BLASTX nr result

ID: Dioscorea21_contig00024600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024600
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533089.1| PREDICTED: probable GMP synthase [glutamine-...    59   5e-07
ref|XP_003530263.1| PREDICTED: probable GMP synthase [glutamine-...    57   1e-06
ref|XP_003604247.1| DNA-3-methyladenine glycosylase I [Medicago ...    57   2e-06
ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_003533089.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Glycine max]
          Length = 375

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
 Frame = +2

Query: 2   VIYSFMQTAGITNDHLISCHRFEECIATQSSTDTGKDVSANNPVTEK-NEKQKEM 163
           VIY+FMQ AG+TNDH+ISC RF+EC  T ++   GK+ S N+ V EK NE+  E+
Sbjct: 309 VIYTFMQVAGLTNDHIISCFRFKEC--TSNAEAMGKESSLNSKVKEKANEEPTEV 361


>ref|XP_003530263.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Glycine max]
          Length = 377

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/51 (52%), Positives = 37/51 (72%)
 Frame = +2

Query: 2   VIYSFMQTAGITNDHLISCHRFEECIATQSSTDTGKDVSANNPVTEKNEKQ 154
           VIY+FMQ AG+TNDH+ISC RF+EC  T ++   GK+ S N+ V EK  ++
Sbjct: 311 VIYTFMQVAGLTNDHIISCFRFKEC--TSNAEAMGKESSLNSKVKEKANEE 359


>ref|XP_003604247.1| DNA-3-methyladenine glycosylase I [Medicago truncatula]
           gi|355505302|gb|AES86444.1| DNA-3-methyladenine
           glycosylase I [Medicago truncatula]
          Length = 534

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +2

Query: 2   VIYSFMQTAGITNDHLISCHRFEECIATQSSTDTGKDVSANNPVTEKNEK 151
           VIY+FMQ AG+TNDHLI C RF+ECI + +  +  +  S N+ V EK+ +
Sbjct: 467 VIYTFMQVAGLTNDHLIGCFRFKECIFSNAEAEGKESSSLNSKVKEKSNE 516


>ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|222865972|gb|EEF03103.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
 Frame = +2

Query: 2   VIYSFMQTAGITNDHLISCHRFEECI-ATQSSTDTG---KDVSANNPVTEK 142
           VIYSFMQ AGITNDHLISC RF+EC+ A +   + G   +D+  N+ +  K
Sbjct: 317 VIYSFMQVAGITNDHLISCFRFQECLDAAEGKVENGIKSEDIKTNDVMESK 367


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