BLASTX nr result

ID: Dioscorea21_contig00024594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024594
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM63715.1| unknown [Arabidopsis thaliana]                          81   1e-13
emb|CAB87718.1| putative protein [Arabidopsis thaliana]                77   1e-12
ref|NP_568250.1| regulator of chromosome condensation repeat-con...    77   1e-12
ref|XP_002516507.1| Protein pim1, putative [Ricinus communis] gi...    77   1e-12
ref|XP_002871480.1| hypothetical protein ARALYDRAFT_487995 [Arab...    77   2e-12

>gb|AAM63715.1| unknown [Arabidopsis thaliana]
          Length = 553

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/55 (67%), Positives = 43/55 (78%)
 Frame = -3

Query: 226 KVVQIAAGEAHTLALAGDGSVLSWGRGTFGRLGTGKEHDEHSPVRVYFPDASSKE 62
           K++ +AAGEAHT+AL GDG V SWGRG FGRLGTGKE DE  PVRV FP+ +  E
Sbjct: 17  KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVRVEFPNQAEGE 71


>emb|CAB87718.1| putative protein [Arabidopsis thaliana]
          Length = 541

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = -3

Query: 226 KVVQIAAGEAHTLALAGDGSVLSWGRGTFGRLGTGKEHDEHSPVRVYFPDASSKELTSDP 47
           K++ +AAGEAHT+AL GDG V SWGRG FGRLGTGKE DE  PV V FP+ +  +     
Sbjct: 17  KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIV 76

Query: 46  SVPSG 32
            V +G
Sbjct: 77  GVAAG 81


>ref|NP_568250.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana] gi|16604485|gb|AAL24248.1|
           AT5g11580/F15N18_170 [Arabidopsis thaliana]
           gi|18958034|gb|AAL79590.1| AT5g11580/F15N18_170
           [Arabidopsis thaliana] gi|332004314|gb|AED91697.1|
           regulator of chromosome condensation repeat-containing
           protein [Arabidopsis thaliana]
          Length = 553

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = -3

Query: 226 KVVQIAAGEAHTLALAGDGSVLSWGRGTFGRLGTGKEHDEHSPVRVYFPDASSKELTSDP 47
           K++ +AAGEAHT+AL GDG V SWGRG FGRLGTGKE DE  PV V FP+ +  +     
Sbjct: 17  KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIV 76

Query: 46  SVPSG 32
            V +G
Sbjct: 77  GVAAG 81


>ref|XP_002516507.1| Protein pim1, putative [Ricinus communis]
           gi|223544327|gb|EEF45848.1| Protein pim1, putative
           [Ricinus communis]
          Length = 565

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/48 (77%), Positives = 39/48 (81%)
 Frame = -3

Query: 226 KVVQIAAGEAHTLALAGDGSVLSWGRGTFGRLGTGKEHDEHSPVRVYF 83
           KVV +AAGEAHTLAL GDG V SWGRGTFGRLGTG E DE  PV+V F
Sbjct: 17  KVVSVAAGEAHTLALTGDGCVYSWGRGTFGRLGTGLEKDELYPVKVKF 64


>ref|XP_002871480.1| hypothetical protein ARALYDRAFT_487995 [Arabidopsis lyrata subsp.
           lyrata] gi|297317317|gb|EFH47739.1| hypothetical protein
           ARALYDRAFT_487995 [Arabidopsis lyrata subsp. lyrata]
          Length = 554

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = -3

Query: 226 KVVQIAAGEAHTLALAGDGSVLSWGRGTFGRLGTGKEHDEHSPVRVYF 83
           K++ +AAGEAHT+AL GDG V SWGRG FGRLGTGKE DE  PVRV F
Sbjct: 17  KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVRVEF 64


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