BLASTX nr result
ID: Dioscorea21_contig00024665
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00024665
(2171 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containi... 671 0.0
gb|EAY91181.1| hypothetical protein OsI_12790 [Oryza sativa Indi... 634 e-179
gb|EAZ27917.1| hypothetical protein OsJ_11878 [Oryza sativa Japo... 631 e-178
ref|NP_001173562.1| Os03g0644100 [Oryza sativa Japonica Group] g... 631 e-178
ref|XP_003573696.1| PREDICTED: pentatricopeptide repeat-containi... 605 e-170
>ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520-like
[Vitis vinifera]
Length = 595
Score = 671 bits (1731), Expect = 0.0
Identities = 328/531 (61%), Positives = 406/531 (76%)
Frame = -3
Query: 1896 VNAETLSSVLQSCSSLKDVKRVHAVVVRLLDVPVIFIDNNLISSYLRFSQLRYAEKLFDK 1717
VNA L+ LQSC ++++V+RVHAVV + LD V +++NNLIS+Y RF +L A K+FDK
Sbjct: 64 VNANLLAFWLQSCCTVREVRRVHAVVFKCLDNSVTYVNNNLISAYSRFGKLVEARKVFDK 123
Query: 1716 MPKRNVVSWTAVLSGYLNMGLDDEALWLFQEMIENFVQPNSSTFACXXXXXXXXXXXXLG 1537
MP+RNVVSWTAV++GY G DDEAL LF + IEN V+ N TF C LG
Sbjct: 124 MPERNVVSWTAVVNGYSRYGFDDEALRLFDDCIENGVRANGKTFVCVLNLCSKRLDFELG 183
Query: 1536 RQLHACVVKGNWSNLIVDSAIVYLYAQCGDLSCASRTFERIPVRDVVCWTTMIMAYARQG 1357
RQ+HAC+VK NW NLIVDSA+V YAQCGDLS A F+++P RDVVCWTTMI A ++QG
Sbjct: 184 RQIHACIVKDNWRNLIVDSALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQG 243
Query: 1356 HGNKAFSMFSQMKQHGYKPNEFTVCNVLKGCAEEKELRFGKQLHCAIIKGMCRQDVYVGS 1177
G +A SMFSQM + PNEFTVC+VLK C EEK L FGKQLH AIIK M ++DV++G+
Sbjct: 244 RGTEALSMFSQMMFNTSSPNEFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKEDVFIGT 303
Query: 1176 SLVSMYIRCGELFDARLVFDSMTTRNTITWTCMIAGYAQNGFAEEALSLFEVMRRRRVSA 997
SLV MY +CGE+ D+R VFD M RNT+TWT +IAGYA+NG EEA+SLF VM+RR++ A
Sbjct: 304 SLVGMYAKCGEILDSRKVFDGMKKRNTVTWTSIIAGYARNGQGEEAISLFRVMKRRKIFA 363
Query: 996 NNLTIVSILSACGSSGSLYRGKEVHAQILRNHSHRNVFIGSTLIWFYCKSGEYDYAARVL 817
NNLT+VSIL ACGS+ +L GKEVHAQI++N N++IGSTL+WFYCK E+ +A++VL
Sbjct: 364 NNLTVVSILRACGSTRNLLMGKEVHAQIMKNSMQSNIYIGSTLVWFYCKCEEHPFASKVL 423
Query: 816 DAMPVRDVTSWTAIISGLAKLEHGSEALRFLHKMLHEGVEPNPFTYSSALKACAKIEDVK 637
MP+RDV SWTAIISG L H EAL FL +ML EGVEPNPFTYSSALKACA +E +
Sbjct: 424 QNMPLRDVVSWTAIISGYTSLGHEPEALEFLKEMLEEGVEPNPFTYSSALKACAHLEAIL 483
Query: 636 HGRWIHASVNKTRDLSNVFVGSSLIHMYMKCGSIKDAFKVFDTMPERNLVSWKTMVVGYA 457
G+ IH+SVNKT LSNVFVGS+LI+MY KCG + +A +VFD+MP+RNLVSWK M+VGYA
Sbjct: 484 QGKLIHSSVNKTLALSNVFVGSALINMYAKCGYVSEAIQVFDSMPQRNLVSWKAMIVGYA 543
Query: 456 KNGQCPEALRLMYRMQAEGFHVDDYVRSTVLTACADAECDIQWSSASCSYS 304
+NG C EAL+LMYRMQAEG VDDY+ +TVL+AC D E +++ SS C S
Sbjct: 544 RNGLCGEALKLMYRMQAEGIEVDDYILTTVLSACGDVEWNMESSSDHCLQS 594
>gb|EAY91181.1| hypothetical protein OsI_12790 [Oryza sativa Indica Group]
Length = 885
Score = 634 bits (1636), Expect = e-179
Identities = 310/533 (58%), Positives = 394/533 (73%)
Frame = -3
Query: 1902 SLVNAETLSSVLQSCSSLKDVKRVHAVVVRLLDVPVIFIDNNLISSYLRFSQLRYAEKLF 1723
SL +AE L+S L+ C V+RVHAV VR LD F+ NNLIS+Y RF ++ A K+F
Sbjct: 348 SLPDAEALASSLRDCGGADGVRRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDARKVF 407
Query: 1722 DKMPKRNVVSWTAVLSGYLNMGLDDEALWLFQEMIENFVQPNSSTFACXXXXXXXXXXXX 1543
D+MP+R+VVSWTA+++ YL +G E + LF +M+ + VQ NS TF C
Sbjct: 408 DEMPERSVVSWTAMMNAYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAK 467
Query: 1542 LGRQLHACVVKGNWSNLIVDSAIVYLYAQCGDLSCASRTFERIPVRDVVCWTTMIMAYAR 1363
LG+Q+H C+VKG WSN+IVDSAI + YAQCGD++ AS F+++ RDV+ WTTMI AY +
Sbjct: 468 LGQQVHCCIVKGGWSNVIVDSAIAHFYAQCGDVASASAIFDKMASRDVISWTTMITAYVQ 527
Query: 1362 QGHGNKAFSMFSQMKQHGYKPNEFTVCNVLKGCAEEKELRFGKQLHCAIIKGMCRQDVYV 1183
GHG +A MFS+M G++PNEFTVC+VLK CAEEK +RFGKQLHCA++K M + D+++
Sbjct: 528 HGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHI 587
Query: 1182 GSSLVSMYIRCGELFDARLVFDSMTTRNTITWTCMIAGYAQNGFAEEALSLFEVMRRRRV 1003
GS+LV+MY RCGE+FDA+ VFD M RNTITWT MI+GYAQ+G E+A+ LF M+ RRV
Sbjct: 588 GSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAIFLFRKMKMRRV 647
Query: 1002 SANNLTIVSILSACGSSGSLYRGKEVHAQILRNHSHRNVFIGSTLIWFYCKSGEYDYAAR 823
NNLTIV +LSACGS SLY GKE+HAQI++N N+ IGSTL+WFYCK GEY YAAR
Sbjct: 648 FVNNLTIVGLLSACGSLQSLYLGKELHAQIIKNSMEDNLQIGSTLVWFYCKCGEYTYAAR 707
Query: 822 VLDAMPVRDVTSWTAIISGLAKLEHGSEALRFLHKMLHEGVEPNPFTYSSALKACAKIED 643
+L+AMP RD SWTA+ISG L H EAL+ L ML +GV+PN +TYSSALKACAK+E
Sbjct: 708 ILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEA 767
Query: 642 VKHGRWIHASVNKTRDLSNVFVGSSLIHMYMKCGSIKDAFKVFDTMPERNLVSWKTMVVG 463
+++GR IH VNKT+D SNVFVGSSLI MYM+CG + +A +VFD MPE NLV+WK ++ G
Sbjct: 768 LQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVIITG 827
Query: 462 YAKNGQCPEALRLMYRMQAEGFHVDDYVRSTVLTACADAECDIQWSSASCSYS 304
+A+NG C EAL+ MY MQ EG VDD+V STVLT+C D+QW S S S S
Sbjct: 828 FAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSCG----DLQWKSISFSDS 876
>gb|EAZ27917.1| hypothetical protein OsJ_11878 [Oryza sativa Japonica Group]
Length = 583
Score = 631 bits (1628), Expect = e-178
Identities = 309/533 (57%), Positives = 392/533 (73%)
Frame = -3
Query: 1902 SLVNAETLSSVLQSCSSLKDVKRVHAVVVRLLDVPVIFIDNNLISSYLRFSQLRYAEKLF 1723
SL NAE L+S L+ C V+RVHAV VR LD F+ NNLIS+Y RF ++ A ++F
Sbjct: 46 SLPNAEALASSLRDCGGADGVRRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDAREVF 105
Query: 1722 DKMPKRNVVSWTAVLSGYLNMGLDDEALWLFQEMIENFVQPNSSTFACXXXXXXXXXXXX 1543
D+MP+R+VVSWTA+++ YL +G E + LF +M+ + VQ NS TF C
Sbjct: 106 DEMPERSVVSWTAMMNVYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAK 165
Query: 1542 LGRQLHACVVKGNWSNLIVDSAIVYLYAQCGDLSCASRTFERIPVRDVVCWTTMIMAYAR 1363
LG+Q+H C+VKG WSN+IVDSAI + YAQCGD++ AS F+++ RDV+ WTTMI AY +
Sbjct: 166 LGQQVHCCIVKGGWSNVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQ 225
Query: 1362 QGHGNKAFSMFSQMKQHGYKPNEFTVCNVLKGCAEEKELRFGKQLHCAIIKGMCRQDVYV 1183
GHG +A MFS+M G++PNEFTVC+VLK CAEEK +RFGKQLHCA++K M + D+++
Sbjct: 226 HGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHI 285
Query: 1182 GSSLVSMYIRCGELFDARLVFDSMTTRNTITWTCMIAGYAQNGFAEEALSLFEVMRRRRV 1003
GS+LV+MY RCGE+FDA+ VFD M RNTITWT MI+GYAQ+G E+A+ LF M+ RRV
Sbjct: 286 GSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAILLFRKMKMRRV 345
Query: 1002 SANNLTIVSILSACGSSGSLYRGKEVHAQILRNHSHRNVFIGSTLIWFYCKSGEYDYAAR 823
NNLTIV +LSACGS S Y GKE+HAQI++N N+ IGSTL+WFYCK GEY YAAR
Sbjct: 346 FVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAAR 405
Query: 822 VLDAMPVRDVTSWTAIISGLAKLEHGSEALRFLHKMLHEGVEPNPFTYSSALKACAKIED 643
+L+AMP RD SWTA+ISG L H EAL+ L ML +GV+PN +TYSSALKACAK+E
Sbjct: 406 ILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEA 465
Query: 642 VKHGRWIHASVNKTRDLSNVFVGSSLIHMYMKCGSIKDAFKVFDTMPERNLVSWKTMVVG 463
+++GR IH VNKT+D SNVFVGSSLI MYM+CG + +A VFD MPE NLV+WK ++ G
Sbjct: 466 LQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITG 525
Query: 462 YAKNGQCPEALRLMYRMQAEGFHVDDYVRSTVLTACADAECDIQWSSASCSYS 304
+A+NG C EAL+ MY MQ EG VDD+V STVLT+C D+QW S S S S
Sbjct: 526 FAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSCG----DLQWKSISFSDS 574
>ref|NP_001173562.1| Os03g0644100 [Oryza sativa Japonica Group] gi|53749418|gb|AAU90276.1|
PPR repeat containing protein [Oryza sativa Japonica
Group] gi|108710059|gb|ABF97854.1| PPR986-12, putative,
expressed [Oryza sativa Japonica Group]
gi|215707171|dbj|BAG93631.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255674740|dbj|BAH92290.1| Os03g0644100 [Oryza sativa
Japonica Group]
Length = 616
Score = 631 bits (1628), Expect = e-178
Identities = 309/533 (57%), Positives = 392/533 (73%)
Frame = -3
Query: 1902 SLVNAETLSSVLQSCSSLKDVKRVHAVVVRLLDVPVIFIDNNLISSYLRFSQLRYAEKLF 1723
SL NAE L+S L+ C V+RVHAV VR LD F+ NNLIS+Y RF ++ A ++F
Sbjct: 79 SLPNAEALASSLRDCGGADGVRRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDAREVF 138
Query: 1722 DKMPKRNVVSWTAVLSGYLNMGLDDEALWLFQEMIENFVQPNSSTFACXXXXXXXXXXXX 1543
D+MP+R+VVSWTA+++ YL +G E + LF +M+ + VQ NS TF C
Sbjct: 139 DEMPERSVVSWTAMMNVYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAK 198
Query: 1542 LGRQLHACVVKGNWSNLIVDSAIVYLYAQCGDLSCASRTFERIPVRDVVCWTTMIMAYAR 1363
LG+Q+H C+VKG WSN+IVDSAI + YAQCGD++ AS F+++ RDV+ WTTMI AY +
Sbjct: 199 LGQQVHCCIVKGGWSNVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQ 258
Query: 1362 QGHGNKAFSMFSQMKQHGYKPNEFTVCNVLKGCAEEKELRFGKQLHCAIIKGMCRQDVYV 1183
GHG +A MFS+M G++PNEFTVC+VLK CAEEK +RFGKQLHCA++K M + D+++
Sbjct: 259 HGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHI 318
Query: 1182 GSSLVSMYIRCGELFDARLVFDSMTTRNTITWTCMIAGYAQNGFAEEALSLFEVMRRRRV 1003
GS+LV+MY RCGE+FDA+ VFD M RNTITWT MI+GYAQ+G E+A+ LF M+ RRV
Sbjct: 319 GSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAILLFRKMKMRRV 378
Query: 1002 SANNLTIVSILSACGSSGSLYRGKEVHAQILRNHSHRNVFIGSTLIWFYCKSGEYDYAAR 823
NNLTIV +LSACGS S Y GKE+HAQI++N N+ IGSTL+WFYCK GEY YAAR
Sbjct: 379 FVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAAR 438
Query: 822 VLDAMPVRDVTSWTAIISGLAKLEHGSEALRFLHKMLHEGVEPNPFTYSSALKACAKIED 643
+L+AMP RD SWTA+ISG L H EAL+ L ML +GV+PN +TYSSALKACAK+E
Sbjct: 439 ILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEA 498
Query: 642 VKHGRWIHASVNKTRDLSNVFVGSSLIHMYMKCGSIKDAFKVFDTMPERNLVSWKTMVVG 463
+++GR IH VNKT+D SNVFVGSSLI MYM+CG + +A VFD MPE NLV+WK ++ G
Sbjct: 499 LQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITG 558
Query: 462 YAKNGQCPEALRLMYRMQAEGFHVDDYVRSTVLTACADAECDIQWSSASCSYS 304
+A+NG C EAL+ MY MQ EG VDD+V STVLT+C D+QW S S S S
Sbjct: 559 FAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSCG----DLQWKSISFSDS 607
>ref|XP_003573696.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520-like
[Brachypodium distachyon]
Length = 618
Score = 605 bits (1561), Expect = e-170
Identities = 297/530 (56%), Positives = 386/530 (72%)
Frame = -3
Query: 1893 NAETLSSVLQSCSSLKDVKRVHAVVVRLLDVPVIFIDNNLISSYLRFSQLRYAEKLFDKM 1714
+AE L+S+L+SC S+ DV+RVHA+ VR D P +F+ NNLI++Y RF ++ A K+FD+M
Sbjct: 83 DAEALASLLRSCGSVDDVRRVHAISVRSPDGPGMFVANNLINAYARFHEISDARKVFDEM 142
Query: 1713 PKRNVVSWTAVLSGYLNMGLDDEALWLFQEMIENFVQPNSSTFACXXXXXXXXXXXXLGR 1534
P ++VVSWTA+++GY G +E + LF +M+ + V+ NS TF C LGR
Sbjct: 143 PDKSVVSWTAIINGYQKSGNYNEVVRLFLDMVGSGVRGNSLTFVCLLKSCGEQCNTKLGR 202
Query: 1533 QLHACVVKGNWSNLIVDSAIVYLYAQCGDLSCASRTFERIPVRDVVCWTTMIMAYARQGH 1354
Q+H CVVKG WSN+I+DSA+V+ YAQCG ++ AS F+++ RDV+ WTTMI AY + G
Sbjct: 203 QVHCCVVKGGWSNVIMDSAVVHFYAQCGHIASASTMFDKMASRDVISWTTMITAYVQHGR 262
Query: 1353 GNKAFSMFSQMKQHGYKPNEFTVCNVLKGCAEEKELRFGKQLHCAIIKGMCRQDVYVGSS 1174
G+KA MFS M GY PNEFTVC++LK C++EK RFGKQLH AI+K + + D++VGS+
Sbjct: 263 GDKALEMFSVMVSEGYYPNEFTVCSILKACSDEKAFRFGKQLHGAIVKKLYKDDIHVGSA 322
Query: 1173 LVSMYIRCGELFDARLVFDSMTTRNTITWTCMIAGYAQNGFAEEALSLFEVMRRRRVSAN 994
LV+MY R GE+FDA+ VFD M RNTITWT MI+GYAQ+G E+A+ LF+ M+ RRVS N
Sbjct: 323 LVTMYARLGEVFDAQAVFDKMARRNTITWTSMISGYAQSGHGEKAILLFQNMKMRRVSIN 382
Query: 993 NLTIVSILSACGSSGSLYRGKEVHAQILRNHSHRNVFIGSTLIWFYCKSGEYDYAARVLD 814
NLTIV +LSACGS SL GKE+HAQI++N N+ IGSTL+W YCK GEY YAAR+L
Sbjct: 383 NLTIVGLLSACGSIQSLRLGKELHAQIIKNSIQENLQIGSTLVWCYCKCGEYTYAARILK 442
Query: 813 AMPVRDVTSWTAIISGLAKLEHGSEALRFLHKMLHEGVEPNPFTYSSALKACAKIEDVKH 634
MP RD SWTA+ISG + H +EAL+ L ML +GV+PN +TYSSALKACAK+E ++
Sbjct: 443 DMPDRDAISWTAMISGYNSVGHNAEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQD 502
Query: 633 GRWIHASVNKTRDLSNVFVGSSLIHMYMKCGSIKDAFKVFDTMPERNLVSWKTMVVGYAK 454
GR IH VNKT NVFVGSSLI MYM+CG++ DA +VFD MPE NLV+WK ++ G+A+
Sbjct: 503 GRRIHGVVNKTPAFLNVFVGSSLIDMYMRCGNVDDARRVFDAMPEHNLVTWKVIITGFAQ 562
Query: 453 NGQCPEALRLMYRMQAEGFHVDDYVRSTVLTACADAECDIQWSSASCSYS 304
NG C EA + MY MQ EG VDD+V S VLT+C D+QW S S+S
Sbjct: 563 NGLCEEAFKYMYLMQQEGHDVDDFVLSKVLTSCG----DLQWKSDCISFS 608