BLASTX nr result

ID: Dioscorea21_contig00024506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024506
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264338.2| PREDICTED: uncharacterized protein LOC100265...    70   1e-10
emb|CAN74385.1| hypothetical protein VITISV_023803 [Vitis vinifera]    70   1e-10
ref|XP_002308808.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CBI39709.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002300373.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002264338.2| PREDICTED: uncharacterized protein LOC100265203 [Vitis vinifera]
          Length = 688

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/101 (35%), Positives = 59/101 (58%)
 Frame = +2

Query: 11  EDEDEIGHRISAKNCKPRKIRIVKGNKQFLTDPLGVRVSSRASHIASCKPPYQNMKFGLH 190
           E+++E+    + K    ++ R  +G ++F+ D    R+  R S +   + P+ N+K+ L 
Sbjct: 314 EEDEELSPGDNVKQ-GAKRTRSCRGRQRFVNDRSCARIPRRGSQMMMYESPHMNLKYDLL 372

Query: 191 AIGSLSTRFRNPLHCLNLPYKVDQKVEMLCQDSGIRGCWFR 313
           +   LS +   P    N  +KVD+K+E+LCQDSGIRGCWFR
Sbjct: 373 SRRLLSQKHVEPHPWPNPLFKVDEKIELLCQDSGIRGCWFR 413


>emb|CAN74385.1| hypothetical protein VITISV_023803 [Vitis vinifera]
          Length = 821

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/101 (35%), Positives = 59/101 (58%)
 Frame = +2

Query: 11  EDEDEIGHRISAKNCKPRKIRIVKGNKQFLTDPLGVRVSSRASHIASCKPPYQNMKFGLH 190
           E+++E+    + K    ++ R  +G ++F+ D    R+  R S +   + P+ N+K+ L 
Sbjct: 334 EEDEELSPGDNVKQ-GAKRTRSCRGRQRFVNDRSCARIPRRGSQMMMYESPHMNLKYDLL 392

Query: 191 AIGSLSTRFRNPLHCLNLPYKVDQKVEMLCQDSGIRGCWFR 313
           +   LS +   P    N  +KVD+K+E+LCQDSGIRGCWFR
Sbjct: 393 SRRLLSQKHVEPHPWPNPLFKVDEKIELLCQDSGIRGCWFR 433


>ref|XP_002308808.1| predicted protein [Populus trichocarpa] gi|222854784|gb|EEE92331.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
 Frame = +2

Query: 11  EDEDEIGH----RISAKNCKPRKIRIVKGNKQFLTDPLGVRVSSRASHIASCKPPYQNMK 178
           EDE+E+ H     + +K  +  K       +  L    G+R  +  + IA CK  Y  +K
Sbjct: 317 EDEEELTHDYPTSVGSKRSRTSK------EQDRLESGSGLRNWACGNQIAKCKSGYPKLK 370

Query: 179 FGLHAIGSLSTRFRNPLHCLNLPYKVDQKVEMLCQDSGIRGCWFR 313
             L  + S+   F  P    + P+KV++K+EMLCQDSGIRGCWFR
Sbjct: 371 LRLSKV-SMGIEFVIPQSKCSAPFKVNEKIEMLCQDSGIRGCWFR 414


>emb|CBI39709.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/80 (40%), Positives = 48/80 (60%)
 Frame = +2

Query: 74  IVKGNKQFLTDPLGVRVSSRASHIASCKPPYQNMKFGLHAIGSLSTRFRNPLHCLNLPYK 253
           I+   ++F+ D    R+  R S +   + P+ N+K+ L +   LS +   P    N  +K
Sbjct: 297 ILSWRQRFVNDRSCARIPRRGSQMMMYESPHMNLKYDLLSRRLLSQKHVEPHPWPNPLFK 356

Query: 254 VDQKVEMLCQDSGIRGCWFR 313
           VD+K+E+LCQDSGIRGCWFR
Sbjct: 357 VDEKIELLCQDSGIRGCWFR 376


>ref|XP_002300373.1| predicted protein [Populus trichocarpa] gi|222847631|gb|EEE85178.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/104 (36%), Positives = 55/104 (52%)
 Frame = +2

Query: 2   CEDEDEDEIGHRISAKNCKPRKIRIVKGNKQFLTDPLGVRVSSRASHIASCKPPYQNMKF 181
           C   +EDE+ +         ++ R    ++ F+TD LGV VS   S I +    Y N+++
Sbjct: 292 CGLTEEDEVLNPSENIKLGAKRTRSGSVSEAFVTDHLGVGVSG--SQIMAFDSSYLNLRY 349

Query: 182 GLHAIGSLSTRFRNPLHCLNLPYKVDQKVEMLCQDSGIRGCWFR 313
           G ++            H     +KVDQK+E+LCQDSGIRGCWFR
Sbjct: 350 GWYS------------HL----FKVDQKIELLCQDSGIRGCWFR 377


Top