BLASTX nr result

ID: Dioscorea21_contig00023680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023680
         (1451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281090.1| PREDICTED: proliferating cell nuclear antige...   479   e-133
gb|ADA70357.1| proliferation cell nuclear antigen [Persea americ...   477   e-132
ref|NP_001241553.1| proliferating cell nuclear antigen [Glycine ...   476   e-132
ref|XP_004143139.1| PREDICTED: proliferating cell nuclear antige...   475   e-131
ref|XP_003551328.1| PREDICTED: proliferating cell nuclear antige...   475   e-131

>ref|XP_002281090.1| PREDICTED: proliferating cell nuclear antigen [Vitis vinifera]
            gi|147789518|emb|CAN72062.1| hypothetical protein
            VITISV_031803 [Vitis vinifera]
          Length = 266

 Score =  479 bits (1234), Expect = e-133
 Identities = 241/259 (93%), Positives = 252/259 (97%), Gaps = 1/259 (0%)
 Frame = +1

Query: 529  VQGSLLKKVLEAIKELVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNL 708
            VQGSLLKKVLEAIK+LV DANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRN+
Sbjct: 7    VQGSLLKKVLEAIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNI 66

Query: 709  SMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPNQDKIADFEMKLMDIDSEHL 888
            SMGMNLNN+SKMLKCAGNDDIIT+KADDGSDTVTFMFESP QDKIADFEMKLMDIDSEHL
Sbjct: 67   SMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHL 126

Query: 889  GIPEAEYHAIVKMPSTEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGNANIVCRQNT 1068
            GIPEAEYHAIV+MPS+EF RICKDLSSIGDTVVISVTKEGVKFSTRGDIG ANIVCRQNT
Sbjct: 127  GIPEAEYHAIVRMPSSEFQRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNT 186

Query: 1069 TVDKPEEATIIEMQEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYKVADMGY 1248
            TVDKPEEAT+IEM EPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYK+A+MGY
Sbjct: 187  TVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYKIAEMGY 246

Query: 1249 IRFYLAPKIEDDED-MKPE 1302
            IRFYLAPKIE+DED  KP+
Sbjct: 247  IRFYLAPKIEEDEDETKPQ 265


>gb|ADA70357.1| proliferation cell nuclear antigen [Persea americana]
          Length = 290

 Score =  477 bits (1227), Expect = e-132
 Identities = 237/254 (93%), Positives = 250/254 (98%)
 Frame = +1

Query: 529  VQGSLLKKVLEAIKELVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNL 708
            VQGSLLKKVLE++K+LVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNL
Sbjct: 7    VQGSLLKKVLESVKDLVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNL 66

Query: 709  SMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPNQDKIADFEMKLMDIDSEHL 888
            SMGMNLNN+SKMLKCAGNDDIIT+KADDGSDTVTFMFESP QDKIADFEMKLMDIDSEHL
Sbjct: 67   SMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHL 126

Query: 889  GIPEAEYHAIVKMPSTEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGNANIVCRQNT 1068
            GIPEAEYHAIV+MPS EFARICKDLSSIGDTVVISVTKEGVKFSTRGDIG ANIVCRQNT
Sbjct: 127  GIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNT 186

Query: 1069 TVDKPEEATIIEMQEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYKVADMGY 1248
            +VDKPEE+TIIEM EPVSLTFALRYMNSFTKATPL+N+VTISLSSELPVVVEYK+A+MGY
Sbjct: 187  SVDKPEESTIIEMNEPVSLTFALRYMNSFTKATPLANSVTISLSSELPVVVEYKIAEMGY 246

Query: 1249 IRFYLAPKIEDDED 1290
            IRFYLAPKIEDDE+
Sbjct: 247  IRFYLAPKIEDDEE 260


>ref|NP_001241553.1| proliferating cell nuclear antigen [Glycine max]
            gi|255641634|gb|ACU21089.1| unknown [Glycine max]
          Length = 266

 Score =  476 bits (1225), Expect = e-132
 Identities = 236/260 (90%), Positives = 254/260 (97%), Gaps = 1/260 (0%)
 Frame = +1

Query: 529  VQGSLLKKVLEAIKELVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNL 708
            VQGSLLKKVLE++KELV DANFDCS+TGFSLQAMDSSHVALVALLLRSEGFEHYRCDRN+
Sbjct: 7    VQGSLLKKVLESVKELVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNI 66

Query: 709  SMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPNQDKIADFEMKLMDIDSEHL 888
            SMGMNLNN++KMLKCAGNDDIIT+KADDGSDTVTFMFESP QDKI+DFEMKLMDIDSEHL
Sbjct: 67   SMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHL 126

Query: 889  GIPEAEYHAIVKMPSTEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGNANIVCRQNT 1068
            GIPEAEYHAIVKMPS+EFARICKDLSSIGDTVVISVTKEGVKFST+GDIG ANIVCRQNT
Sbjct: 127  GIPEAEYHAIVKMPSSEFARICKDLSSIGDTVVISVTKEGVKFSTKGDIGTANIVCRQNT 186

Query: 1069 TVDKPEEATIIEMQEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYKVADMGY 1248
            +VDKPEEAT+IEM EPVSLTFALRYMNSFTKATPLSNTVTISLS+ELPVVVEYK+A+MGY
Sbjct: 187  SVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSNELPVVVEYKIAEMGY 246

Query: 1249 IRFYLAPKI-EDDEDMKPEV 1305
            +RFYLAPKI ED+ED KP+V
Sbjct: 247  VRFYLAPKIEEDEEDTKPQV 266


>ref|XP_004143139.1| PREDICTED: proliferating cell nuclear antigen-like [Cucumis sativus]
          Length = 266

 Score =  475 bits (1223), Expect = e-131
 Identities = 236/259 (91%), Positives = 253/259 (97%), Gaps = 1/259 (0%)
 Frame = +1

Query: 529  VQGSLLKKVLEAIKELVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNL 708
            VQGSLLKKVLE+IK+LV DANFDCSATGFSLQAMDSSHVALVALLLR+EGFEHYRCDRN+
Sbjct: 7    VQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRAEGFEHYRCDRNI 66

Query: 709  SMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPNQDKIADFEMKLMDIDSEHL 888
            SMGMNLNN+SKMLKCAGNDDIIT+KADDGSDTVTFMFESP QDKI+DFEMKLMDIDSEHL
Sbjct: 67   SMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHL 126

Query: 889  GIPEAEYHAIVKMPSTEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGNANIVCRQNT 1068
            GIP+AEYHAIV+MPS EFARICKDLSSIGDTVVISVTKEGVKFSTRGDIG+ANIVCRQNT
Sbjct: 127  GIPDAEYHAIVRMPSVEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANIVCRQNT 186

Query: 1069 TVDKPEEATIIEMQEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYKVADMGY 1248
            TVDKPEEAT+IEM EPVSLTFALRYMNSFTKATPLSNTVTISLSS+LPVVVEYK+A+MGY
Sbjct: 187  TVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYKIAEMGY 246

Query: 1249 IRFYLAPKIEDDE-DMKPE 1302
            +RFYLAPKIE+DE D KP+
Sbjct: 247  VRFYLAPKIEEDEDDTKPQ 265


>ref|XP_003551328.1| PREDICTED: proliferating cell nuclear antigen-like [Glycine max]
          Length = 266

 Score =  475 bits (1222), Expect = e-131
 Identities = 236/260 (90%), Positives = 253/260 (97%), Gaps = 1/260 (0%)
 Frame = +1

Query: 529  VQGSLLKKVLEAIKELVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNL 708
            VQGSLLKKVLE+IKELV DANFDCS+TGFSLQAMDSSHVALVALLLRSEGFEHYRCDRN 
Sbjct: 7    VQGSLLKKVLESIKELVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNT 66

Query: 709  SMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPNQDKIADFEMKLMDIDSEHL 888
            SMGMNLNN++KMLKCAGNDDIIT+KADDGSDTVTFMFESP QDKI+DFEMKLMDIDSEHL
Sbjct: 67   SMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHL 126

Query: 889  GIPEAEYHAIVKMPSTEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGNANIVCRQNT 1068
            GIPEAEYHAIVKMPS+EFARICKDLSSIGDTVVIS+TKEGVKFST+GDIG ANIVCRQNT
Sbjct: 127  GIPEAEYHAIVKMPSSEFARICKDLSSIGDTVVISITKEGVKFSTKGDIGTANIVCRQNT 186

Query: 1069 TVDKPEEATIIEMQEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYKVADMGY 1248
            +VDKPEEAT+IEM EPVSLTFALRYMNSFTKATPLSNTVTISLS+ELPVVVEYK+A+MGY
Sbjct: 187  SVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSNELPVVVEYKIAEMGY 246

Query: 1249 IRFYLAPKI-EDDEDMKPEV 1305
            +RFYLAPKI ED+ED KP+V
Sbjct: 247  VRFYLAPKIEEDEEDTKPQV 266


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