BLASTX nr result

ID: Dioscorea21_contig00024692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024692
         (1222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC73884.1| hypothetical protein OsI_08674 [Oryza sativa Indi...   192   2e-46
gb|AFW73088.1| hypothetical protein ZEAMMB73_437326 [Zea mays]        186   1e-44
gb|AFW63603.1| hypothetical protein ZEAMMB73_729481 [Zea mays]        186   1e-44
dbj|BAJ94962.1| predicted protein [Hordeum vulgare subsp. vulgare]    181   3e-43
ref|NP_001047914.1| Os02g0713700 [Oryza sativa Japonica Group] g...   180   7e-43

>gb|EEC73884.1| hypothetical protein OsI_08674 [Oryza sativa Indica Group]
          Length = 415

 Score =  192 bits (487), Expect = 2e-46
 Identities = 140/349 (40%), Positives = 157/349 (44%), Gaps = 51/349 (14%)
 Frame = +2

Query: 311  WWERADAPAMAAGVDPNSTSGAAAASRYLHPLLH-QPPPADQPKSPS------------D 451
            WWER D  AMA G+DP      A +SRY H LL  Q P    P SP+            D
Sbjct: 71   WWERPDDTAMA-GMDPGGGGAGAGSSRYFHHLLRPQQPSPLSPLSPTSHVKMEHSKMSPD 129

Query: 452  KA---------------------------TRTEASARADDPSXXXXXXXXXXXXXXXXKN 550
            K+                              E  + +   S                KN
Sbjct: 130  KSPVGEGDHAGGSGSGGVGGDHQPSSSAMVPVEGGSGSAGGSGSGGPTRRPRGRPPGSKN 189

Query: 551  KPKPPIIVTRDSPSALRSHVLEVSSGADVLETLSEYARRRGRGVCVLSGGGAVVNVALRQ 730
            KPKPPIIVTRDSP+AL SHVLEV+ GADV++ ++EYARRRGRGVCVLSGGGAVVNVALRQ
Sbjct: 190  KPKPPIIVTRDSPNALHSHVLEVAGGADVVDCVAEYARRRGRGVCVLSGGGAVVNVALRQ 249

Query: 731  PGASPPGSVVATLRGRFEILSXXXXXXXXXXXXXXXXXXXFLAXXXXXXXXXXXXXXXXX 910
            PGASPPGS+VATLRGRFEILS                   FL+                 
Sbjct: 250  PGASPPGSMVATLRGRFEILSLTGTVLPPPAPPGASGLTVFLSGGQGQVIGGSVVGPLVA 309

Query: 911  XXXXXXXXXSFANAVYERLPLEG-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 1075
                     SFANAVYERLPLEG                                    V
Sbjct: 310  AGPVVLMAASFANAVYERLPLEGEEEEVAAPAAGGEAQDQVAQSAGPPGQQPAASQSSGV 369

Query: 1076 TSGDAXXXXXXXXVPFYSLGGNVGAYQQLPGDGF-GWTGP-----RPPF 1204
            T GD         +  Y+L GNVG Y QLPGD F GW+G      RPPF
Sbjct: 370  TGGDG--TGGAGGMSLYNLAGNVGGY-QLPGDNFGGWSGAGAGGVRPPF 415


>gb|AFW73088.1| hypothetical protein ZEAMMB73_437326 [Zea mays]
          Length = 324

 Score =  186 bits (471), Expect = 1e-44
 Identities = 137/330 (41%), Positives = 153/330 (46%), Gaps = 44/330 (13%)
 Frame = +2

Query: 347  GVDPNSTSGAAAASRYLHPLLHQPPPADQPKSPS------------DKATRTEASAR--- 481
            G+DP    G   +SRY H LL        P SP+            DK+   EA A    
Sbjct: 3    GMDP----GGGGSSRYFHQLLRPQQQQSSPLSPNSHVKMEHHRMSPDKSPVGEAEAGGSG 58

Query: 482  --ADDPSXXXXXXXXXXXXXXXX---------------KNKPKPPIIVTRDSPSALRSHV 610
              AD PS                               KNKPKPPIIVTRDSP+AL SHV
Sbjct: 59   AGADQPSSSAMVPVEGGGSGSGTGGTPTRRPRGRPPGSKNKPKPPIIVTRDSPNALHSHV 118

Query: 611  LEVSSGADVLETLSEYARRRGRGVCVLSGGGAVVNVALRQPGASPPGSVVATLRGRFEIL 790
            LEV++GADV++ ++EYARRRGRGVCVLSGGGAVVNVALRQPGASPPGS+VATLRGRFEIL
Sbjct: 119  LEVAAGADVVDCVAEYARRRGRGVCVLSGGGAVVNVALRQPGASPPGSMVATLRGRFEIL 178

Query: 791  SXXXXXXXXXXXXXXXXXXXFLAXXXXXXXXXXXXXXXXXXXXXXXXXXSFANAVYERLP 970
            S                   FL+                          SFANAVYERLP
Sbjct: 179  SLTGTVLPPPAPPGASGLTVFLSGGQGQVIGGSVVGPLVAAGPVVLMAASFANAVYERLP 238

Query: 971  LEG------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSGDAXXXXXXXXVPFYSL 1132
            LEG                                     VT GDA        +  Y+L
Sbjct: 239  LEGEEEETAAAAAAGAEPQDQVAQSAGPPGQQPTASQSSGVTGGDA---AGGGGMSLYNL 295

Query: 1133 GGNVGAYQQLPGDGF-GWT-----GPRPPF 1204
             GNVGAY QLPGD F GW+     G RPPF
Sbjct: 296  AGNVGAY-QLPGDNFGGWSGGGGGGVRPPF 324


>gb|AFW63603.1| hypothetical protein ZEAMMB73_729481 [Zea mays]
          Length = 434

 Score =  186 bits (471), Expect = 1e-44
 Identities = 135/339 (39%), Positives = 153/339 (45%), Gaps = 41/339 (12%)
 Frame = +2

Query: 311  WWERADAPAMAAGVDPNSTSGAAAASRYLHPLLHQPPPADQPKSPSD------------- 451
            WWER D   M  G+DP    G   +SRY H LL        P SP+              
Sbjct: 109  WWERPDDTGMP-GMDP----GGGGSSRYFHQLLRPQQQQPSPLSPNSHVKMEHHRMSPDK 163

Query: 452  -----KATRTEASARADDPSXXXXXXXXXXXXXXXX------------KNKPKPPIIVTR 580
                 +A    + A  D PS                            KNKPKPPIIVTR
Sbjct: 164  SPVVGEADAGGSGAGGDQPSSSAMVPVEGGGSGTGTPTRRPRGRPAGSKNKPKPPIIVTR 223

Query: 581  DSPSALRSHVLEVSSGADVLETLSEYARRRGRGVCVLSGGGAVVNVALRQPGASPPGSVV 760
            DSP+AL SHVLEV++GADV++ ++E+ARRRGRGVCVLSGGGAV NVALRQPGASPPGS+V
Sbjct: 224  DSPNALHSHVLEVAAGADVVDCVAEFARRRGRGVCVLSGGGAVANVALRQPGASPPGSMV 283

Query: 761  ATLRGRFEILSXXXXXXXXXXXXXXXXXXXFLAXXXXXXXXXXXXXXXXXXXXXXXXXXS 940
            ATLRGR EILS                   FL+                          S
Sbjct: 284  ATLRGRLEILSLTGTVLPPPAPPGASGLTVFLSGGQGQVVGGSVVGPLVAAGPVVLMAAS 343

Query: 941  FANAVYERLPLEG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSGDAXX 1096
            FANAVYERLPLEG                                       VT GDA  
Sbjct: 344  FANAVYERLPLEGEEEEDETAAGAAGAEPQDQVAQSSAGPPGQQPTASQSSGVTGGDA-- 401

Query: 1097 XXXXXXVPFYSLGGNVGAYQQLPGDGF-GWT--GPRPPF 1204
                  +  Y+L GNVGAY QLPGD   GW+  G RPPF
Sbjct: 402  -----GMSLYNLAGNVGAY-QLPGDSLGGWSGGGVRPPF 434


>dbj|BAJ94962.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 331

 Score =  181 bits (460), Expect = 3e-43
 Identities = 138/337 (40%), Positives = 153/337 (45%), Gaps = 50/337 (14%)
 Frame = +2

Query: 344  AGVDPNSTSGAAAASRYLHPLLHQPPPADQPK---------------SPSDK-------A 457
            AG+DP   S  A +SRY H LL       QP                S  DK       A
Sbjct: 2    AGMDPGGGSPGAGSSRYFHHLLRPQQQQQQPSPLSPNSHVKMEHSKMSSPDKNPVGDQDA 61

Query: 458  TRTEASARADDPSXXXXXXXXXXXXXXXX-----------------KNKPKPPIIVTRDS 586
              + + A AD PS                                 KNKPKPPIIVTRDS
Sbjct: 62   GGSGSGAGADQPSSSAMVPVDGGSGGGGSGGSGGPTRRPRGRPAGSKNKPKPPIIVTRDS 121

Query: 587  PSALRSHVLEVSSGADVLETLSEYARRRGRGVCVLSGGGAVVNVALRQPGASPPGSVVAT 766
            P+AL SHVLEVS+GAD+++ ++EYARRRGRGVCVLSGGGAVVNVALRQPGASPPGSVVAT
Sbjct: 122  PNALHSHVLEVSAGADIVDCVAEYARRRGRGVCVLSGGGAVVNVALRQPGASPPGSVVAT 181

Query: 767  LRGRFEILSXXXXXXXXXXXXXXXXXXXFLAXXXXXXXXXXXXXXXXXXXXXXXXXXSFA 946
            LRGRFEILS                   FL+                          SF+
Sbjct: 182  LRGRFEILSLTGTVLPPPAPPGASGLTVFLSGGQGQVIGGSVVGTLVAAGPVVLMAASFS 241

Query: 947  NAVYERLPLEG-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSGDAXXXXXXX 1111
            NAVYERLPLEG                                    VT GDA       
Sbjct: 242  NAVYERLPLEGEEEEVAAAAAGAEAQDQVAQSGGPPGQQPAASQSSGVTGGDA------G 295

Query: 1112 XVPFYSL-GGNVGAYQQLPGDGFG-W----TGPRPPF 1204
             +  Y+L GGNVG Y QLPGD FG W     G RPPF
Sbjct: 296  GMSLYNLAGGNVGNY-QLPGDTFGAWGGGGGGVRPPF 331


>ref|NP_001047914.1| Os02g0713700 [Oryza sativa Japonica Group]
            gi|41052877|dbj|BAD07790.1| DNA-binding protein-like
            [Oryza sativa Japonica Group]
            gi|113537445|dbj|BAF09828.1| Os02g0713700 [Oryza sativa
            Japonica Group] gi|215768749|dbj|BAH00978.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 336

 Score =  180 bits (456), Expect = 7e-43
 Identities = 133/338 (39%), Positives = 150/338 (44%), Gaps = 51/338 (15%)
 Frame = +2

Query: 344  AGVDPNSTSGAAAASRYLHPLLH-QPPPADQPKSPS------------DKA--------- 457
            AG+DP      A +SRY H LL  Q P    P SP+            DK+         
Sbjct: 2    AGMDPGGGGAGAGSSRYFHHLLRPQQPSPLSPLSPTSHVKMEHSKMSPDKSPVGEGDHAG 61

Query: 458  ------------------TRTEASARADDPSXXXXXXXXXXXXXXXXKNKPKPPIIVTRD 583
                                 E  + +   S                KNKPKPPIIVTRD
Sbjct: 62   GSGSGGVGGDHQPSSSAMVPVEGGSGSAGGSGSGGPTRRPRGRPPGSKNKPKPPIIVTRD 121

Query: 584  SPSALRSHVLEVSSGADVLETLSEYARRRGRGVCVLSGGGAVVNVALRQPGASPPGSVVA 763
            SP+AL SHVLEV+ GADV++ ++EYARRRGRGVCVLSGGGAVVNVALRQPGASPPGS+VA
Sbjct: 122  SPNALHSHVLEVAGGADVVDCVAEYARRRGRGVCVLSGGGAVVNVALRQPGASPPGSMVA 181

Query: 764  TLRGRFEILSXXXXXXXXXXXXXXXXXXXFLAXXXXXXXXXXXXXXXXXXXXXXXXXXSF 943
            TLRGRFEILS                   FL+                          SF
Sbjct: 182  TLRGRFEILSLTGTVLPPPAPPGASGLTVFLSGGQGQVIGGSVVGPLVAAGPVVLMAASF 241

Query: 944  ANAVYERLPLEG-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSGDAXXXXXX 1108
            ANAVYERLPLEG                                    VT GD       
Sbjct: 242  ANAVYERLPLEGEEEEVAAPAAGGEAQDQVAQSAGPPGQQPAASQSSGVTGGDG--TGGA 299

Query: 1109 XXVPFYSLGGNVGAYQQLPGDGF-GWTGP-----RPPF 1204
              +  Y+L GNVG Y QLPGD F GW+G      RPPF
Sbjct: 300  GGMSLYNLAGNVGGY-QLPGDNFGGWSGAGAGGVRPPF 336


Top