BLASTX nr result

ID: Dioscorea21_contig00023484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023484
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517275.1| DNA binding protein, putative [Ricinus commu...    68   4e-09
ref|XP_003568454.1| PREDICTED: uncharacterized protein LOC100835...    65   3e-08
ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|2...    64   5e-08
ref|NP_001055539.1| Os05g0412000 [Oryza sativa Japonica Group] g...    64   5e-08
ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256...    62   3e-07

>ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
           gi|223543538|gb|EEF45068.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 315

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 40/84 (47%), Positives = 46/84 (54%)
 Frame = +1

Query: 4   QQQRHLGHFGSPPGNGFADHGFLTRAVGQPGLHRMVGPGGVGIVQTXXXXXXXXSTAGSY 183
           Q  R +GHFGSPP NG  DH FL R   QP +HR+  P                +T   Y
Sbjct: 248 QYHRQMGHFGSPP-NGQFDHPFLARQSQQP-VHRIGAP--------------VHNTVPGY 291

Query: 184 VEDLESGTGGGNRRVLTLFPTNED 255
           VEDLES  G G R+VLTLFPT +D
Sbjct: 292 VEDLESANGNGGRKVLTLFPTGDD 315


>ref|XP_003568454.1| PREDICTED: uncharacterized protein LOC100835635 [Brachypodium
           distachyon]
          Length = 326

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 42/97 (43%), Positives = 51/97 (52%), Gaps = 16/97 (16%)
 Frame = +1

Query: 13  RHLGHFGS--PPGNGFADHGFLTRAV-------GQPGLHRMVGPGGVGIVQTXXXXXXXX 165
           R LGH+G+  P G G  DHGFL+RAV       G PG+HRMVG GG              
Sbjct: 239 RPLGHYGAAGPVGGGGFDHGFLSRAVASGGAPVGPPGMHRMVGGGGA----------MGM 288

Query: 166 STAGSYVEDLESGT-------GGGNRRVLTLFPTNED 255
               S+ ++LE G+       GGG RR LTLFPT+ D
Sbjct: 289 MAPSSFADELELGSRGGGGGGGGGGRRELTLFPTSGD 325


>ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|222854845|gb|EEE92392.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 39/84 (46%), Positives = 45/84 (53%)
 Frame = +1

Query: 4   QQQRHLGHFGSPPGNGFADHGFLTRAVGQPGLHRMVGPGGVGIVQTXXXXXXXXSTAGSY 183
           Q  R +GHFGSP  NG  +H FL R   QP +HRM  P                +T   Y
Sbjct: 251 QYHRQMGHFGSPT-NGQFEHPFLPRQTQQP-VHRMGAP--------------VPNTVPGY 294

Query: 184 VEDLESGTGGGNRRVLTLFPTNED 255
           VEDLES  G G R+VLTLFPT +D
Sbjct: 295 VEDLESVNGNGGRKVLTLFPTGDD 318


>ref|NP_001055539.1| Os05g0412000 [Oryza sativa Japonica Group]
           gi|50878489|gb|AAT85262.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|51038221|gb|AAT94024.1|
           hypothetical protein [Oryza sativa Japonica Group]
           gi|113579090|dbj|BAF17453.1| Os05g0412000 [Oryza sativa
           Japonica Group] gi|125552332|gb|EAY98041.1| hypothetical
           protein OsI_19956 [Oryza sativa Indica Group]
           gi|222631588|gb|EEE63720.1| hypothetical protein
           OsJ_18538 [Oryza sativa Japonica Group]
          Length = 331

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 44/94 (46%), Positives = 53/94 (56%), Gaps = 13/94 (13%)
 Frame = +1

Query: 13  RHLGHFGSPPGNGFADHGFLTRAV-------GQPGLH-RMVGPG-GVGIVQTXXXXXXXX 165
           R LGH+GS PG GF DHGFL+RAV       G PG+H RMVGP  G+ ++          
Sbjct: 249 RPLGHYGSGPGAGF-DHGFLSRAVAGGGPPVGPPGMHHRMVGPAAGMAMM---------- 297

Query: 166 STAGSYVEDLESGT----GGGNRRVLTLFPTNED 255
                + E+LE G+    GGG RR LTLFPT  D
Sbjct: 298 -APSPFAEELELGSRGGGGGGGRRELTLFPTTGD 330


>ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis
           vinifera] gi|359481436|ref|XP_003632618.1| PREDICTED:
           uncharacterized protein LOC100256764 isoform 2 [Vitis
           vinifera]
          Length = 306

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 40/81 (49%), Positives = 45/81 (55%)
 Frame = +1

Query: 13  RHLGHFGSPPGNGFADHGFLTRAVGQPGLHRMVGPGGVGIVQTXXXXXXXXSTAGSYVED 192
           R +GHFGSPP NG  +H FL R   QP +HRM  P                S   +YVED
Sbjct: 243 RQVGHFGSPP-NGQFEHPFLPRQ-SQP-VHRMGAP--------------VHSPVPAYVED 285

Query: 193 LESGTGGGNRRVLTLFPTNED 255
           LES T  G RRVLTLFPT +D
Sbjct: 286 LESATATGGRRVLTLFPTGDD 306