BLASTX nr result

ID: Dioscorea21_contig00024655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024655
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526458.1| conserved hypothetical protein [Ricinus comm...   241   1e-61
ref|XP_002328775.1| predicted protein [Populus trichocarpa] gi|2...   238   1e-60
ref|XP_002331110.1| predicted protein [Populus trichocarpa] gi|2...   237   1e-60
ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arab...   228   1e-57
ref|NP_194162.1| uncharacterized protein [Arabidopsis thaliana] ...   227   1e-57

>ref|XP_002526458.1| conserved hypothetical protein [Ricinus communis]
           gi|223534238|gb|EEF35953.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  241 bits (614), Expect = 1e-61
 Identities = 117/188 (62%), Positives = 153/188 (81%), Gaps = 6/188 (3%)
 Frame = +2

Query: 86  EKPIQSPPS----TLSQALASTAHLANLLPTGTVLAFQLLVPVFTNNGSCDTVTRPLTLF 253
           + P +S PS     +SQ L STA+LANLLPTGT+LAFQLL P+FTNNG+CD+VTRP+TL 
Sbjct: 40  KSPSRSSPSLSQRAISQTLTSTANLANLLPTGTLLAFQLLTPIFTNNGACDSVTRPMTLC 99

Query: 254 LLTILAVSCFLACFTDSFRSPDGK-LHYGIATLHGLWLFE-GDIIEDKDNSMEKYKVRFI 427
           LL +LA+SCFL+ FTDS +S DGK ++YGIAT  G++LF+  D +      + KYK+RFI
Sbjct: 100 LLALLAISCFLSSFTDSVKSSDGKQVYYGIATFKGIFLFDCPDPVGAGLKDLSKYKIRFI 159

Query: 428 DCMHAFMSVLVFVSIALRDKNVVSCFYPLPEHEIKEVLDIVPLGIGVLCGLLFVLFPTKR 607
           D +H+ +SVLVF++ ALRDKNVVSCFYP+P+HE +EVL+I P+GIG++C LLFV+FPT+R
Sbjct: 160 DGVHSVLSVLVFIAFALRDKNVVSCFYPMPKHETQEVLNIAPVGIGLICSLLFVVFPTRR 219

Query: 608 HGVGYPVT 631
           HG+GYPVT
Sbjct: 220 HGIGYPVT 227


>ref|XP_002328775.1| predicted protein [Populus trichocarpa] gi|222839073|gb|EEE77424.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  238 bits (606), Expect = 1e-60
 Identities = 122/226 (53%), Positives = 168/226 (74%), Gaps = 17/226 (7%)
 Frame = +2

Query: 2   MSLRPKSKNSIELQ--------TLGQDRNEETHNLIEKPIQSP--PSTLSQ-----ALAS 136
           MSLRP++ ++ +L         +     N+ ++N+  +  +SP  P TLSQ      L S
Sbjct: 1   MSLRPRTTSTKQLSIPEVSTQSSSSTTSNDNSNNVQPETPKSPSRPPTLSQRAISQTLTS 60

Query: 137 TAHLANLLPTGTVLAFQLLVPVFTNNGSCDTVTRPLTLFLLTILAVSCFLACFTDSFRSP 316
           TA+LANLLPTGT+LAFQLL P FTNNG+CD+ TRP+TL LL +LA+SCFLA FTDS RSP
Sbjct: 61  TANLANLLPTGTLLAFQLLTPFFTNNGACDSATRPMTLILLALLALSCFLASFTDSVRSP 120

Query: 317 -DGKLHYGIATLHGLWLFE-GDIIEDKDNSMEKYKVRFIDCMHAFMSVLVFVSIALRDKN 490
            DG+++YG+A+  G++LF+  D        + K+K+ FID +HA +SVLVF+S+ALR+KN
Sbjct: 121 TDGRVYYGLASFKGMYLFDCPDPAASGLVDLSKFKMGFIDVVHAVLSVLVFISVALREKN 180

Query: 491 VVSCFYPLPEHEIKEVLDIVPLGIGVLCGLLFVLFPTKRHGVGYPV 628
           V+SCFYP+P+HE +EVL IVP+G+G++C LLFV+FPT+RHG+GYPV
Sbjct: 181 VLSCFYPMPKHETQEVLSIVPIGVGLICSLLFVVFPTRRHGIGYPV 226


>ref|XP_002331110.1| predicted protein [Populus trichocarpa] gi|222872838|gb|EEF09969.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  237 bits (605), Expect = 1e-60
 Identities = 123/230 (53%), Positives = 164/230 (71%), Gaps = 20/230 (8%)
 Frame = +2

Query: 2   MSLRPKS-----KNSI--ELQTLGQDRNEETHNLIEKPIQSPPST-----------LSQA 127
           MSLRP++     K+SI  E+ T          N I K     P +           +SQ 
Sbjct: 1   MSLRPRTTPSSKKSSIPAEISTGSSSSATSNDNYINKNEPETPKSPSRPPTFSQRAISQT 60

Query: 128 LASTAHLANLLPTGTVLAFQLLVPVFTNNGSCDTVTRPLTLFLLTILAVSCFLACFTDSF 307
           L STA+LANLLPTGT+LAFQ+L P+FTNNG+CD+ T P+T  LL +LAVSCFL  FTDS 
Sbjct: 61  LTSTANLANLLPTGTLLAFQILTPIFTNNGACDSATAPMTSVLLALLAVSCFLGSFTDSV 120

Query: 308 RSP-DGKLHYGIATLHGLWLFE-GDIIEDKDNSMEKYKVRFIDCMHAFMSVLVFVSIALR 481
           +SP DG+++YG ATL G++LF+  D +    + + K K+RFID +HA +SVLVFV++ALR
Sbjct: 121 KSPTDGQVYYGFATLKGMFLFDCPDPVGSGLSDLSKLKLRFIDVVHAVLSVLVFVAVALR 180

Query: 482 DKNVVSCFYPLPEHEIKEVLDIVPLGIGVLCGLLFVLFPTKRHGVGYPVT 631
           DKNV+SCFYP+P+HE +EVLD++P+GIG++C LLF+ FPT+RHG+GYPVT
Sbjct: 181 DKNVLSCFYPMPKHETQEVLDVIPVGIGLICSLLFMAFPTRRHGIGYPVT 230


>ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arabidopsis lyrata subsp.
           lyrata] gi|297315560|gb|EFH45983.1| hypothetical protein
           ARALYDRAFT_492419 [Arabidopsis lyrata subsp. lyrata]
          Length = 213

 Score =  228 bits (580), Expect = 1e-57
 Identities = 112/200 (56%), Positives = 148/200 (74%), Gaps = 4/200 (2%)
 Frame = +2

Query: 44  TLGQDRNEETHNLIEKPIQSPPSTLSQALASTAHLANLLPTGTVLAFQLLVPVFTNNGSC 223
           T  Q+++E    L  +  Q   + +SQ L S A+LANLLPTGT+LAF LL+PVFT+NGSC
Sbjct: 13  TSSQEQSESVPQLRRQTSQH--AAMSQTLTSAANLANLLPTGTLLAFTLLIPVFTSNGSC 70

Query: 224 DTVTRPLTLFLLTILAVSCFLACFTDSFRSPDGKLHYGIATLHGLWLFEGDIIEDKDN-- 397
           D  TR LT  LLT+L++SCFL+ FTDS ++ DG ++YG AT  G+W+F+     D D   
Sbjct: 71  DYPTRVLTAGLLTLLSISCFLSSFTDSVKAEDGNVYYGFATRKGMWIFD---YPDPDGLG 127

Query: 398 --SMEKYKVRFIDCMHAFMSVLVFVSIALRDKNVVSCFYPLPEHEIKEVLDIVPLGIGVL 571
              + KY++R ID +HA +SVLVF ++ALRDKN VSCFYP PE E K+VLDIVP+G+GV+
Sbjct: 128 LPDLSKYRIRIIDWIHAVLSVLVFGAVALRDKNAVSCFYPAPEQETKKVLDIVPMGVGVI 187

Query: 572 CGLLFVLFPTKRHGVGYPVT 631
           CGLLF++FP +RHG+GYPVT
Sbjct: 188 CGLLFLVFPARRHGIGYPVT 207


>ref|NP_194162.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5051773|emb|CAB45066.1| putative protein [Arabidopsis
           thaliana] gi|7269281|emb|CAB79341.1| putative protein
           [Arabidopsis thaliana] gi|28466871|gb|AAO44044.1|
           At4g24310 [Arabidopsis thaliana]
           gi|110736143|dbj|BAF00043.1| hypothetical protein
           [Arabidopsis thaliana] gi|332659488|gb|AEE84888.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 213

 Score =  227 bits (579), Expect = 1e-57
 Identities = 110/200 (55%), Positives = 150/200 (75%), Gaps = 4/200 (2%)
 Frame = +2

Query: 44  TLGQDRNEETHNLIEKPIQSPPSTLSQALASTAHLANLLPTGTVLAFQLLVPVFTNNGSC 223
           T  Q+++E    L  +  Q   + +SQ L S A+LANLLPTGT+LAF LL+PVFT+NGSC
Sbjct: 13  TSSQEQSESVPQLRRQTSQH--AVMSQTLTSAANLANLLPTGTLLAFTLLIPVFTSNGSC 70

Query: 224 DTVTRPLTLFLLTILAVSCFLACFTDSFRSPDGKLHYGIATLHGLWLFEGDIIEDKDN-- 397
           D  T+ LT+ LLT+L++SCFL+ FTDS ++ DG ++YG AT  G+W+F+     D D   
Sbjct: 71  DYPTQVLTIVLLTLLSISCFLSSFTDSVKAEDGNVYYGFATRKGMWVFD---YPDPDGLG 127

Query: 398 --SMEKYKVRFIDCMHAFMSVLVFVSIALRDKNVVSCFYPLPEHEIKEVLDIVPLGIGVL 571
             ++ KY++R ID +HA +SVLVF ++ALRDKN VSCFYP PE E K+VLDIVP+G+GV+
Sbjct: 128 LPNLSKYRIRIIDWIHAVLSVLVFGAVALRDKNAVSCFYPAPEQETKKVLDIVPMGVGVI 187

Query: 572 CGLLFVLFPTKRHGVGYPVT 631
           CG+LF++FP +RHG+GYPVT
Sbjct: 188 CGMLFLVFPARRHGIGYPVT 207


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