BLASTX nr result

ID: Dioscorea21_contig00024622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024622
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT22761.1| putative phytochrome A [Allium cepa]                   112   4e-23
gb|AEK06025.1| phytochrome A [Populus balsamifera]                     97   1e-18
gb|AEK06022.1| phytochrome A [Populus balsamifera] gi|339778285|...    97   1e-18
gb|AEK06017.1| phytochrome A [Populus balsamifera] gi|339778273|...    97   2e-18
gb|AEK06016.1| phytochrome A [Populus balsamifera]                     97   2e-18

>gb|ACT22761.1| putative phytochrome A [Allium cepa]
          Length = 373

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = +3

Query: 3   FIPQDVVITALSQVMIASNEKGVRIVNSLSDGFMTEGLYGDNLRLQQILADFLVVSVKYS 182
           F+ QDV++TA+SQVMIA   KGVRIV +LSDGFM E +YGD+LRLQQILADFL VSVKYS
Sbjct: 210 FLFQDVMVTAISQVMIAGTGKGVRIVYNLSDGFMKESVYGDSLRLQQILADFLAVSVKYS 269

Query: 183 PSGGLVEITSELTKDQLGK 239
           PSGGLVEI + L +D++G+
Sbjct: 270 PSGGLVEIGANLFRDRVGR 288


>gb|AEK06025.1| phytochrome A [Populus balsamifera]
          Length = 1090

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/79 (55%), Positives = 64/79 (81%)
 Frame = +3

Query: 3    FIPQDVVITALSQVMIASNEKGVRIVNSLSDGFMTEGLYGDNLRLQQILADFLVVSVKYS 182
            F  ++V++ A SQVM+ SNEKG+RI+N  ++  M E LYGD++RLQQ+LADFL +SV ++
Sbjct: 948  FTLREVLVAATSQVMMKSNEKGIRIINDAAEEMMAETLYGDSIRLQQVLADFLQMSVNFT 1007

Query: 183  PSGGLVEITSELTKDQLGK 239
            PSGGL+ +++ LTKDQLG+
Sbjct: 1008 PSGGLLSVSASLTKDQLGQ 1026


>gb|AEK06022.1| phytochrome A [Populus balsamifera] gi|339778285|gb|AEK06024.1|
            phytochrome A [Populus balsamifera]
            gi|339778289|gb|AEK06026.1| phytochrome A [Populus
            balsamifera] gi|339778299|gb|AEK06031.1| phytochrome A
            [Populus balsamifera] gi|339778307|gb|AEK06035.1|
            phytochrome A [Populus balsamifera]
          Length = 1090

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/79 (55%), Positives = 64/79 (81%)
 Frame = +3

Query: 3    FIPQDVVITALSQVMIASNEKGVRIVNSLSDGFMTEGLYGDNLRLQQILADFLVVSVKYS 182
            F  ++V++ A SQVM+ SNEKG+RI+N  ++  M E LYGD++RLQQ+LADFL +SV ++
Sbjct: 948  FTLREVLVAATSQVMMKSNEKGIRIINDAAEEXMAETLYGDSIRLQQVLADFLQMSVNFT 1007

Query: 183  PSGGLVEITSELTKDQLGK 239
            PSGGL+ +++ LTKDQLG+
Sbjct: 1008 PSGGLLSVSASLTKDQLGQ 1026


>gb|AEK06017.1| phytochrome A [Populus balsamifera] gi|339778273|gb|AEK06018.1|
            phytochrome A [Populus balsamifera]
            gi|339778275|gb|AEK06019.1| phytochrome A [Populus
            balsamifera] gi|339778277|gb|AEK06020.1| phytochrome A
            [Populus balsamifera] gi|339778279|gb|AEK06021.1|
            phytochrome A [Populus balsamifera]
            gi|339778283|gb|AEK06023.1| phytochrome A [Populus
            balsamifera] gi|339778291|gb|AEK06027.1| phytochrome A
            [Populus balsamifera] gi|339778293|gb|AEK06028.1|
            phytochrome A [Populus balsamifera]
            gi|339778295|gb|AEK06029.1| phytochrome A [Populus
            balsamifera] gi|339778297|gb|AEK06030.1| phytochrome A
            [Populus balsamifera] gi|339778301|gb|AEK06032.1|
            phytochrome A [Populus balsamifera]
            gi|339778303|gb|AEK06033.1| phytochrome A [Populus
            balsamifera] gi|339778305|gb|AEK06034.1| phytochrome A
            [Populus balsamifera] gi|339778309|gb|AEK06036.1|
            phytochrome A [Populus balsamifera]
            gi|339778311|gb|AEK06037.1| phytochrome A [Populus
            balsamifera] gi|339778313|gb|AEK06038.1| phytochrome A
            [Populus balsamifera]
          Length = 1090

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/79 (55%), Positives = 64/79 (81%)
 Frame = +3

Query: 3    FIPQDVVITALSQVMIASNEKGVRIVNSLSDGFMTEGLYGDNLRLQQILADFLVVSVKYS 182
            F  ++V++ A SQVM+ SNEKG+RI+N  ++  M E LYGD++RLQQ+LADFL +SV ++
Sbjct: 948  FTLREVLVAATSQVMMKSNEKGIRIINDAAEETMAETLYGDSIRLQQVLADFLQMSVNFT 1007

Query: 183  PSGGLVEITSELTKDQLGK 239
            PSGGL+ +++ LTKDQLG+
Sbjct: 1008 PSGGLLSVSASLTKDQLGQ 1026


>gb|AEK06016.1| phytochrome A [Populus balsamifera]
          Length = 1090

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/79 (55%), Positives = 64/79 (81%)
 Frame = +3

Query: 3    FIPQDVVITALSQVMIASNEKGVRIVNSLSDGFMTEGLYGDNLRLQQILADFLVVSVKYS 182
            F  ++V++ A SQVM+ SNEKG+RI+N  ++  M E LYGD++RLQQ+LADFL +SV ++
Sbjct: 948  FTLREVLVAATSQVMMKSNEKGIRIINDAAEETMAETLYGDSIRLQQVLADFLQMSVNFT 1007

Query: 183  PSGGLVEITSELTKDQLGK 239
            PSGGL+ +++ LTKDQLG+
Sbjct: 1008 PSGGLLSVSASLTKDQLGQ 1026


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