BLASTX nr result

ID: Dioscorea21_contig00024512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024512
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273344.2| PREDICTED: uncharacterized protein LOC100251...   345   1e-92
gb|AGC39090.1| remorin-4 protein [Dimocarpus longan]                  338   2e-90
ref|XP_003631344.1| PREDICTED: uncharacterized protein LOC100251...   338   2e-90
ref|XP_002314738.1| predicted protein [Populus trichocarpa] gi|2...   335   2e-89
ref|XP_002518807.1| DNA binding protein, putative [Ricinus commu...   333   4e-89

>ref|XP_002273344.2| PREDICTED: uncharacterized protein LOC100251322 isoform 1 [Vitis
            vinifera] gi|297738283|emb|CBI27484.3| unnamed protein
            product [Vitis vinifera]
          Length = 510

 Score =  345 bits (885), Expect = 1e-92
 Identities = 189/334 (56%), Positives = 228/334 (68%), Gaps = 7/334 (2%)
 Frame = -1

Query: 1154 GGGARSSAAKVVVECNDG-------VDTKGVDLSIGRKEGDLQKAVSWVPELYSVAETPA 996
            G G R  + KVVVE  D         DTK +D S  +KE   QK V+W  + Y  A+  A
Sbjct: 177  GYGNRQPSTKVVVEVPDQRLVPFEEPDTKRIDPSHSKKESAGQKFVTWEVDSYPTADPYA 236

Query: 995  KPPLIAGNSISDSAINLSRHDSSASVQSAXXXXXXXXXXXXXSMRDVGTEMTPIASQEPS 816
            KP L+  N++ +SAI+LSRHD S S+ SA             SMRD+GTEMTPIASQEPS
Sbjct: 237  KPVLMIENTVEESAISLSRHDPSMSIHSATTFIPPPSTARSVSMRDMGTEMTPIASQEPS 296

Query: 815  RTATPVRATTPMRSPNSSQPSTPRRAAQNSDPIESVDCHGGSSNTELSEKDLQMRTRKEI 636
            RT TPVRATTP RSP SS+PSTP R A  S P+  ++    S+  ELSEK++QM+TR+EI
Sbjct: 297  RTGTPVRATTPTRSPTSSRPSTPGRGAPASSPVGPLNDCLDSNKNELSEKEIQMKTRREI 356

Query: 635  MILGTKLGKTNIAAWAXXXXXXXXXXXSLKIAPVSQTSKSVIEARASAWEEAEKAKYLAR 456
            M+LGT+LGK NIAAWA           SLK   V Q +KSVIE RA+AWEEAEKAKY+AR
Sbjct: 357  MVLGTQLGKMNIAAWASKEEEDKDASTSLKTVAVEQPTKSVIETRAAAWEEAEKAKYMAR 416

Query: 455  FKREEIKIQAWENHQKAKTEAEMRKIEVDVEKMRAQAHDKLMNKLAATXXXXXXXXXXXX 276
            F+REE+KIQ WENHQKAKTEAEMRKIEV+VE++R +AHD+LMNKLAA             
Sbjct: 417  FEREELKIQVWENHQKAKTEAEMRKIEVEVERIRGRAHDRLMNKLAAARHRAEEKRAAAE 476

Query: 275  XXRNQQSAKTAQEVEYIRRTGRIPSSFSCWGLCS 174
              R++Q+AKT Q+ EYIR+TGRIPSSFSCW  CS
Sbjct: 477  AKRSRQAAKTEQQAEYIRKTGRIPSSFSCWNWCS 510


>gb|AGC39090.1| remorin-4 protein [Dimocarpus longan]
          Length = 466

 Score =  338 bits (867), Expect = 2e-90
 Identities = 186/327 (56%), Positives = 229/327 (70%), Gaps = 3/327 (0%)
 Frame = -1

Query: 1145 ARSSAAKVVVECND--GVDTKGVDLSIGRKEGDLQKAVSWVPELYSVAETPAKPPLIAGN 972
            +R S+ K+++E  D    DTK +D +  +K+  + K VSW  +   +A++ +KP L+  N
Sbjct: 141  SRQSSTKLLLEVPDYEEPDTKRIDTTQAKKDPGIPKFVSWEADSDPIADSYSKPVLMIEN 200

Query: 971  SISDSAINLSRHDSSASVQSAXXXXXXXXXXXXXSMRDVGTEMTPIASQEPSRTATPVRA 792
            S+++SAI+LSRHDSS ++QSA             SMRD+GTEMTPIASQEPSRT TPVRA
Sbjct: 201  SVAESAISLSRHDSSIAMQSATTIIPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRA 260

Query: 791  TTPMRSPNSSQPSTPRRAAQNSDPIESVDCHGGSSNTELSEKDLQMRTRKEIMILGTKLG 612
            +TP+RSPNSS+PSTP R A    P    +      N ELSEKDLQM+TR+EIM LGT+LG
Sbjct: 261  STPIRSPNSSRPSTPGRTAPAPSPTNPPN-DNLDHNKELSEKDLQMKTRREIMALGTQLG 319

Query: 611  KTNIAAWAXXXXXXXXXXXS-LKIAPVSQTSKSVIEARASAWEEAEKAKYLARFKREEIK 435
            K NIAAWA           + LK  P  Q  KSVIE RA+AWEEAEKAKY+ARFKREE+K
Sbjct: 320  KMNIAAWASKEEEEDKDASASLKTTPSGQPIKSVIETRAAAWEEAEKAKYIARFKREEMK 379

Query: 434  IQAWENHQKAKTEAEMRKIEVDVEKMRAQAHDKLMNKLAATXXXXXXXXXXXXXXRNQQS 255
            IQAWENHQKAKTEA+MRKIEV+VE++R +AHDKLMNKLAA               RN+Q+
Sbjct: 380  IQAWENHQKAKTEADMRKIEVEVERIRGRAHDKLMNKLAAARHKAEEKRAEAEAKRNRQA 439

Query: 254  AKTAQEVEYIRRTGRIPSSFSCWGLCS 174
            AKT Q+ E+IRRTGRIPSSFSCW  CS
Sbjct: 440  AKTEQQAEFIRRTGRIPSSFSCWSWCS 466


>ref|XP_003631344.1| PREDICTED: uncharacterized protein LOC100251322 isoform 2 [Vitis
            vinifera]
          Length = 517

 Score =  338 bits (867), Expect = 2e-90
 Identities = 189/341 (55%), Positives = 228/341 (66%), Gaps = 14/341 (4%)
 Frame = -1

Query: 1154 GGGARSSAAKVVVECNDG-------VDTKGVDLSIGRKEGDLQKAVSWVPELYSVAETPA 996
            G G R  + KVVVE  D         DTK +D S  +KE   QK V+W  + Y  A+  A
Sbjct: 177  GYGNRQPSTKVVVEVPDQRLVPFEEPDTKRIDPSHSKKESAGQKFVTWEVDSYPTADPYA 236

Query: 995  KPPLIAGNSISDSAINLSRHDSSASVQSAXXXXXXXXXXXXXSMRDVGTEMTPIASQEPS 816
            KP L+  N++ +SAI+LSRHD S S+ SA             SMRD+GTEMTPIASQEPS
Sbjct: 237  KPVLMIENTVEESAISLSRHDPSMSIHSATTFIPPPSTARSVSMRDMGTEMTPIASQEPS 296

Query: 815  RTATPVRATTPMRSPNSSQPSTPRRAAQNSDPIESVDCHGGSSNTELSEKDLQMRTRKEI 636
            RT TPVRATTP RSP SS+PSTP R A  S P+  ++    S+  ELSEK++QM+TR+EI
Sbjct: 297  RTGTPVRATTPTRSPTSSRPSTPGRGAPASSPVGPLNDCLDSNKNELSEKEIQMKTRREI 356

Query: 635  MILGTKLGKTNIAAWAXXXXXXXXXXXSLKIAPVSQTSKSVIEARASAWEEAEKAKYLAR 456
            M+LGT+LGK NIAAWA           SLK   V Q +KSVIE RA+AWEEAEKAKY+AR
Sbjct: 357  MVLGTQLGKMNIAAWASKEEEDKDASTSLKTVAVEQPTKSVIETRAAAWEEAEKAKYMAR 416

Query: 455  FKREEIKIQAWENHQKAKTEAEMRKIE-------VDVEKMRAQAHDKLMNKLAATXXXXX 297
            F+REE+KIQ WENHQKAKTEAEMRKIE       V+VE++R +AHD+LMNKLAA      
Sbjct: 417  FEREELKIQVWENHQKAKTEAEMRKIETNTCTFQVEVERIRGRAHDRLMNKLAAARHRAE 476

Query: 296  XXXXXXXXXRNQQSAKTAQEVEYIRRTGRIPSSFSCWGLCS 174
                     R++Q+AKT Q+ EYIR+TGRIPSSFSCW  CS
Sbjct: 477  EKRAAAEAKRSRQAAKTEQQAEYIRKTGRIPSSFSCWNWCS 517


>ref|XP_002314738.1| predicted protein [Populus trichocarpa] gi|222863778|gb|EEF00909.1|
            predicted protein [Populus trichocarpa]
          Length = 524

 Score =  335 bits (858), Expect = 2e-89
 Identities = 187/330 (56%), Positives = 224/330 (67%), Gaps = 7/330 (2%)
 Frame = -1

Query: 1145 ARSSAAKVVVECNDGV-------DTKGVDLSIGRKEGDLQKAVSWVPELYSVAETPAKPP 987
            +R  + KVVVE  +         DTK VD S  +KE  +QK  SW  + Y +A++  KP 
Sbjct: 195  SRQPSTKVVVEVPEQKVVTFEEPDTKRVDTSQAKKETGVQKLKSWEADSYPIADSYGKPV 254

Query: 986  LIAGNSISDSAINLSRHDSSASVQSAXXXXXXXXXXXXXSMRDVGTEMTPIASQEPSRTA 807
            L+  NS+  SAI+LSRHDSS ++ SA             SMRD+GTEMTPIASQEPSRT 
Sbjct: 255  LMIENSVGQSAISLSRHDSSLTIHSATTFIPPPSTARSVSMRDMGTEMTPIASQEPSRTG 314

Query: 806  TPVRATTPMRSPNSSQPSTPRRAAQNSDPIESVDCHGGSSNTELSEKDLQMRTRKEIMIL 627
            TPVRATTP+ SP SS+PSTP RAA  S P    + H  + N ELSEK+LQM+TR+EIM+L
Sbjct: 315  TPVRATTPILSPTSSRPSTPGRAAPTSSPSNPFNDHQ-NPNKELSEKELQMKTRREIMVL 373

Query: 626  GTKLGKTNIAAWAXXXXXXXXXXXSLKIAPVSQTSKSVIEARASAWEEAEKAKYLARFKR 447
            GT+LGK NIAAWA           SLK     Q SK+VIE RA+AWEEAEKAKY ARFKR
Sbjct: 374  GTQLGKKNIAAWASKEEEDKDASTSLKTIGADQQSKNVIETRAAAWEEAEKAKYTARFKR 433

Query: 446  EEIKIQAWENHQKAKTEAEMRKIEVDVEKMRAQAHDKLMNKLAATXXXXXXXXXXXXXXR 267
            EE+KIQAWENHQKAKTEAEMRKIEV+VE++R QA D+LMNKLAA               R
Sbjct: 434  EEMKIQAWENHQKAKTEAEMRKIEVEVERIRGQAQDRLMNKLAAARHKAEEKRAAAEAKR 493

Query: 266  NQQSAKTAQEVEYIRRTGRIPSSFSCWGLC 177
            N+++AKT Q+ EYIRRTGR+PSSF+  G C
Sbjct: 494  NRRAAKTEQQAEYIRRTGRVPSSFTFCGCC 523


>ref|XP_002518807.1| DNA binding protein, putative [Ricinus communis]
            gi|223542188|gb|EEF43732.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 528

 Score =  333 bits (855), Expect = 4e-89
 Identities = 190/351 (54%), Positives = 234/351 (66%), Gaps = 14/351 (3%)
 Frame = -1

Query: 1184 GVQHKRLGVLGGGARSSAAKVVVECNDGV-------DTKGVDLSIGRKEGDLQKAVSWVP 1026
            G+  +++G     +R S+ KVVVE  +         DTK VD +  +KE  +QK VSW  
Sbjct: 179  GIASRKMGNAAYMSRQSSTKVVVEVPEQKMVAFEEPDTKCVDSNQSKKESGVQKFVSWEA 238

Query: 1025 ELYSVAETPAKPPLIAGNSISDSAINLSRHDSSASVQSAXXXXXXXXXXXXXSMRDVGTE 846
            E + + ++ AKP L+  NS+ +SAI+LSRHDSS ++ SA             SMRD+GTE
Sbjct: 239  ESHPIPDSYAKPVLMIENSVGESAISLSRHDSSLAIHSATAFIPAPSTARSVSMRDMGTE 298

Query: 845  MTPIASQEPSRTATPVRATTPMRSPNSSQPSTPRRAAQNSDPIESVDCHGGSSNTELSEK 666
            MTPIASQEPSR  TPVRATTP+RSPNSS+PSTP R A  S PI   + H   +  EL+EK
Sbjct: 299  MTPIASQEPSRNGTPVRATTPIRSPNSSRPSTPGRDAPASSPINPSNNHLNQTK-ELTEK 357

Query: 665  DLQMRTRKEIMILGTKLGKTNIAAWAXXXXXXXXXXXSLKIAPVSQTSKSVIEARASAWE 486
            +LQM+TRKEI+ LGT+LGK NIAAWA           SLK  P  Q +KSVI+ RA+AWE
Sbjct: 358  ELQMKTRKEIIALGTQLGKMNIAAWASKEEEDKDASTSLKTLPAEQPTKSVIDTRAAAWE 417

Query: 485  EAEKAKYLARFKREEIKIQAWENHQKAKTEAEMRKIE-------VDVEKMRAQAHDKLMN 327
            +AEKAKY+ARFKREE+KIQAWENHQKAKTEAEMRKIE       V+VE+MR +A DKLMN
Sbjct: 418  DAEKAKYMARFKREEMKIQAWENHQKAKTEAEMRKIETNRRAFQVEVERMRGRAQDKLMN 477

Query: 326  KLAATXXXXXXXXXXXXXXRNQQSAKTAQEVEYIRRTGRIPSSFSCWGLCS 174
            KLAA               R++Q+AKT Q+ EYIRRTGR+PSSFS    CS
Sbjct: 478  KLAAARHKAEEKRSAAEVKRSRQAAKTEQQAEYIRRTGRVPSSFSLCSWCS 528


Top