BLASTX nr result

ID: Dioscorea21_contig00023580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023580
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266298.2| PREDICTED: thymidine kinase-like [Vitis vini...   320   6e-85
ref|XP_002323138.1| predicted protein [Populus trichocarpa] gi|2...   315   1e-83
gb|AFK41956.1| unknown [Lotus japonicus]                              313   8e-83
gb|AAO17013.1| Putative thymidine kinase [Oryza sativa Japonica ...   312   1e-82
ref|XP_003547281.1| PREDICTED: thymidine kinase-like [Glycine max]    312   1e-82

>ref|XP_002266298.2| PREDICTED: thymidine kinase-like [Vitis vinifera]
          Length = 283

 Score =  320 bits (819), Expect = 6e-85
 Identities = 156/201 (77%), Positives = 177/201 (88%), Gaps = 1/201 (0%)
 Frame = -2

Query: 1028 SFGEIHVIVGPMFAGKTTALIQRVQLETDQGRKAAMIKSDKDTRYGLDSIVSHDGFKMPC 849
            S GEIHVIVGPMF+GKTT L++R+Q ET  GRK A+IKS+KDTRYGLDSIV+HDG K+PC
Sbjct: 79   SSGEIHVIVGPMFSGKTTTLLRRIQSETSNGRKVAIIKSNKDTRYGLDSIVTHDGVKLPC 138

Query: 848  WALPDLSSFPAKVGPLAYDELDVIGIDEAQFFGDLYDFCRNAADHDGKTVVVAGLDGDYL 669
            WAL DLSSF  K+G  AYDELDVIGIDEAQFFGDLY+FC  AADHDGKTV+VAGLDGDYL
Sbjct: 139  WALADLSSFREKLGSDAYDELDVIGIDEAQFFGDLYEFCCKAADHDGKTVIVAGLDGDYL 198

Query: 668  RRRFGSVLDLIPIADSVTKLTARCGLCEQRACFTLRKTNDTEKELIGGADVYMPVCRQHY 489
            RR FGSVLD+IP+ADSVTKLTARC +C +RA FTLRKT + + ELIGGADVYMPVCRQHY
Sbjct: 199  RRSFGSVLDIIPLADSVTKLTARCEICGKRAFFTLRKTAEKKTELIGGADVYMPVCRQHY 258

Query: 488  VKGQIVV-EAARIVLESQKIK 429
            V GQ+V+ EA RIVLESQK++
Sbjct: 259  VSGQVVIEEATRIVLESQKVQ 279


>ref|XP_002323138.1| predicted protein [Populus trichocarpa] gi|222867768|gb|EEF04899.1|
            predicted protein [Populus trichocarpa]
          Length = 228

 Score =  315 bits (808), Expect = 1e-83
 Identities = 153/200 (76%), Positives = 171/200 (85%)
 Frame = -2

Query: 1034 SPSFGEIHVIVGPMFAGKTTALIQRVQLETDQGRKAAMIKSDKDTRYGLDSIVSHDGFKM 855
            S S GEIHVIVGPMFAGKTT L+ RVQ E + GR  A+IKS+KD RYGLDS+V+HDG K+
Sbjct: 22   SSSSGEIHVIVGPMFAGKTTTLLHRVQAEINDGRNVAIIKSNKDNRYGLDSVVTHDGVKL 81

Query: 854  PCWALPDLSSFPAKVGPLAYDELDVIGIDEAQFFGDLYDFCRNAADHDGKTVVVAGLDGD 675
            PC ALP+LSSF    G  AYD+LDVIGIDEAQFFGDLYDFCR  ADHDGKTV+VAGLDGD
Sbjct: 82   PCCALPNLSSFKQSFGQDAYDQLDVIGIDEAQFFGDLYDFCREVADHDGKTVIVAGLDGD 141

Query: 674  YLRRRFGSVLDLIPIADSVTKLTARCGLCEQRACFTLRKTNDTEKELIGGADVYMPVCRQ 495
            YLRR FGSVLD+IP+ADSVTKL+ARC +C +RA FTLRKT +T  ELIGGADVYMPVCRQ
Sbjct: 142  YLRRSFGSVLDIIPLADSVTKLSARCEICGKRAFFTLRKTEETRTELIGGADVYMPVCRQ 201

Query: 494  HYVKGQIVVEAARIVLESQK 435
            HYV GQ+ VEAAR+VLESQK
Sbjct: 202  HYVSGQVAVEAARMVLESQK 221


>gb|AFK41956.1| unknown [Lotus japonicus]
          Length = 279

 Score =  313 bits (801), Expect = 8e-83
 Identities = 150/206 (72%), Positives = 175/206 (84%)
 Frame = -2

Query: 1046 AATHSPSFGEIHVIVGPMFAGKTTALIQRVQLETDQGRKAAMIKSDKDTRYGLDSIVSHD 867
            ++  + S GEIHVIVGPMFAGKTT+LI+R+Q E+  GR  A+IKS KDTRYGLDSIV+HD
Sbjct: 69   SSASASSSGEIHVIVGPMFAGKTTSLIRRIQSESGNGRNVAIIKSSKDTRYGLDSIVTHD 128

Query: 866  GFKMPCWALPDLSSFPAKVGPLAYDELDVIGIDEAQFFGDLYDFCRNAADHDGKTVVVAG 687
            G K+PCWAL +LSSF  K G  AY++LDVIGIDEAQFF DLYDFCR AADHDGKTVVVAG
Sbjct: 129  GTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFFDDLYDFCREAADHDGKTVVVAG 188

Query: 686  LDGDYLRRRFGSVLDLIPIADSVTKLTARCGLCEQRACFTLRKTNDTEKELIGGADVYMP 507
            LDG+YLRR FGSVLD+IP+ADSVTKLTARC +C + A FTLRKT +T+ ELIGG DVYMP
Sbjct: 189  LDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFTLRKTQETQVELIGGVDVYMP 248

Query: 506  VCRQHYVKGQIVVEAARIVLESQKIK 429
            VCRQHYV GQ+ +E  R+VLESQK++
Sbjct: 249  VCRQHYVNGQVAMETTRLVLESQKVE 274


>gb|AAO17013.1| Putative thymidine kinase [Oryza sativa Japonica Group]
            gi|125584671|gb|EAZ25335.1| hypothetical protein
            OsJ_09147 [Oryza sativa Japonica Group]
          Length = 270

 Score =  312 bits (800), Expect = 1e-82
 Identities = 153/205 (74%), Positives = 176/205 (85%), Gaps = 1/205 (0%)
 Frame = -2

Query: 1031 PSF-GEIHVIVGPMFAGKTTALIQRVQLETDQGRKAAMIKSDKDTRYGLDSIVSHDGFKM 855
            PS+ GEIHVIVGPMFAGKTTAL++RVQ+E   GR  A+IKSDKD RYGLDS+V+HDG KM
Sbjct: 63   PSYPGEIHVIVGPMFAGKTTALLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHDGTKM 122

Query: 854  PCWALPDLSSFPAKVGPLAYDELDVIGIDEAQFFGDLYDFCRNAADHDGKTVVVAGLDGD 675
            PCWALP+LSSF  K+G  AYD++DVIGIDEAQFF DL+DFC  AAD DGK VVVAGLDGD
Sbjct: 123  PCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVAGLDGD 182

Query: 674  YLRRRFGSVLDLIPIADSVTKLTARCGLCEQRACFTLRKTNDTEKELIGGADVYMPVCRQ 495
            Y R +FGSVLD+IP+ADSVTKLTARC LC +RA FTLRKT +T+ ELIGGADVYMPVCRQ
Sbjct: 183  YKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGGADVYMPVCRQ 242

Query: 494  HYVKGQIVVEAARIVLESQKIKL*H 420
            HY+ GQIV+EA RIVL+ +K K+ H
Sbjct: 243  HYLDGQIVIEATRIVLDLEKSKVIH 267


>ref|XP_003547281.1| PREDICTED: thymidine kinase-like [Glycine max]
          Length = 279

 Score =  312 bits (800), Expect = 1e-82
 Identities = 149/201 (74%), Positives = 172/201 (85%)
 Frame = -2

Query: 1031 PSFGEIHVIVGPMFAGKTTALIQRVQLETDQGRKAAMIKSDKDTRYGLDSIVSHDGFKMP 852
            P  GEIHVIVGPMFAGKTT+L++R+Q ET  GR  A+IKS KDTRYGLDSIV+HDG K+P
Sbjct: 74   PPSGEIHVIVGPMFAGKTTSLLRRIQSETANGRNVAIIKSSKDTRYGLDSIVTHDGAKLP 133

Query: 851  CWALPDLSSFPAKVGPLAYDELDVIGIDEAQFFGDLYDFCRNAADHDGKTVVVAGLDGDY 672
            CWAL +LSSF  K G  AY++LDVIGIDEAQFF DLY+FCR AADHDGKTV+VAGLDG+Y
Sbjct: 134  CWALANLSSFKQKFGMDAYEKLDVIGIDEAQFFDDLYEFCRQAADHDGKTVIVAGLDGNY 193

Query: 671  LRRRFGSVLDLIPIADSVTKLTARCGLCEQRACFTLRKTNDTEKELIGGADVYMPVCRQH 492
            LRR FGSVLD+IP+ADSVTKLTARC +C +RACFTLRKT D + ELIGG DVYMPVCRQH
Sbjct: 194  LRRSFGSVLDIIPLADSVTKLTARCEICGKRACFTLRKTQDKQIELIGGVDVYMPVCRQH 253

Query: 491  YVKGQIVVEAARIVLESQKIK 429
            Y  GQ+ +EA R VLES+K++
Sbjct: 254  YASGQVAMEATRHVLESKKVE 274


Top