BLASTX nr result

ID: Dioscorea21_contig00024598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024598
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26289.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana] ...   121   7e-26
ref|NP_001189950.1| uncharacterized protein [Arabidopsis thalian...   121   7e-26
ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25

>emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/94 (59%), Positives = 75/94 (79%)
 Frame = +3

Query: 9   LIESMPMEANDVIWRALLSASRVHHNIKMAEYAANQLSTSAPEQTGAHILLSNAYASVER 188
           LI+SMPME NDV+W +LL+A RVH N++MA YAA +++  AP++ G H+LLSN YAS  +
Sbjct: 455 LIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGK 514

Query: 189 WQDVAKVRMYLKEKGFQKPTGSSLIQVHGVIHEF 290
           W DVA+VR+ L+EKG +K  GSS +QV+GVIHEF
Sbjct: 515 WTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEF 548


>ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/94 (59%), Positives = 75/94 (79%)
 Frame = +3

Query: 9   LIESMPMEANDVIWRALLSASRVHHNIKMAEYAANQLSTSAPEQTGAHILLSNAYASVER 188
           LI+SMPME NDV+W +LL+A RVH N++MA YAA +++  AP++ G H+LLSN YAS  +
Sbjct: 623 LIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGK 682

Query: 189 WQDVAKVRMYLKEKGFQKPTGSSLIQVHGVIHEF 290
           W DVA+VR+ L+EKG +K  GSS +QV+GVIHEF
Sbjct: 683 WTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEF 716


>ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332643144|gb|AEE76665.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 938

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/94 (59%), Positives = 72/94 (76%)
 Frame = +3

Query: 9   LIESMPMEANDVIWRALLSASRVHHNIKMAEYAANQLSTSAPEQTGAHILLSNAYASVER 188
           LIE MPME NDVIW +LL+A RV  N++MA YAA ++   APE+TG+++LLSN YAS  R
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688

Query: 189 WQDVAKVRMYLKEKGFQKPTGSSLIQVHGVIHEF 290
           W D+AKVR+ +KEKG +KP G+S IQ+ G  HEF
Sbjct: 689 WNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEF 722


>ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22690 gi|9279687|dbj|BAB01244.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643145|gb|AEE76666.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 842

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/94 (59%), Positives = 72/94 (76%)
 Frame = +3

Query: 9   LIESMPMEANDVIWRALLSASRVHHNIKMAEYAANQLSTSAPEQTGAHILLSNAYASVER 188
           LIE MPME NDVIW +LL+A RV  N++MA YAA ++   APE+TG+++LLSN YAS  R
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688

Query: 189 WQDVAKVRMYLKEKGFQKPTGSSLIQVHGVIHEF 290
           W D+AKVR+ +KEKG +KP G+S IQ+ G  HEF
Sbjct: 689 WNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEF 722


>ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/94 (58%), Positives = 73/94 (77%)
 Frame = +3

Query: 9   LIESMPMEANDVIWRALLSASRVHHNIKMAEYAANQLSTSAPEQTGAHILLSNAYASVER 188
           LI+SMP+E NDV+W +LL+A R H N+++A YAA +L+  APE+ G H+LLSN YAS  +
Sbjct: 623 LIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGK 682

Query: 189 WQDVAKVRMYLKEKGFQKPTGSSLIQVHGVIHEF 290
           W DVA+VR+ +KEKG QK  GSS I+V G+IHEF
Sbjct: 683 WTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEF 716


Top