BLASTX nr result

ID: Dioscorea21_contig00024562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024562
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547997.1| PREDICTED: UPF0496 protein At2g18630-like [G...    61   3e-07
ref|XP_003518049.1| PREDICTED: UPF0496 protein At2g18630-like [G...    58   2e-06
ref|XP_004148443.1| PREDICTED: UPF0496 protein At2g18630-like [C...    57   5e-06
ref|NP_001145902.1| hypothetical protein [Zea mays] gi|219884887...    56   9e-06

>ref|XP_003547997.1| PREDICTED: UPF0496 protein At2g18630-like [Glycine max]
          Length = 376

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
 Frame = -2

Query: 582 GQPPTVSFIEDYLKTSIQTLDFFSLLDERIREAHSTVYLANRVVYLFK----TGSPALAV 415
           G     S + DY   S+QTL+F + L++ +R A     +   VV  F+     G+  +  
Sbjct: 101 GNSELFSLVNDYFNNSLQTLEFCNSLEKCLRRARENQMIVKSVVTYFEEEGQNGADGVTY 160

Query: 414 LKDLEDLRKQGNHFQPFPKTTEVELQRLCELHRSRIQKLLERQQVRDKKHSKVEQWKRVL 235
           +K L++L+K  +   PF +   +  Q +     S +QKL  R++  DKK   ++ WKRV 
Sbjct: 161 VKTLQELKKFKDARDPFTEEFYLLFQSVYAQQASMLQKLQIRKRKLDKKLKSLKTWKRVS 220

Query: 234 SWIGLVGIGLLFISSTVLA 178
           + I +     + I S V A
Sbjct: 221 NVIFVAAFVSVLIFSVVAA 239


>ref|XP_003518049.1| PREDICTED: UPF0496 protein At2g18630-like [Glycine max]
          Length = 376

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
 Frame = -2

Query: 582 GQPPTVSFIEDYLKTSIQTLDFFSLLDERIREAHSTVYLANRVVYLFK----TGSPALAV 415
           G     S + DY   S+ TL+F + L++ +R+A     +   VV  F+     G+  +  
Sbjct: 101 GNSELFSLVNDYFDNSLHTLEFCNSLEKCLRQARENQMIVKSVVTYFEEEVQNGAEGVTY 160

Query: 414 LKDLEDLRKQGNHFQPFPKTTEVELQRLCELHRSRIQKLLERQQVRDKKHSKVEQWKRVL 235
           +K L++L+K  +   PF +   +  Q +     S +QKL  R++  DKK   ++ W+RV 
Sbjct: 161 VKTLQELKKFKDAGDPFTEEFYLLFQSVYTQQASMLQKLQIRKRKLDKKLKSLKTWRRVS 220

Query: 234 SWIGLVGIGLLFISSTVLA 178
           + I +     + I S V A
Sbjct: 221 NAIFVAAFVSVLIFSVVAA 239


>ref|XP_004148443.1| PREDICTED: UPF0496 protein At2g18630-like [Cucumis sativus]
           gi|449527386|ref|XP_004170692.1| PREDICTED: UPF0496
           protein At2g18630-like [Cucumis sativus]
          Length = 378

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
 Frame = -2

Query: 564 SFIEDYLKTSIQTLDFFSLLDERIREAHSTVYLANRVVYLFKT---GSPALAVLKDLEDL 394
           S +E +   S++ L+F   L+E +R    + ++    V  F++   G      +K  EDL
Sbjct: 109 SLVEAFFDNSLKVLEFSKALEESLRRTRDSQFIIKLAVKKFESDENGDNGERYVKTFEDL 168

Query: 393 RKQGNHFQPFPKTTEVELQRLCELHRSRIQKLLERQQVRDKKHSKVEQWKRVLSWIGLVG 214
           +K      PF +      + L + H S  +KL  +++  DKK+S +E WK V + I +  
Sbjct: 169 KKFQEAGDPFGEEFVTLFRSLYKEHLSMFKKLQHQKKKLDKKYSTMETWKTVSNVILVTA 228

Query: 213 IGLLFISSTVLAIMT 169
              + I S V A M+
Sbjct: 229 FASVLIFSVVAAAMS 243


>ref|NP_001145902.1| hypothetical protein [Zea mays] gi|219884887|gb|ACL52818.1| unknown
           [Zea mays] gi|413956699|gb|AFW89348.1| hypothetical
           protein ZEAMMB73_728470 [Zea mays]
          Length = 372

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
 Frame = -2

Query: 576 PPTVSFIEDYLKTSIQTLDFFSLLDERIREAHSTVYLANRVVYLFK--------TGSPAL 421
           P     +EDY ++S+QTLDF + LD+ ++ A  +  L +  +  F           +P+ 
Sbjct: 95  PELFDLVEDYFESSLQTLDFCTALDKCLKRARDSQLLLHVALQRFDDEEDIDAAAAAPSA 154

Query: 420 AVLKDLEDLRKQGNHFQPFPKTTEVELQRLCELHRSRIQKLLERQQVRDKKHSKVEQWKR 241
              + L +LR+      PF        Q +     + ++KL +R+   DKK   ++ W+R
Sbjct: 155 RYARTLHELRQFKTAGDPFTDEFFAAFQAVYRQQLAMLEKLQQRKHRLDKKVKTIKAWRR 214

Query: 240 VLSWIGLVGIGLLFISSTVLA 178
           V S I       + I S V A
Sbjct: 215 VSSIIFATTFAAVLICSVVAA 235


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