BLASTX nr result

ID: Dioscorea21_contig00024538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024538
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACR35386.1| unknown [Zea mays] gi|413950415|gb|AFW83064.1| hy...    91   7e-17
ref|NP_001132899.1| RNA-binding protein [Zea mays] gi|194695702|...    91   7e-17
gb|ACG34317.1| RNA-binding protein [Zea mays]                          90   2e-16
ref|NP_001043416.2| Os01g0583200 [Oryza sativa Japonica Group] g...    88   8e-16
gb|EEC70964.1| hypothetical protein OsI_02580 [Oryza sativa Indi...    88   8e-16

>gb|ACR35386.1| unknown [Zea mays] gi|413950415|gb|AFW83064.1| hypothetical protein
           ZEAMMB73_571261 [Zea mays]
          Length = 122

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/74 (58%), Positives = 57/74 (77%)
 Frame = -3

Query: 245 KIKWKKLVKSTLKTNPDRAMKIKKLQKLVIKELQDSGVTRDKAQLREMLMNKIKSSSQFV 66
           KIKWKK++  TLK N D  MK+KKLQKLV KELQ+ GV++DK +LR  LM+KI SSS+F 
Sbjct: 47  KIKWKKIITKTLKANADGVMKLKKLQKLVSKELQECGVSKDKEELRATLMDKIASSSRFY 106

Query: 65  IDDKRIQLVERTEQ 24
           +D K ++LV + E+
Sbjct: 107 VDGKNVRLVAKNEE 120


>ref|NP_001132899.1| RNA-binding protein [Zea mays] gi|194695702|gb|ACF81935.1| unknown
           [Zea mays] gi|413950419|gb|AFW83068.1| RNA-binding
           protein [Zea mays]
          Length = 298

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/74 (58%), Positives = 57/74 (77%)
 Frame = -3

Query: 245 KIKWKKLVKSTLKTNPDRAMKIKKLQKLVIKELQDSGVTRDKAQLREMLMNKIKSSSQFV 66
           KIKWKK++  TLK N D  MK+KKLQKLV KELQ+ GV++DK +LR  LM+KI SSS+F 
Sbjct: 223 KIKWKKIITKTLKANADGVMKLKKLQKLVSKELQECGVSKDKEELRATLMDKIASSSRFY 282

Query: 65  IDDKRIQLVERTEQ 24
           +D K ++LV + E+
Sbjct: 283 VDGKNVRLVAKNEE 296


>gb|ACG34317.1| RNA-binding protein [Zea mays]
          Length = 323

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/74 (56%), Positives = 57/74 (77%)
 Frame = -3

Query: 245 KIKWKKLVKSTLKTNPDRAMKIKKLQKLVIKELQDSGVTRDKAQLREMLMNKIKSSSQFV 66
           KIKWKK++  TLK N D  MK+KKLQK+V KELQ+ GV++DK +LR  LM+KI SSS+F 
Sbjct: 223 KIKWKKIITKTLKANADGVMKLKKLQKIVSKELQECGVSKDKEELRATLMDKIASSSRFS 282

Query: 65  IDDKRIQLVERTEQ 24
           +D K ++LV + E+
Sbjct: 283 VDGKNVRLVAKNEE 296


>ref|NP_001043416.2| Os01g0583200 [Oryza sativa Japonica Group]
           gi|53793441|dbj|BAD53164.1| RNA-binding protein-like
           [Oryza sativa Japonica Group]
           gi|125570953|gb|EAZ12468.1| hypothetical protein
           OsJ_02364 [Oryza sativa Japonica Group]
           gi|215737134|dbj|BAG96063.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255673398|dbj|BAF05330.2| Os01g0583200 [Oryza sativa
           Japonica Group]
          Length = 304

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/71 (57%), Positives = 55/71 (77%)
 Frame = -3

Query: 245 KIKWKKLVKSTLKTNPDRAMKIKKLQKLVIKELQDSGVTRDKAQLREMLMNKIKSSSQFV 66
           KIKWKK++   L+TNPD  +K+KKLQKLV KEL + G+T DK Q+  +LM+KI SSS+F 
Sbjct: 233 KIKWKKIITKVLQTNPDGVLKLKKLQKLVTKELLECGLTEDKEQMHAILMDKISSSSRFS 292

Query: 65  IDDKRIQLVER 33
           +D KRI+LV +
Sbjct: 293 VDGKRIRLVAK 303


>gb|EEC70964.1| hypothetical protein OsI_02580 [Oryza sativa Indica Group]
          Length = 304

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/71 (57%), Positives = 55/71 (77%)
 Frame = -3

Query: 245 KIKWKKLVKSTLKTNPDRAMKIKKLQKLVIKELQDSGVTRDKAQLREMLMNKIKSSSQFV 66
           KIKWKK++   L+TNPD  +K+KKLQKLV KEL + G+T DK Q+  +LM+KI SSS+F 
Sbjct: 233 KIKWKKIITKVLQTNPDGVLKLKKLQKLVTKELLECGLTEDKEQMHAILMDKISSSSRFS 292

Query: 65  IDDKRIQLVER 33
           +D KRI+LV +
Sbjct: 293 VDGKRIRLVAK 303


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