BLASTX nr result

ID: Dioscorea21_contig00023492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023492
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ88046.1| predicted protein [Hordeum vulgare subsp. vulgare]    114   1e-23
dbj|BAJ86764.1| predicted protein [Hordeum vulgare subsp. vulgare]    114   1e-23
gb|EAY82057.1| hypothetical protein OsI_37250 [Oryza sativa Indi...   112   4e-23
ref|NP_001065599.1| Os11g0118600 [Oryza sativa Japonica Group] g...   110   2e-22
ref|XP_002450160.1| hypothetical protein SORBIDRAFT_05g001310 [S...   106   4e-21

>dbj|BAJ88046.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 402

 Score =  114 bits (285), Expect = 1e-23
 Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
 Frame = -2

Query: 621 INFTNVAAVLNGM-TPQCVWFNLDGLPEFRELMSENVCSTYRQGHFSIVVNSTGL--AXX 451
           +NF+NV AV  G   PQCVWF+LDG+P+FR L + NVC+TYR+GHFSIVVNS+ +  A  
Sbjct: 247 VNFSNVRAVPPGSPAPQCVWFDLDGVPQFRALEANNVCATYRRGHFSIVVNSSEVAPAPG 306

Query: 450 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRQNRKVAEMER 271
                                                           +++ +K+  MER
Sbjct: 307 PSGAIAPPIPTDGGRDKGSSDAWKIAVGVVGGVIALGLLALLLVCFLRYKKEKKMEVMER 366

Query: 270 QADVGEALRMTRVGSTQAPVATGTRTQPILENEYVA 163
            A+VGE LRM +VG TQAPVA GTRT+P++E+EYVA
Sbjct: 367 NAEVGETLRMAQVGRTQAPVAFGTRTKPVIESEYVA 402


>dbj|BAJ86764.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 312

 Score =  114 bits (285), Expect = 1e-23
 Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
 Frame = -2

Query: 621 INFTNVAAVLNGM-TPQCVWFNLDGLPEFRELMSENVCSTYRQGHFSIVVNSTGL--AXX 451
           +NF+NV AV  G   PQCVWF+LDG+P+FR L + NVC+TYR+GHFSIVVNS+ +  A  
Sbjct: 157 VNFSNVRAVPPGSPAPQCVWFDLDGVPQFRALEANNVCATYRRGHFSIVVNSSEVAPAPG 216

Query: 450 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRQNRKVAEMER 271
                                                           +++ +K+  MER
Sbjct: 217 PSGAIAPPIPTDGGRDKGSSDAWKIAVGVVGGVIALGLLALLLVCFLRYKKEKKMEVMER 276

Query: 270 QADVGEALRMTRVGSTQAPVATGTRTQPILENEYVA 163
            A+VGE LRM +VG TQAPVA GTRT+P++E+EYVA
Sbjct: 277 NAEVGETLRMAQVGRTQAPVAFGTRTKPVIESEYVA 312


>gb|EAY82057.1| hypothetical protein OsI_37250 [Oryza sativa Indica Group]
          Length = 312

 Score =  112 bits (281), Expect = 4e-23
 Identities = 63/156 (40%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
 Frame = -2

Query: 621 INFTNVAAV-LNGMTPQCVWFNLDGLPEFRELMSENVCSTYRQGHFSIVVNSTGL--AXX 451
           INF++V +V   G  P+CVWF+LDG+P+FR+L + NVCSTYR+GHFSIVVNS+ +     
Sbjct: 157 INFSDVRSVPAGGPAPRCVWFDLDGVPQFRDLEASNVCSTYRRGHFSIVVNSSVIPPGPV 216

Query: 450 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRQNRKVAEMER 271
                                                           +++++K+A MER
Sbjct: 217 PSGNITPPIPTPTGRSKGSSNGWKIAVGVVGGIIALVLLASLVVCFARYKRDKKLALMER 276

Query: 270 QADVGEALRMTRVGSTQAPVATGTRTQPILENEYVA 163
            A+ GE LRM +VG +QAPVA GTRTQP++E+EYVA
Sbjct: 277 NAETGETLRMAQVGRSQAPVALGTRTQPVIESEYVA 312


>ref|NP_001065599.1| Os11g0118600 [Oryza sativa Japonica Group]
           gi|297612554|ref|NP_001066004.2| Os12g0117800 [Oryza
           sativa Japonica Group] gi|77548381|gb|ABA91178.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|77552855|gb|ABA95651.1| expressed protein [Oryza
           sativa Japonica Group] gi|113644303|dbj|BAF27444.1|
           Os11g0118600 [Oryza sativa Japonica Group]
           gi|125533187|gb|EAY79735.1| hypothetical protein
           OsI_34892 [Oryza sativa Indica Group]
           gi|125576004|gb|EAZ17226.1| hypothetical protein
           OsJ_32742 [Oryza sativa Japonica Group]
           gi|125578309|gb|EAZ19455.1| hypothetical protein
           OsJ_35018 [Oryza sativa Japonica Group]
           gi|215768385|dbj|BAH00614.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255669990|dbj|BAF29023.2| Os12g0117800 [Oryza sativa
           Japonica Group]
          Length = 312

 Score =  110 bits (275), Expect = 2e-22
 Identities = 61/156 (39%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
 Frame = -2

Query: 621 INFTNVAAV-LNGMTPQCVWFNLDGLPEFRELMSENVCSTYRQGHFSIVVNSTGL--AXX 451
           INF++V +V   G  P+CVWF+LDG+P+FR+L + NVCSTYR+GHFSIVVNS+ +     
Sbjct: 157 INFSDVRSVPAGGPAPRCVWFDLDGVPQFRDLEASNVCSTYRRGHFSIVVNSSAIPPGPV 216

Query: 450 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRQNRKVAEMER 271
                                                           +++++K+  ME+
Sbjct: 217 PSGNITPPIPTPTGRSKGSSKGWKIAVGVVGGVIALVLLASLVVCLARYKRDKKLELMEQ 276

Query: 270 QADVGEALRMTRVGSTQAPVATGTRTQPILENEYVA 163
            A+ GE LRM +VG +QAPVA GTRTQP++E+EYVA
Sbjct: 277 NAETGETLRMAQVGRSQAPVALGTRTQPVIESEYVA 312


>ref|XP_002450160.1| hypothetical protein SORBIDRAFT_05g001310 [Sorghum bicolor]
           gi|241936003|gb|EES09148.1| hypothetical protein
           SORBIDRAFT_05g001310 [Sorghum bicolor]
          Length = 321

 Score =  106 bits (264), Expect = 4e-21
 Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
 Frame = -2

Query: 609 NVAAVLNGMT-PQCVWFNLDGLPEFRELMSENVCSTYRQGHFSIVVNSTGLAXXXXXXXX 433
           NV AV  G   P+CV F+LDG+P+FR+L++ ++CSTY QGH SIVVNS+G+A        
Sbjct: 171 NVRAVPAGSAAPRCVVFDLDGMPQFRDLVATDMCSTYHQGHVSIVVNSSGIAPAPPPGTI 230

Query: 432 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-HRQNRKVAEMERQADVG 256
                                                    + H++++K+  MER A+VG
Sbjct: 231 PPPIPTAGGNKKGSSKAWKIAGSVVGAAIALGLLAALLLCLVRHKRDKKLQVMERNAEVG 290

Query: 255 EALRMTRVGSTQAPVATGTRTQPILENEYVA 163
           E LRM +VG TQAPVA GTRTQP++EN+Y A
Sbjct: 291 ETLRMAQVGRTQAPVALGTRTQPVIENDYTA 321


Top