BLASTX nr result

ID: Dioscorea21_contig00024518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024518
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003576752.1| PREDICTED: transcription factor PCF2-like [B...   219   6e-55
ref|NP_001062409.1| Os08g0544800 [Oryza sativa Japonica Group] g...   218   2e-54
dbj|BAA23143.1| PCF2 [Oryza sativa Japonica Group]                    218   2e-54
gb|AEC05332.1| candidate developmental transcription factor TCP4...   195   2e-47
tpg|DAA48356.1| TPA: hypothetical protein ZEAMMB73_169846 [Zea m...   193   6e-47

>ref|XP_003576752.1| PREDICTED: transcription factor PCF2-like [Brachypodium distachyon]
          Length = 367

 Score =  219 bits (559), Expect = 6e-55
 Identities = 139/263 (52%), Positives = 163/263 (61%), Gaps = 15/263 (5%)
 Frame = +2

Query: 74  IVPKPEPTEMVAGLPVLRRPAGARTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 253
           +VPKPEP E   G+ ++R+P   R +DRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS
Sbjct: 50  MVPKPEPVEFFGGMAMVRKPP-PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 108

Query: 254 DGETIRWLLQHAEPAIIAATGTGTVPAIATTVGGTLQIPTQSQTAPVXXXXXXXXXXXXX 433
           DGETIRWLLQ +EPAI+AATGTGTVPAIATTV G L+IPTQS ++               
Sbjct: 109 DGETIRWLLQQSEPAIVAATGTGTVPAIATTVDGVLRIPTQSSSSSA---DPAVVDGAGE 165

Query: 434 XXXXXXXXXLQPTRAA-----GSSAATGYYQSVPVHDPML-----GGAGAVSISTGLAPI 583
                    LQPTRAA      + AA   Y SV V DP+L     GG  A+S+++GLAP+
Sbjct: 166 ESSAKRRRKLQPTRAAPGVTLPTVAAPSAYYSV-VADPLLQGPAGGGGAAISVASGLAPM 224

Query: 584 -GAAQGLVPMW--XXXXXXXXXXXXRVIP-PTAVWMVP-PSATTIAGPSGQQAQIWAFPS 748
            G  QGLVP++               +IP  TAVWMVP P A   A    Q  Q WAF S
Sbjct: 225 SGHHQGLVPVFAVPSSGSPAAAVGGHMIPQATAVWMVPQPVAGGGAAVGNQPTQFWAFQS 284

Query: 749 TTQIINLAPARPAAAVFPGLNIA 817
             Q+INLA A+ A      LN+A
Sbjct: 285 APQLINLAGAQGAVFPAAALNVA 307


>ref|NP_001062409.1| Os08g0544800 [Oryza sativa Japonica Group]
           gi|75135013|sp|Q6ZBH6.1|PCF2_ORYSJ RecName:
           Full=Transcription factor PCF2
           gi|187470917|sp|A2YXQ1.1|PCF2_ORYSI RecName:
           Full=Transcription factor PCF2
           gi|42408554|dbj|BAD09732.1| putative transcription
           factor PCF3 [Oryza sativa Japonica Group]
           gi|113624378|dbj|BAF24323.1| Os08g0544800 [Oryza sativa
           Japonica Group] gi|125562414|gb|EAZ07862.1| hypothetical
           protein OsI_30124 [Oryza sativa Indica Group]
           gi|125604212|gb|EAZ43537.1| hypothetical protein
           OsJ_28158 [Oryza sativa Japonica Group]
           gi|215765787|dbj|BAG87484.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767506|dbj|BAG99734.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 373

 Score =  218 bits (555), Expect = 2e-54
 Identities = 137/254 (53%), Positives = 161/254 (63%), Gaps = 13/254 (5%)
 Frame = +2

Query: 74  IVPKPEPTEMVAGLPVLRRPAGARTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 253
           +VPKPEP E   G+ ++R+P   R +DRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS
Sbjct: 52  LVPKPEPVEFFGGMAMVRKPP-PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 110

Query: 254 DGETIRWLLQHAEPAIIAATGTGTVPAIATTVGGTLQIPTQSQTAPVXXXXXXXXXXXXX 433
           DGETIRWLLQ +EPAIIAATGTGTVPAIATTV G L+IPTQS ++               
Sbjct: 111 DGETIRWLLQQSEPAIIAATGTGTVPAIATTVDGVLRIPTQSSSS---SGPASSAVVDGE 167

Query: 434 XXXXXXXXXLQPTRA-AGSS----AATGYYQSVPVHDPMLGGAG--AVSISTGLAPI--- 583
                    LQPTRA AG+S    AA   Y  V + DP+L G+G  A+S+ +GLAPI   
Sbjct: 168 ESSAKRRRKLQPTRAVAGASPLATAAPAAYYPV-IADPLLQGSGGAAISVPSGLAPITAT 226

Query: 584 GAAQGLVPMW--XXXXXXXXXXXXRVIP-PTAVWMVPPSATTIAGPSGQQAQIWAFPSTT 754
           GA QGLVP++              R+IP  TAVWMVP  A   AG   Q  Q WA  S  
Sbjct: 227 GAPQGLVPVFAVPATGSPAVAGGNRMIPQATAVWMVPQPAGA-AGAGNQPTQFWAIQSAP 285

Query: 755 QIINLAPARPAAAV 796
           Q++N A A+   A+
Sbjct: 286 QLVNFAGAQFPTAI 299


>dbj|BAA23143.1| PCF2 [Oryza sativa Japonica Group]
          Length = 373

 Score =  218 bits (554), Expect = 2e-54
 Identities = 137/254 (53%), Positives = 161/254 (63%), Gaps = 13/254 (5%)
 Frame = +2

Query: 74  IVPKPEPTEMVAGLPVLRRPAGARTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 253
           +VPKPEP E   G+ ++R+P   R +DRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS
Sbjct: 52  LVPKPEPVEFFGGMAMVRKPP-PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 110

Query: 254 DGETIRWLLQHAEPAIIAATGTGTVPAIATTVGGTLQIPTQSQTAPVXXXXXXXXXXXXX 433
           DGETIRWLLQ +EPAIIAATGTGTVPAIATTV G L+IPTQS ++               
Sbjct: 111 DGETIRWLLQQSEPAIIAATGTGTVPAIATTVDGVLRIPTQSSSS---SGPASSAVVDGE 167

Query: 434 XXXXXXXXXLQPTRA-AGSS----AATGYYQSVPVHDPMLGGAG--AVSISTGLAPI--- 583
                    LQPTRA AG+S    AA   Y  V + DP+L G+G  A+S+ +GLAPI   
Sbjct: 168 ESSAKRRRKLQPTRAVAGASPLATAAPAAYYPV-IADPLLQGSGGAAISVPSGLAPITAT 226

Query: 584 GAAQGLVPMW--XXXXXXXXXXXXRVIP-PTAVWMVPPSATTIAGPSGQQAQIWAFPSTT 754
           GA QGLVP++              R+IP  TAVWMVP  A   AG   Q  Q WA  S  
Sbjct: 227 GAPQGLVPVFAVPATGSPAVAGGNRMIPQATAVWMVPRPAGA-AGAGNQPTQFWAIQSAP 285

Query: 755 QIINLAPARPAAAV 796
           Q++N A A+   A+
Sbjct: 286 QLVNFAGAQFPTAI 299


>gb|AEC05332.1| candidate developmental transcription factor TCP4 [Phalaenopsis
           hybrid cultivar]
          Length = 236

 Score =  195 bits (495), Expect = 2e-47
 Identities = 126/250 (50%), Positives = 140/250 (56%), Gaps = 4/250 (1%)
 Frame = +2

Query: 149 KDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQHAEPAIIAATGTGTV 328
           KDRH+KVEGRGRRIR+PA CAARIFQLTRELGHKSDG+TIRWLLQHAEPAIIAATGTGTV
Sbjct: 1   KDRHSKVEGRGRRIRIPATCAARIFQLTRELGHKSDGDTIRWLLQHAEPAIIAATGTGTV 60

Query: 329 PAIATTVGGTLQIPTQ-SQTAPVXXXXXXXXXXXXXXXXXXXXXXLQPTRAAGSSAATGY 505
           PAIAT V GTL+IPTQ S  AP                       LQPTRA       GY
Sbjct: 61  PAIATNVNGTLKIPTQASNPAP---------SVSSAADVTKRRRKLQPTRAVAGGGVIGY 111

Query: 506 YQSVPVHDPMLGGAGAVSISTGLAPIGAAQGLVPMWXXXXXXXXXXXXRVIPPTAVWMVP 685
           +Q     D +L   GA+SIS GLAP+ AA  +VPMW              I P AVWM P
Sbjct: 112 FQGA---DLLLPSGGAISISAGLAPV-AASRVVPMW------TTVSGAAAISPAAVWMFP 161

Query: 686 PSATTIAGPSGQQAQIWAFP--STTQIINLAPARPA-AAVFPGLNIAAGAVEHQVTTPSE 856
            SA T       Q  I  FP   +   +N A ARP  AA    ++ A G  E +      
Sbjct: 162 SSAAT-----SSQGHILTFPIGLSAAGVNFAAARPVLAAASAAISEAVGGKEERELMKES 216

Query: 857 GKAELQLMHR 886
             AE    HR
Sbjct: 217 VDAEELEEHR 226


>tpg|DAA48356.1| TPA: hypothetical protein ZEAMMB73_169846 [Zea mays]
          Length = 323

 Score =  193 bits (490), Expect = 6e-47
 Identities = 127/254 (50%), Positives = 146/254 (57%), Gaps = 6/254 (2%)
 Frame = +2

Query: 74  IVPKPEPTEMVAGLPVLRRPAGARTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 253
           +VPKPEP E   G+ V+R     R +DRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS
Sbjct: 40  MVPKPEPVEFFGGMAVVRSKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKS 99

Query: 254 DGETIRWLLQHAEPAIIAATGTGTVPAIATTVGGTLQIPTQSQTAPVXXXXXXXXXXXXX 433
           DGETIRWLLQ +EPAIIAATGTGTVPAIATTV G L+IPTQS ++               
Sbjct: 100 DGETIRWLLQQSEPAIIAATGTGTVPAIATTVDGVLRIPTQSSSS--SSPSSLTTVVDGD 157

Query: 434 XXXXXXXXXLQPTRAAG-----SSAATGYYQSVPVHDPMLGGAGAVSISTGLAPIGAAQG 598
                    LQPTRAA      ++AA   Y  V + DP+L G      S  LAP G    
Sbjct: 158 EASAKRRRKLQPTRAAAGASPLATAAPAAYYPV-LADPLLQGH---RWSGHLAP-GGGNR 212

Query: 599 LVPMWXXXXXXXXXXXXRVIPPTAVWMVPPSATTIAGPSGQQAQIWAFPSTTQIINLAPA 778
           ++P                   TAVWMVP      A P+    Q WA     Q+INL  A
Sbjct: 213 MIPQ-----------------ATAVWMVPQPGAAAAQPT----QFWAIQPAPQLINLGGA 251

Query: 779 RPAAAVFP-GLNIA 817
           +  AAVFP  +N+A
Sbjct: 252 Q--AAVFPAAVNVA 263


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