BLASTX nr result

ID: Dioscorea21_contig00024554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024554
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447239.1| hypothetical protein SORBIDRAFT_06g031100 [S...   100   1e-19
ref|NP_001054106.2| Os04g0653300 [Oryza sativa Japonica Group] g...    99   5e-19
emb|CAE01546.1| OSJNBb0022F16.1 [Oryza sativa Japonica Group] gi...    99   5e-19
gb|EEC78154.1| hypothetical protein OsI_17716 [Oryza sativa Indi...    98   6e-19
ref|XP_002268816.1| PREDICTED: auxin-responsive protein IAA33 [V...    91   8e-17

>ref|XP_002447239.1| hypothetical protein SORBIDRAFT_06g031100 [Sorghum bicolor]
           gi|241938422|gb|EES11567.1| hypothetical protein
           SORBIDRAFT_06g031100 [Sorghum bicolor]
          Length = 167

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
 Frame = +3

Query: 90  RKLLKLSGQDDD-LSASVVPPVTVVLEGRSICHRIHLHKHAGYESLAAALRRMFVDTETE 266
           RKLL LS QD+D ++A VVPPVTVVL+GR ICHR+HLH+H GY SLA  LRRMFVD +  
Sbjct: 38  RKLLTLSVQDNDGVAAGVVPPVTVVLDGRCICHRVHLHRHTGYRSLAGTLRRMFVDADDG 97

Query: 267 ERLVDG---LNLSNAVPGYIV 320
           ++  DG   L+L+NAVPG++V
Sbjct: 98  QQRRDGDDDLDLANAVPGHVV 118


>ref|NP_001054106.2| Os04g0653300 [Oryza sativa Japonica Group]
           gi|255675841|dbj|BAF16020.2| Os04g0653300 [Oryza sativa
           Japonica Group]
          Length = 169

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 15/91 (16%)
 Frame = +3

Query: 93  KLLKLSGQD-DDLSASVVPPVTVVLEGRSICHRIHLHKHAGYESLAAALRRMFVDTETEE 269
           K+L+LS Q  DD++A VVPPVTVVL+GRSICHR+HL KH GY SLAAALRRMFVD + + 
Sbjct: 37  KMLRLSVQQGDDVTAGVVPPVTVVLDGRSICHRVHLSKHTGYRSLAAALRRMFVDADDDV 96

Query: 270 RLVD--------------GLNLSNAVPGYIV 320
              D              GL+LSNAVPG++V
Sbjct: 97  GAADEAAGRSSCSDADRGGLDLSNAVPGHVV 127


>emb|CAE01546.1| OSJNBb0022F16.1 [Oryza sativa Japonica Group]
           gi|32488881|emb|CAE03553.1| OSJNBa0060D06.19 [Oryza
           sativa Japonica Group] gi|125591889|gb|EAZ32239.1|
           hypothetical protein OsJ_16443 [Oryza sativa Japonica
           Group]
          Length = 145

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 15/91 (16%)
 Frame = +3

Query: 93  KLLKLSGQD-DDLSASVVPPVTVVLEGRSICHRIHLHKHAGYESLAAALRRMFVDTETEE 269
           K+L+LS Q  DD++A VVPPVTVVL+GRSICHR+HL KH GY SLAAALRRMFVD + + 
Sbjct: 37  KMLRLSVQQGDDVTAGVVPPVTVVLDGRSICHRVHLSKHTGYRSLAAALRRMFVDADDDV 96

Query: 270 RLVD--------------GLNLSNAVPGYIV 320
              D              GL+LSNAVPG++V
Sbjct: 97  GAADEAAGRSSCSDADRGGLDLSNAVPGHVV 127


>gb|EEC78154.1| hypothetical protein OsI_17716 [Oryza sativa Indica Group]
          Length = 169

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 15/91 (16%)
 Frame = +3

Query: 93  KLLKLSGQD-DDLSASVVPPVTVVLEGRSICHRIHLHKHAGYESLAAALRRMFVDTETEE 269
           K+L+LS Q  DD++A VVPPVTVVL+GRSICHR+HL KH GY SLAAALRRMFVD + + 
Sbjct: 37  KMLRLSVQQGDDVTAGVVPPVTVVLDGRSICHRVHLSKHTGYRSLAAALRRMFVDADDDV 96

Query: 270 RLVD--------------GLNLSNAVPGYIV 320
              D              GL+LSNAVPG+++
Sbjct: 97  GAADEAAGRSSCSDADRGGLDLSNAVPGHVI 127


>ref|XP_002268816.1| PREDICTED: auxin-responsive protein IAA33 [Vitis vinifera]
           gi|297735399|emb|CBI17839.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 4/72 (5%)
 Frame = +3

Query: 117 DDDLSASVVPPVTVVLEGRSICHRIHLHKHAGYESLAAALRRMFVDTETEERLVDG---- 284
           DDDL A+VVPPVTVVLEGRSICHRI LH HA Y+SLA ALR+MFVD  + +    G    
Sbjct: 54  DDDLVAAVVPPVTVVLEGRSICHRISLHSHASYQSLARALRQMFVDGSSADVGAAGGDHE 113

Query: 285 LNLSNAVPGYIV 320
           L+LSNAVPG+++
Sbjct: 114 LDLSNAVPGHLI 125


Top