BLASTX nr result

ID: Dioscorea21_contig00024584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024584
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD66518.1| RNA-binding protein [Gymnadenia conopsea]              126   8e-43
ref|XP_002308274.1| predicted protein [Populus trichocarpa] gi|2...   130   3e-42
ref|XP_002280767.1| PREDICTED: uncharacterized protein LOC100252...   130   4e-42
emb|CBI27867.3| unnamed protein product [Vitis vinifera]              130   4e-42
ref|XP_002514090.1| Cell growth-regulating nucleolar protein, pu...   127   2e-41

>gb|ABD66518.1| RNA-binding protein [Gymnadenia conopsea]
          Length = 313

 Score =  126 bits (317), Expect(2) = 8e-43
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = +1

Query: 25  MVWFQCEDCGENLKKPKLPNHFRICSAFKLSCIDCGKVFDQQSVQSHTQCISEAEKYGPK 204
           MVWFQCE CGENLKKPKLPNHFRICSA KLSCIDCG +F ++SVQSHTQC++EAEKYGPK
Sbjct: 1   MVWFQCEACGENLKKPKLPNHFRICSAHKLSCIDCGDLFSKESVQSHTQCMTEAEKYGPK 60

Query: 205 DQGKAS 222
           D GK S
Sbjct: 61  DHGKPS 66



 Score = 72.4 bits (176), Expect(2) = 8e-43
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = +3

Query: 312 EVDVNVGLSSHPPWFCSLCNTNTTSKQTLLLHADG 416
           +VD+N+GLSSHPPWFCSLCNT  TSKQTLLLHADG
Sbjct: 81  DVDINIGLSSHPPWFCSLCNTPATSKQTLLLHADG 115


>ref|XP_002308274.1| predicted protein [Populus trichocarpa] gi|222854250|gb|EEE91797.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  130 bits (326), Expect(2) = 3e-42
 Identities = 57/66 (86%), Positives = 61/66 (92%)
 Frame = +1

Query: 25  MVWFQCEDCGENLKKPKLPNHFRICSAFKLSCIDCGKVFDQQSVQSHTQCISEAEKYGPK 204
           MVWFQCEDCGENLKKPKLPNHFR+CSA KLSCIDCG+ F +QSVQ HTQCI+EAEKYGPK
Sbjct: 1   MVWFQCEDCGENLKKPKLPNHFRMCSATKLSCIDCGETFGKQSVQGHTQCITEAEKYGPK 60

Query: 205 DQGKAS 222
            QGKAS
Sbjct: 61  GQGKAS 66



 Score = 67.0 bits (162), Expect(2) = 3e-42
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 312 EVDVNVGLSSHPPWFCSLCNTNTTSKQTLLLHADG 416
           +VD+NVGLS  PPWFCSLCNT  TSKQ LLLHADG
Sbjct: 82  DVDINVGLSERPPWFCSLCNTKATSKQALLLHADG 116


>ref|XP_002280767.1| PREDICTED: uncharacterized protein LOC100252615 [Vitis vinifera]
          Length = 325

 Score =  130 bits (328), Expect(2) = 4e-42
 Identities = 58/65 (89%), Positives = 60/65 (92%)
 Frame = +1

Query: 25  MVWFQCEDCGENLKKPKLPNHFRICSAFKLSCIDCGKVFDQQSVQSHTQCISEAEKYGPK 204
           MVWFQCEDCGENLKKPKLPNHFRICSA KLSCIDCG+ F QQSVQ HTQCI+EAEKYGPK
Sbjct: 1   MVWFQCEDCGENLKKPKLPNHFRICSANKLSCIDCGETFGQQSVQGHTQCITEAEKYGPK 60

Query: 205 DQGKA 219
            QGKA
Sbjct: 61  GQGKA 65



 Score = 65.9 bits (159), Expect(2) = 4e-42
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = +3

Query: 312 EVDVNVGLSSHPPWFCSLCNTNTTSKQTLLLHADG 416
           EVD+ VGLS  PPWFCSLCNT  TSKQ LLLHADG
Sbjct: 82  EVDITVGLSERPPWFCSLCNTKATSKQALLLHADG 116


>emb|CBI27867.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  130 bits (328), Expect(2) = 4e-42
 Identities = 58/65 (89%), Positives = 60/65 (92%)
 Frame = +1

Query: 25  MVWFQCEDCGENLKKPKLPNHFRICSAFKLSCIDCGKVFDQQSVQSHTQCISEAEKYGPK 204
           MVWFQCEDCGENLKKPKLPNHFRICSA KLSCIDCG+ F QQSVQ HTQCI+EAEKYGPK
Sbjct: 1   MVWFQCEDCGENLKKPKLPNHFRICSANKLSCIDCGETFGQQSVQGHTQCITEAEKYGPK 60

Query: 205 DQGKA 219
            QGKA
Sbjct: 61  GQGKA 65



 Score = 65.9 bits (159), Expect(2) = 4e-42
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = +3

Query: 312 EVDVNVGLSSHPPWFCSLCNTNTTSKQTLLLHADG 416
           EVD+ VGLS  PPWFCSLCNT  TSKQ LLLHADG
Sbjct: 82  EVDITVGLSERPPWFCSLCNTKATSKQALLLHADG 116


>ref|XP_002514090.1| Cell growth-regulating nucleolar protein, putative [Ricinus
           communis] gi|223546546|gb|EEF48044.1| Cell
           growth-regulating nucleolar protein, putative [Ricinus
           communis]
          Length = 312

 Score =  127 bits (319), Expect(2) = 2e-41
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = +1

Query: 25  MVWFQCEDCGENLKKPKLPNHFRICSAFKLSCIDCGKVFDQQSVQSHTQCISEAEKYGPK 204
           MVWFQCEDCGENLKKPKLPNHFRICSA KLSCIDCG++F Q  VQ HTQCI+EAEKYGPK
Sbjct: 1   MVWFQCEDCGENLKKPKLPNHFRICSATKLSCIDCGEMFGQDRVQGHTQCITEAEKYGPK 60

Query: 205 DQGKAS 222
            QGK S
Sbjct: 61  GQGKIS 66



 Score = 67.0 bits (162), Expect(2) = 2e-41
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +3

Query: 312 EVDVNVGLSSHPPWFCSLCNTNTTSKQTLLLHADG 416
           +VD+ VGLS  PPWFCSLCNT+ TSKQTLLLHADG
Sbjct: 81  DVDITVGLSDRPPWFCSLCNTSATSKQTLLLHADG 115


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