BLASTX nr result

ID: Dioscorea21_contig00024620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024620
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440212.1| hypothetical protein SORBIDRAFT_09g027860 [S...   169   3e-40
gb|AFW79070.1| hypothetical protein ZEAMMB73_982595 [Zea mays]        162   2e-38
ref|NP_001132643.2| uncharacterized protein LOC100194118 [Zea ma...   162   2e-38
gb|ACG39212.1| hypothetical protein [Zea mays]                        161   6e-38
ref|XP_002280178.1| PREDICTED: cyclin-D1-binding protein 1 homol...   160   1e-37

>ref|XP_002440212.1| hypothetical protein SORBIDRAFT_09g027860 [Sorghum bicolor]
           gi|241945497|gb|EES18642.1| hypothetical protein
           SORBIDRAFT_09g027860 [Sorghum bicolor]
          Length = 372

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/147 (54%), Positives = 108/147 (73%), Gaps = 3/147 (2%)
 Frame = -3

Query: 433 LARVLDSHIHNIEETLQMLER--PAVSQKVDWLEVTKVGDEISKQATVAGMLWNGE-HDV 263
           L+R L+SH+  I +T QM+    P   ++ +W EV K+GD++S+QATVAGMLW+G+  DV
Sbjct: 17  LSRFLESHLQTISDTFQMMAESAPVSLERTEWSEVVKLGDQVSRQATVAGMLWSGDLPDV 76

Query: 262 KNLESNMEVYINLLQGFLLLCHSSSAGAGPTLHACIVASARNVVDRSLKLFKEAVSFCDS 83
           + L+ N++ Y N+LQGFLL+CH S  GAGPTLH  I  SA+NVVD S  LFK AVS C+S
Sbjct: 77  ETLKENVDAYFNILQGFLLVCHGSMVGAGPTLHKSIYGSAKNVVDSSFSLFKHAVSACES 136

Query: 82  DNANKRQTIPQLSGSVWEACDALKKTP 2
            + ++  TIPQ++G+VWEAC ALKK P
Sbjct: 137 RSPDRNTTIPQVTGTVWEACAALKKVP 163


>gb|AFW79070.1| hypothetical protein ZEAMMB73_982595 [Zea mays]
          Length = 765

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/147 (53%), Positives = 107/147 (72%), Gaps = 3/147 (2%)
 Frame = -3

Query: 433 LARVLDSHIHNIEETLQMLER--PAVSQKVDWLEVTKVGDEISKQATVAGMLWNGE-HDV 263
           L+R L+SH+  I +T QM+    P   ++ +W EV K+GD++S+QATVAGMLW+G+  DV
Sbjct: 406 LSRFLESHLQTISDTFQMMAESAPGALERTEWSEVVKLGDQVSRQATVAGMLWSGDLPDV 465

Query: 262 KNLESNMEVYINLLQGFLLLCHSSSAGAGPTLHACIVASARNVVDRSLKLFKEAVSFCDS 83
           + L+ N+  Y N+LQGFLL+CH S  GAGPTLH  I  SA++VVD S  LFK AVS  +S
Sbjct: 466 ETLKENIVAYFNILQGFLLVCHGSMVGAGPTLHKSIFGSAKDVVDSSFSLFKHAVSAYES 525

Query: 82  DNANKRQTIPQLSGSVWEACDALKKTP 2
            ++++  TIPQ++G+VWEAC ALKK P
Sbjct: 526 RSSDRNTTIPQVTGTVWEACAALKKVP 552


>ref|NP_001132643.2| uncharacterized protein LOC100194118 [Zea mays]
           gi|238908729|gb|ACF81574.2| unknown [Zea mays]
          Length = 376

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/147 (53%), Positives = 107/147 (72%), Gaps = 3/147 (2%)
 Frame = -3

Query: 433 LARVLDSHIHNIEETLQMLER--PAVSQKVDWLEVTKVGDEISKQATVAGMLWNGE-HDV 263
           L+R L+SH+  I +T QM+    P   ++ +W EV K+GD++S+QATVAGMLW+G+  DV
Sbjct: 17  LSRFLESHLQTISDTFQMMAESAPGALERTEWSEVVKLGDQVSRQATVAGMLWSGDLPDV 76

Query: 262 KNLESNMEVYINLLQGFLLLCHSSSAGAGPTLHACIVASARNVVDRSLKLFKEAVSFCDS 83
           + L+ N+  Y N+LQGFLL+CH S  GAGPTLH  I  SA++VVD S  LFK AVS  +S
Sbjct: 77  ETLKENIVAYFNILQGFLLVCHGSMVGAGPTLHKSIFGSAKDVVDSSFSLFKHAVSAYES 136

Query: 82  DNANKRQTIPQLSGSVWEACDALKKTP 2
            ++++  TIPQ++G+VWEAC ALKK P
Sbjct: 137 RSSDRNTTIPQVTGTVWEACAALKKVP 163


>gb|ACG39212.1| hypothetical protein [Zea mays]
          Length = 376

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/147 (53%), Positives = 105/147 (71%), Gaps = 3/147 (2%)
 Frame = -3

Query: 433 LARVLDSHIHNIEETLQMLER--PAVSQKVDWLEVTKVGDEISKQATVAGMLWNGE-HDV 263
           L+R L+SH+  I +T QM+    P    + +W EV K+GD++S+QATVAGMLW+G+  DV
Sbjct: 17  LSRFLESHLQTISDTFQMMAESAPGALDRTEWSEVVKLGDQVSRQATVAGMLWSGDLPDV 76

Query: 262 KNLESNMEVYINLLQGFLLLCHSSSAGAGPTLHACIVASARNVVDRSLKLFKEAVSFCDS 83
           + L+ N+  Y N+LQGFLL+CH S  GAGPTLH  I  SA++VVD S  LFK AVS  +S
Sbjct: 77  ETLKENIVAYFNILQGFLLVCHGSMVGAGPTLHKSIFGSAKDVVDSSFSLFKHAVSAYES 136

Query: 82  DNANKRQTIPQLSGSVWEACDALKKTP 2
            + ++  TIPQ++G+VWEAC ALKK P
Sbjct: 137 RSPDRNTTIPQVTGTVWEACAALKKVP 163


>ref|XP_002280178.1| PREDICTED: cyclin-D1-binding protein 1 homolog [Vitis vinifera]
           gi|297737743|emb|CBI26944.3| unnamed protein product
           [Vitis vinifera]
          Length = 364

 Score =  160 bits (404), Expect = 1e-37
 Identities = 81/153 (52%), Positives = 109/153 (71%), Gaps = 3/153 (1%)
 Frame = -3

Query: 451 RGKKEHLARVLDSHIHNIEETLQMLERPAVS--QKVDWLEVTKVGDEISKQATVAGMLWN 278
           R K+E L+R L+SH++NI ET Q+L++ +     KV W +V ++G+++ KQAT+ GMLW 
Sbjct: 3   RAKREQLSRTLNSHLNNIHETFQVLDQTSSLPLDKVSWDDVIQMGEQVYKQATIVGMLWT 62

Query: 277 GEH-DVKNLESNMEVYINLLQGFLLLCHSSSAGAGPTLHACIVASARNVVDRSLKLFKEA 101
           GE  +V  LE NME Y N+LQGFL L H S+ GAGPTL + I AS + VVD S +L KE+
Sbjct: 63  GEAPEVSALEGNMEAYFNMLQGFLFLSHGSTVGAGPTLSSSIHASVKQVVDSSFRLLKES 122

Query: 100 VSFCDSDNANKRQTIPQLSGSVWEACDALKKTP 2
           VS   S N +++ +IPQL G+VWEAC ALKKTP
Sbjct: 123 VSSYGSRNRDQKLSIPQLVGAVWEACSALKKTP 155


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