BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024586
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi...   187   8e-46
emb|CBI26347.3| unnamed protein product [Vitis vinifera]              187   8e-46
ref|XP_002885540.1| pentatricopeptide repeat-containing protein ...   178   4e-43
ref|NP_188942.1| pentatricopeptide repeat-containing protein [Ar...   172   3e-41
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...   172   3e-41

>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
           [Vitis vinifera]
          Length = 881

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/123 (70%), Positives = 100/123 (81%)
 Frame = -3

Query: 374 TKSPLKWGSYGGCIPSILVALETFVDLDDAFEPWEGNLSCKERTIILKEQTNWRRALSIF 195
           T    KW SYGGCIPSIL ALET  DLD+A  PWE +LS KER+IILKEQ+ W RAL IF
Sbjct: 124 TNCSTKWLSYGGCIPSILRALETVKDLDEALSPWEESLSNKERSIILKEQSCWERALEIF 183

Query: 194 DWFKNKGCYELNVIHYNVMLKILGRAQRWDHVRNLWREMQSKCITPTNSTYGTLIDVFSK 15
           +W K KGCYELNVIHYN+ML+ILG+A++W HV +LW EM S+ ITP NSTYGTLIDV+SK
Sbjct: 184 EWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSK 243

Query: 14  GGL 6
           GGL
Sbjct: 244 GGL 246


>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/123 (70%), Positives = 100/123 (81%)
 Frame = -3

Query: 374 TKSPLKWGSYGGCIPSILVALETFVDLDDAFEPWEGNLSCKERTIILKEQTNWRRALSIF 195
           T    KW SYGGCIPSIL ALET  DLD+A  PWE +LS KER+IILKEQ+ W RAL IF
Sbjct: 124 TNCSTKWLSYGGCIPSILRALETVKDLDEALSPWEESLSNKERSIILKEQSCWERALEIF 183

Query: 194 DWFKNKGCYELNVIHYNVMLKILGRAQRWDHVRNLWREMQSKCITPTNSTYGTLIDVFSK 15
           +W K KGCYELNVIHYN+ML+ILG+A++W HV +LW EM S+ ITP NSTYGTLIDV+SK
Sbjct: 184 EWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGTLIDVYSK 243

Query: 14  GGL 6
           GGL
Sbjct: 244 GGL 246


>ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331380|gb|EFH61799.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 841

 Score =  178 bits (452), Expect = 4e-43
 Identities = 93/166 (56%), Positives = 111/166 (66%), Gaps = 6/166 (3%)
 Frame = -3

Query: 485 NSIFLNPRIAGIRCRNHSKIPNFVPASSSYGGFSCK------QTKSPLKWGSYGGCIPSI 324
           N +F+NP    +     S    FV   S  GGF          TK   K  SYGGCIP+I
Sbjct: 73  NLLFVNPGNGSVGKSGFSY--GFVDRRSKDGGFGGNGMVGKVHTKCSTKRLSYGGCIPAI 130

Query: 323 LVALETFVDLDDAFEPWEGNLSCKERTIILKEQTNWRRALSIFDWFKNKGCYELNVIHYN 144
           L AL+   D++DA  PW   LS KERTIILKEQT W RA+ IF+WFK+KGCYELNVIHYN
Sbjct: 131 LEALDCIEDVEDALSPWSEKLSNKERTIILKEQTRWERAVEIFEWFKSKGCYELNVIHYN 190

Query: 143 VMLKILGRAQRWDHVRNLWREMQSKCITPTNSTYGTLIDVFSKGGL 6
           +ML+ILG+A +W +V++LW EM  K I P NSTYGTLIDV+SKGGL
Sbjct: 191 IMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGL 236


>ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g23020 gi|9294191|dbj|BAB02093.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643185|gb|AEE76706.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 842

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/123 (65%), Positives = 98/123 (79%)
 Frame = -3

Query: 374 TKSPLKWGSYGGCIPSILVALETFVDLDDAFEPWEGNLSCKERTIILKEQTNWRRALSIF 195
           TK   K  SYGGCIP+IL AL++  D++DA  PW   LS KERTIILKEQ +W RA+ IF
Sbjct: 115 TKCSTKRLSYGGCIPAILEALDSIEDVEDALSPWAERLSNKERTIILKEQIHWERAVEIF 174

Query: 194 DWFKNKGCYELNVIHYNVMLKILGRAQRWDHVRNLWREMQSKCITPTNSTYGTLIDVFSK 15
           +WFK+KGCYELNVIHYN+ML+ILG+A +W +V++LW EM  K I P NSTYGTLIDV+SK
Sbjct: 175 EWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSK 234

Query: 14  GGL 6
           GGL
Sbjct: 235 GGL 237


>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score =  172 bits (435), Expect = 3e-41
 Identities = 79/124 (63%), Positives = 100/124 (80%)
 Frame = -3

Query: 377 QTKSPLKWGSYGGCIPSILVALETFVDLDDAFEPWEGNLSCKERTIILKEQTNWRRALSI 198
           +TK   KW +YGG IPSIL ALET  +LD+A +PWE  LS KER+IILKEQ +W RA+ I
Sbjct: 131 RTKCSTKWVNYGGSIPSILEALETIKNLDEALKPWEDTLSNKERSIILKEQCSWERAMEI 190

Query: 197 FDWFKNKGCYELNVIHYNVMLKILGRAQRWDHVRNLWREMQSKCITPTNSTYGTLIDVFS 18
           F+WFK++GCYELNVIHYN+M++ILG+A++W ++  L  EM  K I+P NSTYGTLIDV+S
Sbjct: 191 FEWFKSRGCYELNVIHYNIMIRILGKAKQWRYLECLCNEMSFKRISPINSTYGTLIDVYS 250

Query: 17  KGGL 6
           KGGL
Sbjct: 251 KGGL 254