BLASTX nr result

ID: Dioscorea21_contig00024690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024690
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299323.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002514886.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
emb|CBI27683.3| unnamed protein product [Vitis vinifera]               58   9e-07

>ref|XP_002299323.1| predicted protein [Populus trichocarpa] gi|222846581|gb|EEE84128.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/78 (42%), Positives = 49/78 (62%)
 Frame = +3

Query: 6   KAIKQDSRENSSRDGVDHSGVISVDHTLTDSKRACKRRAIPCFKCDSSSPSLMVDGNDPN 185
           K  K +++++++  G ++ G + +D  +T   R   +R+I  FK  S+ P  M  G D N
Sbjct: 307 KPPKTENKKSNNNGGNNNGGQMLLDEDITIVPRTLSKRSIRRFKSQSNPPHFMFTGCDSN 366

Query: 186 GTREYWIKTDADYLVLEL 239
           G+RE WIKTDADYLVLEL
Sbjct: 367 GSRECWIKTDADYLVLEL 384


>ref|XP_002514886.1| conserved hypothetical protein [Ricinus communis]
           gi|223545937|gb|EEF47440.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 388

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
 Frame = +3

Query: 6   KAIKQDSRENSSRDGVDHSGVISVDHTLTD-SKRACKRRAIPCFKCDSSSPSLMVDGNDP 182
           K  K D+++N++  G ++ G +  D  +T   +RA  +R+I  +K  S+ P   +  ++ 
Sbjct: 310 KPQKNDNKKNANNAGHNNGGQMLPDEEITVLPQRALSKRSIRRYKSQSNPPQFTLSSSES 369

Query: 183 NGTREYWIKTDADYLVLEL 239
           NG+RE WIKTDADYLVLEL
Sbjct: 370 NGSRECWIKTDADYLVLEL 388


>emb|CBI27683.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
 Frame = +3

Query: 30  ENSSRDGVDHSGVISV-DHTLTDS------KRACKRRAIPCFKCDSSSPSLMVDGNDPNG 188
           +N  ++G+ + G  +  D  L D       +R   + +I  +K  S+ P   + GND NG
Sbjct: 305 KNEIKNGIFYDGGCNNGDRMLPDEDIMIFPQRTLSKESIRRYKSQSNPPQFTLCGNDSNG 364

Query: 189 TREYWIKTDADYLVLEL 239
            REYWIKTDADYLVLEL
Sbjct: 365 NREYWIKTDADYLVLEL 381


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