLMGLDSLPSSKVANK 2
           LG+R +  K  +GTPIK L+ EEMS+E E+R+ +P ++ARLMG D LP  ++A+K
Sbjct: 5   LGWRSS--KQATGTPIKKLLAEEMSRETESRKKSPGVIARLMGFDGLPPQQLAHK 57


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