BLASTX nr result

ID: Dioscorea21_contig00024561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024561
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   149   2e-34
emb|CBI22273.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   149   2e-34
ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] ...   140   1e-31
gb|AAR88654.1| rRNA methylase-like protein [Viscum album]             139   2e-31

>ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis
           vinifera]
          Length = 372

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/121 (62%), Positives = 89/121 (73%), Gaps = 7/121 (5%)
 Frame = +3

Query: 3   DTVEQLLTDTNGIERLMKMDRRRFP-------ESNRWFPYLDVFRVGSMALRSGEVIQAL 161
           D VE LLT+T+ + RLMKM+RR          +S RWFPYLD F+ G+  L S E+++A+
Sbjct: 94  DIVEHLLTNTDDVGRLMKMERRSMTGDGGELIQSKRWFPYLDKFKTGTTFLSSSEILEAM 153

Query: 162 DPYIQDARKERMRQAVAGRSYSVCLVVEGLSDFGNVSAAFRSADALGIQSVHVISPDSRK 341
           DPYI + RKER R  V  RSYSVCLVVEGL DFGNVSAAFRSADALG QSVHV+S DS K
Sbjct: 154 DPYIMEVRKERFRNVVKSRSYSVCLVVEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSK 213

Query: 342 R 344
           R
Sbjct: 214 R 214


>emb|CBI22273.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/121 (62%), Positives = 89/121 (73%), Gaps = 7/121 (5%)
 Frame = +3

Query: 3   DTVEQLLTDTNGIERLMKMDRRRFP-------ESNRWFPYLDVFRVGSMALRSGEVIQAL 161
           D VE LLT+T+ + RLMKM+RR          +S RWFPYLD F+ G+  L S E+++A+
Sbjct: 91  DIVEHLLTNTDDVGRLMKMERRSMTGDGGELIQSKRWFPYLDKFKTGTTFLSSSEILEAM 150

Query: 162 DPYIQDARKERMRQAVAGRSYSVCLVVEGLSDFGNVSAAFRSADALGIQSVHVISPDSRK 341
           DPYI + RKER R  V  RSYSVCLVVEGL DFGNVSAAFRSADALG QSVHV+S DS K
Sbjct: 151 DPYIMEVRKERFRNVVKSRSYSVCLVVEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSK 210

Query: 342 R 344
           R
Sbjct: 211 R 211


>ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like
           [Cucumis sativus]
          Length = 370

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/121 (62%), Positives = 89/121 (73%), Gaps = 7/121 (5%)
 Frame = +3

Query: 3   DTVEQLLTDTNGIERLMKMDRR-------RFPESNRWFPYLDVFRVGSMALRSGEVIQAL 161
           DTVE LLT +N + RLMKM+RR        +P   RWFPYLD +  GS  L SGE+++AL
Sbjct: 89  DTVEHLLTHSNDVARLMKMERRSVELDGAEYPHKGRWFPYLDKYSCGSSWLNSGEILEAL 148

Query: 162 DPYIQDARKERMRQAVAGRSYSVCLVVEGLSDFGNVSAAFRSADALGIQSVHVISPDSRK 341
           D  I D+RKER +  V  RSYSVCLVVEGL+DFGNVSAAFRSADALG QSVHV+S D+ K
Sbjct: 149 DSLILDSRKERFKNVVRNRSYSVCLVVEGLTDFGNVSAAFRSADALGFQSVHVVSCDASK 208

Query: 342 R 344
           R
Sbjct: 209 R 209


>ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis]
           gi|223527332|gb|EEF29478.1| rRNA methylase, putative
           [Ricinus communis]
          Length = 334

 Score =  140 bits (352), Expect = 1e-31
 Identities = 73/116 (62%), Positives = 87/116 (75%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3   DTVEQLLTDTNGIERLMKMDRRRFPESN--RWFPYLDVFRVGSMALRSGEVIQALDPYIQ 176
           +TVE LL++ + + RLMKM+RR   E +  RWFPYLD ++ GS  L   EV++A+ PYI 
Sbjct: 61  ETVEHLLSNRDDVLRLMKMERRPDAEKSGSRWFPYLDRYKCGSGELSGSEVLEAVGPYIM 120

Query: 177 DARKERMRQAVAGRSYSVCLVVEGLSDFGNVSAAFRSADALGIQSVHVISPDSRKR 344
           + RKER    V  RSYSVCLVVEGLSDFGNVSAAFRSADALG QSVHV+S DS KR
Sbjct: 121 EDRKERFANVVKNRSYSVCLVVEGLSDFGNVSAAFRSADALGFQSVHVVSCDSSKR 176


>gb|AAR88654.1| rRNA methylase-like protein [Viscum album]
          Length = 368

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/115 (59%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   DTVEQLLTDTNGIERLMKMDRR-RFPESNRWFPYLDVFRVGSMALRSGEVIQALDPYIQD 179
           +TVE+LL+D   ++R+MKM+R+    E  RWFPYLD+F+ G++ L S E+++ALDP+I  
Sbjct: 96  ETVEKLLSDRTNVDRMMKMERKLEATEHTRWFPYLDMFKAGNIDLSSSEILEALDPFILG 155

Query: 180 ARKERMRQAVAGRSYSVCLVVEGLSDFGNVSAAFRSADALGIQSVHVISPDSRKR 344
           +RKER++  V  RSYSV LVVEG +DFGN+SA FRSADALG+QSVHVIS  S KR
Sbjct: 156 SRKERIKDVVKNRSYSVWLVVEGATDFGNISAVFRSADALGLQSVHVISCGSSKR 210


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