BLASTX nr result

ID: Dioscorea21_contig00024559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024559
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266488.1| PREDICTED: proteasome subunit beta type-6 [V...   126   2e-27
ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [...   124   6e-27
emb|CBI20801.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [V...   121   7e-26
ref|NP_001031759.1| proteasome subunit beta type-6 [Arabidopsis ...   120   9e-26

>ref|XP_002266488.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
           gi|297736018|emb|CBI24056.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/72 (86%), Positives = 67/72 (93%)
 Frame = +3

Query: 3   SKEEAENLVVKAVSLAIARDGASGGVVRTVIINADGVTRNFYPGDTLPLWHEELEAQNSL 182
           +K+EAE LVVKAVSLAIARDGASGGVVRTV IN++GVT+NFYPGDTLPLWHEELE QNSL
Sbjct: 159 TKDEAEKLVVKAVSLAIARDGASGGVVRTVTINSEGVTKNFYPGDTLPLWHEELEPQNSL 218

Query: 183 LDILSSDSPVPM 218
           LDILSS SP PM
Sbjct: 219 LDILSSSSPEPM 230


>ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
           gi|223532621|gb|EEF34407.1| proteasome subunit beta type
           6,9, putative [Ricinus communis]
          Length = 231

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/73 (82%), Positives = 69/73 (94%)
 Frame = +3

Query: 3   SKEEAENLVVKAVSLAIARDGASGGVVRTVIINADGVTRNFYPGDTLPLWHEELEAQNSL 182
           +K+EAE LVVKAVSLA+ARDGASGGVVRTVIIN++GVTRNFYPGD+LPLWHEELE QNSL
Sbjct: 158 TKDEAEQLVVKAVSLAMARDGASGGVVRTVIINSEGVTRNFYPGDSLPLWHEELEPQNSL 217

Query: 183 LDILSSDSPVPMS 221
           LDIL++ SP PM+
Sbjct: 218 LDILNASSPEPMN 230


>emb|CBI20801.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/73 (79%), Positives = 67/73 (91%)
 Frame = +3

Query: 3   SKEEAENLVVKAVSLAIARDGASGGVVRTVIINADGVTRNFYPGDTLPLWHEELEAQNSL 182
           +K+EAE LVVKAVSLAIARDGASGGV+RTVIIN++GVTRNFYPGD+LPLWHEEL  QNSL
Sbjct: 150 TKDEAEQLVVKAVSLAIARDGASGGVIRTVIINSEGVTRNFYPGDSLPLWHEELPPQNSL 209

Query: 183 LDILSSDSPVPMS 221
           L++L S SP PM+
Sbjct: 210 LELLHSSSPEPMN 222


>ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
          Length = 231

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/73 (79%), Positives = 67/73 (91%)
 Frame = +3

Query: 3   SKEEAENLVVKAVSLAIARDGASGGVVRTVIINADGVTRNFYPGDTLPLWHEELEAQNSL 182
           +K+EAE LVVKAVSLAIARDGASGGV+RTVIIN++GVTRNFYPGD+LPLWHEEL  QNSL
Sbjct: 158 TKDEAEQLVVKAVSLAIARDGASGGVIRTVIINSEGVTRNFYPGDSLPLWHEELPPQNSL 217

Query: 183 LDILSSDSPVPMS 221
           L++L S SP PM+
Sbjct: 218 LELLHSSSPEPMN 230


>ref|NP_001031759.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
           gi|332660488|gb|AEE85888.1| proteasome subunit beta
           type-6 [Arabidopsis thaliana]
          Length = 234

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/73 (82%), Positives = 66/73 (90%)
 Frame = +3

Query: 3   SKEEAENLVVKAVSLAIARDGASGGVVRTVIINADGVTRNFYPGDTLPLWHEELEAQNSL 182
           +KEEAE LVVKAVSLAIARDGASGGVVRTVIIN++GVTRNFYPGD L LWHEELE QNSL
Sbjct: 161 TKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSL 220

Query: 183 LDILSSDSPVPMS 221
           LDIL++  P PM+
Sbjct: 221 LDILNAAGPEPMA 233


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