BLASTX nr result
ID: Dioscorea21_contig00024694
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00024694 (358 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2... 96 3e-18 ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm... 93 3e-17 ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm... 92 4e-17 ref|XP_004134477.1| PREDICTED: uncharacterized protein LOC101208... 81 8e-14 ref|NP_568185.1| Mitochondrial transcription termination factor ... 81 8e-14 >ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1| predicted protein [Populus trichocarpa] Length = 400 Score = 95.9 bits (237), Expect = 3e-18 Identities = 47/119 (39%), Positives = 70/119 (58%) Frame = +1 Query: 1 AVLAFFASHGFTKDQISKXXXXXXXXXXXXXXXXXKPKMEFYLGAGFSSSDLAKLFGSDT 180 +VLA +HGF++ QIS PK++F+L G S LA+ SD Sbjct: 95 SVLALLRNHGFSRTQISSLVKKRPFLLLSNPTNTLLPKLDFFLSLGMSRPHLARTLSSDP 154 Query: 181 QLLRSSLKKRIIPSFNLLRTILHSDKDIITAVKYTPWLLHLDIQKNMVPNVDLLHSLGV 357 LL SL+ +I+PS+N L+TIL SD+ I++A K T W+ D+ KN++PN++LL +GV Sbjct: 155 TLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKVGV 213 >ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis] gi|223540048|gb|EEF41625.1| conserved hypothetical protein [Ricinus communis] Length = 377 Score = 92.8 bits (229), Expect = 3e-17 Identities = 48/118 (40%), Positives = 68/118 (57%) Frame = +1 Query: 4 VLAFFASHGFTKDQISKXXXXXXXXXXXXXXXXXKPKMEFYLGAGFSSSDLAKLFGSDTQ 183 VLA GFTK QIS PK+EF+ G SSSDLA+ SD Sbjct: 72 VLALLKDRGFTKTQISSLVKKRPSLLLAHAHNTLLPKLEFFYSIGVSSSDLARTLSSDPT 131 Query: 184 LLRSSLKKRIIPSFNLLRTILHSDKDIITAVKYTPWLLHLDIQKNMVPNVDLLHSLGV 357 LL S++ +I+PS+N L++IL S++ I++A+K T W+ D KN++PNV+ L +GV Sbjct: 132 LLTRSIENQIVPSYNFLKSILLSNEKIVSALKRTTWIFLEDYSKNLMPNVERLREIGV 189 >ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis] gi|223540049|gb|EEF41626.1| conserved hypothetical protein [Ricinus communis] Length = 406 Score = 92.0 bits (227), Expect = 4e-17 Identities = 49/119 (41%), Positives = 68/119 (57%) Frame = +1 Query: 1 AVLAFFASHGFTKDQISKXXXXXXXXXXXXXXXXXKPKMEFYLGAGFSSSDLAKLFGSDT 180 AVLA GF+K QIS PK+EF+ G S+S LA+ SD Sbjct: 96 AVLALLRDRGFSKTQISSLVKKRPFLLLAHPQNTLLPKLEFFYSIGASNSALARALSSDP 155 Query: 181 QLLRSSLKKRIIPSFNLLRTILHSDKDIITAVKYTPWLLHLDIQKNMVPNVDLLHSLGV 357 LL SL+ +IIPS+N L++IL SD+ I++A+K T W+ D KN++PN++LL GV Sbjct: 156 TLLTRSLENQIIPSYNFLKSILLSDEKIVSALKRTTWIFLEDHSKNLIPNIELLREAGV 214 >ref|XP_004134477.1| PREDICTED: uncharacterized protein LOC101208530 [Cucumis sativus] Length = 368 Score = 81.3 bits (199), Expect = 8e-14 Identities = 41/118 (34%), Positives = 70/118 (59%) Frame = +1 Query: 4 VLAFFASHGFTKDQISKXXXXXXXXXXXXXXXXXKPKMEFYLGAGFSSSDLAKLFGSDTQ 183 V+A A+HGF++ QIS PK+ F+ GFSS ++A+L + + Sbjct: 62 VIALLANHGFSESQISALAKRFPPILSAKPEKTLLPKLLFFQSKGFSSPEIARLVCAFPR 121 Query: 184 LLRSSLKKRIIPSFNLLRTILHSDKDIITAVKYTPWLLHLDIQKNMVPNVDLLHSLGV 357 +L SL KRIIPSF+ ++ +L S++ A+K+ P +L LD++ ++ PN+++L +GV Sbjct: 122 ILTRSLDKRIIPSFDYIQAVLGSEEKTFAAIKHYPDILGLDLRNSVGPNIEILKQIGV 179 >ref|NP_568185.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1| putative protein [Arabidopsis thaliana] gi|10176724|dbj|BAB09954.1| unnamed protein product [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1| unknown protein [Arabidopsis thaliana] gi|21592327|gb|AAM64278.1| unknown [Arabidopsis thaliana] gi|332003836|gb|AED91219.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] Length = 405 Score = 81.3 bits (199), Expect = 8e-14 Identities = 43/118 (36%), Positives = 62/118 (52%) Frame = +1 Query: 4 VLAFFASHGFTKDQISKXXXXXXXXXXXXXXXXXKPKMEFYLGAGFSSSDLAKLFGSDTQ 183 VL HGFT QIS PK+ F+L G S S LA+ SD Sbjct: 104 VLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPT 163 Query: 184 LLRSSLKKRIIPSFNLLRTILHSDKDIITAVKYTPWLLHLDIQKNMVPNVDLLHSLGV 357 +L SL ++IPS+N L+++L SD+ I+ A++ T W+ D KN+VPN++ + GV Sbjct: 164 ILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGV 221