BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024564
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD40062.3| OSJNBa0085C10.14 [Oryza sativa Japonica Group]         75   4e-17
gb|ABA98544.1| retrotransposon protein, putative, Ty3-gypsy subc...    77   6e-17
emb|CAE04199.2| OSJNBa0011E07.8 [Oryza sativa Japonica Group]          77   8e-17
gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group...    77   3e-16
gb|AAT81688.1| putative retrotransposon protein [Oryza sativa Ja...    74   5e-16

>emb|CAD40062.3| OSJNBa0085C10.14 [Oryza sativa Japonica Group]
          Length = 756

 Score = 75.1 bits (183), Expect(2) = 4e-17
 Identities = 32/39 (82%), Positives = 37/39 (94%)
 Frame = +1

Query: 136 QKELNMRQRRWLELIKDYDLSVHYHPGKANVVADALSRR 252
           Q +LNMRQR+WLELIKDYD+ +HYHPGKANVVADALSR+
Sbjct: 378 QPDLNMRQRKWLELIKDYDMGIHYHPGKANVVADALSRK 416



 Score = 37.7 bits (86), Expect(2) = 4e-17
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +3

Query: 36  LKHRLLSAPVLALPESGRGFVIYSDVCMTGLVCP 137
           LK RL+SAP+L LP+  +GF +Y D    GL  P
Sbjct: 305 LKSRLISAPILILPDPKKGFQVYCDASKLGLGYP 338


>gb|ABA98544.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1112

 Score = 76.6 bits (187), Expect(2) = 6e-17
 Identities = 33/39 (84%), Positives = 38/39 (97%)
 Frame = +1

Query: 136 QKELNMRQRRWLELIKDYDLSVHYHPGKANVVADALSRR 252
           Q +LN+RQRRWLELIKDYD+S+HYHPGKANVVADALSR+
Sbjct: 631 QPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRK 669



 Score = 35.4 bits (80), Expect(2) = 6e-17
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +3

Query: 36  LKHRLLSAPVLALPESGRGFVIYSDVCMTGLVC 134
           LK +L+SAPVL LP+  + F +Y D    GL C
Sbjct: 567 LKKKLVSAPVLILPDQTKDFQVYCDASRHGLGC 599


>emb|CAE04199.2| OSJNBa0011E07.8 [Oryza sativa Japonica Group]
          Length = 1251

 Score = 76.6 bits (187), Expect(2) = 8e-17
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = +1

Query: 136 QKELNMRQRRWLELIKDYDLSVHYHPGKANVVADALSRR 252
           Q +LN+RQRRWLELIKDYDL VHYHPGKANVVADALSR+
Sbjct: 728 QSDLNLRQRRWLELIKDYDLKVHYHPGKANVVADALSRK 766



 Score = 35.0 bits (79), Expect(2) = 8e-17
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +3

Query: 36  LKHRLLSAPVLALPESGRGFVIYSDVCMTGL 128
           LK +L SAP+L LP+  + FVIY D    GL
Sbjct: 681 LKEKLTSAPILVLPDIRKDFVIYCDASRQGL 711


>gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711716|gb|ABF99511.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1312

 Score = 76.6 bits (187), Expect(2) = 3e-16
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = +1

Query: 136 QKELNMRQRRWLELIKDYDLSVHYHPGKANVVADALSRR 252
           Q +LN+RQRRWLELIKDYDL VHYHPGKANVVADALSR+
Sbjct: 792 QSDLNLRQRRWLELIKDYDLEVHYHPGKANVVADALSRK 830



 Score = 33.1 bits (74), Expect(2) = 3e-16
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 36  LKHRLLSAPVLALPESGRGFVIYSDVCMTGL 128
           LK +L SAP+L LP+  + FVIY +    GL
Sbjct: 734 LKEKLTSAPILVLPDIRKDFVIYCNASRQGL 764


>gb|AAT81688.1| putative retrotransposon protein [Oryza sativa Japonica Group]
          Length = 1278

 Score = 73.9 bits (180), Expect(2) = 5e-16
 Identities = 32/40 (80%), Positives = 37/40 (92%)
 Frame = +1

Query: 133  AQKELNMRQRRWLELIKDYDLSVHYHPGKANVVADALSRR 252
            A  +LN+RQRRWLELIKDYD+ +HYHPGKANVVADALSR+
Sbjct: 1030 AVSDLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRK 1069



 Score = 35.0 bits (79), Expect(2) = 5e-16
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = +3

Query: 36   LKHRLLSAPVLALPESGRGFVIYSDVCMTGLVC 134
            LK +L+S+PVL LP++ + F++Y +    GL C
Sbjct: 966  LKEKLVSSPVLILPDTRKDFLVYCEASRQGLGC 998