BLASTX nr result

ID: Dioscorea21_contig00024694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024694
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm...    93   3e-17
ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm...    92   4e-17
ref|XP_004134477.1| PREDICTED: uncharacterized protein LOC101208...    81   8e-14
ref|NP_568185.1| Mitochondrial transcription termination factor ...    81   8e-14

>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/119 (39%), Positives = 70/119 (58%)
 Frame = +1

Query: 1   AVLAFFASHGFTKDQISKXXXXXXXXXXXXXXXXXKPKMEFYLGAGFSSSDLAKLFGSDT 180
           +VLA   +HGF++ QIS                   PK++F+L  G S   LA+   SD 
Sbjct: 95  SVLALLRNHGFSRTQISSLVKKRPFLLLSNPTNTLLPKLDFFLSLGMSRPHLARTLSSDP 154

Query: 181 QLLRSSLKKRIIPSFNLLRTILHSDKDIITAVKYTPWLLHLDIQKNMVPNVDLLHSLGV 357
            LL  SL+ +I+PS+N L+TIL SD+ I++A K T W+   D+ KN++PN++LL  +GV
Sbjct: 155 TLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKVGV 213


>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
           gi|223540048|gb|EEF41625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/118 (40%), Positives = 68/118 (57%)
 Frame = +1

Query: 4   VLAFFASHGFTKDQISKXXXXXXXXXXXXXXXXXKPKMEFYLGAGFSSSDLAKLFGSDTQ 183
           VLA     GFTK QIS                   PK+EF+   G SSSDLA+   SD  
Sbjct: 72  VLALLKDRGFTKTQISSLVKKRPSLLLAHAHNTLLPKLEFFYSIGVSSSDLARTLSSDPT 131

Query: 184 LLRSSLKKRIIPSFNLLRTILHSDKDIITAVKYTPWLLHLDIQKNMVPNVDLLHSLGV 357
           LL  S++ +I+PS+N L++IL S++ I++A+K T W+   D  KN++PNV+ L  +GV
Sbjct: 132 LLTRSIENQIVPSYNFLKSILLSNEKIVSALKRTTWIFLEDYSKNLMPNVERLREIGV 189


>ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis]
           gi|223540049|gb|EEF41626.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/119 (41%), Positives = 68/119 (57%)
 Frame = +1

Query: 1   AVLAFFASHGFTKDQISKXXXXXXXXXXXXXXXXXKPKMEFYLGAGFSSSDLAKLFGSDT 180
           AVLA     GF+K QIS                   PK+EF+   G S+S LA+   SD 
Sbjct: 96  AVLALLRDRGFSKTQISSLVKKRPFLLLAHPQNTLLPKLEFFYSIGASNSALARALSSDP 155

Query: 181 QLLRSSLKKRIIPSFNLLRTILHSDKDIITAVKYTPWLLHLDIQKNMVPNVDLLHSLGV 357
            LL  SL+ +IIPS+N L++IL SD+ I++A+K T W+   D  KN++PN++LL   GV
Sbjct: 156 TLLTRSLENQIIPSYNFLKSILLSDEKIVSALKRTTWIFLEDHSKNLIPNIELLREAGV 214


>ref|XP_004134477.1| PREDICTED: uncharacterized protein LOC101208530 [Cucumis sativus]
          Length = 368

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/118 (34%), Positives = 70/118 (59%)
 Frame = +1

Query: 4   VLAFFASHGFTKDQISKXXXXXXXXXXXXXXXXXKPKMEFYLGAGFSSSDLAKLFGSDTQ 183
           V+A  A+HGF++ QIS                   PK+ F+   GFSS ++A+L  +  +
Sbjct: 62  VIALLANHGFSESQISALAKRFPPILSAKPEKTLLPKLLFFQSKGFSSPEIARLVCAFPR 121

Query: 184 LLRSSLKKRIIPSFNLLRTILHSDKDIITAVKYTPWLLHLDIQKNMVPNVDLLHSLGV 357
           +L  SL KRIIPSF+ ++ +L S++    A+K+ P +L LD++ ++ PN+++L  +GV
Sbjct: 122 ILTRSLDKRIIPSFDYIQAVLGSEEKTFAAIKHYPDILGLDLRNSVGPNIEILKQIGV 179


>ref|NP_568185.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
           [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
           putative protein [Arabidopsis thaliana]
           gi|10176724|dbj|BAB09954.1| unnamed protein product
           [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
           thaliana] gi|332003836|gb|AED91219.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 405

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/118 (36%), Positives = 62/118 (52%)
 Frame = +1

Query: 4   VLAFFASHGFTKDQISKXXXXXXXXXXXXXXXXXKPKMEFYLGAGFSSSDLAKLFGSDTQ 183
           VL     HGFT  QIS                   PK+ F+L  G S S LA+   SD  
Sbjct: 104 VLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPT 163

Query: 184 LLRSSLKKRIIPSFNLLRTILHSDKDIITAVKYTPWLLHLDIQKNMVPNVDLLHSLGV 357
           +L  SL  ++IPS+N L+++L SD+ I+ A++ T W+   D  KN+VPN++ +   GV
Sbjct: 164 ILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGV 221


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