BLASTX nr result
ID: Dioscorea21_contig00023484
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00023484 (1145 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002517275.1| DNA binding protein, putative [Ricinus commu... 68 4e-09 ref|XP_003568454.1| PREDICTED: uncharacterized protein LOC100835... 65 3e-08 ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|2... 64 5e-08 ref|NP_001055539.1| Os05g0412000 [Oryza sativa Japonica Group] g... 64 5e-08 ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256... 62 3e-07 >ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis] gi|223543538|gb|EEF45068.1| DNA binding protein, putative [Ricinus communis] Length = 315 Score = 68.2 bits (165), Expect = 4e-09 Identities = 40/84 (47%), Positives = 46/84 (54%) Frame = +1 Query: 4 QQQRHLGHFGSPPGNGFADHGFLTRAVGQPGLHRMVGPGGVGIVQTXXXXXXXXSTAGSY 183 Q R +GHFGSPP NG DH FL R QP +HR+ P +T Y Sbjct: 248 QYHRQMGHFGSPP-NGQFDHPFLARQSQQP-VHRIGAP--------------VHNTVPGY 291 Query: 184 VEDLESGTGGGNRRVLTLFPTNED 255 VEDLES G G R+VLTLFPT +D Sbjct: 292 VEDLESANGNGGRKVLTLFPTGDD 315 >ref|XP_003568454.1| PREDICTED: uncharacterized protein LOC100835635 [Brachypodium distachyon] Length = 326 Score = 65.1 bits (157), Expect = 3e-08 Identities = 42/97 (43%), Positives = 51/97 (52%), Gaps = 16/97 (16%) Frame = +1 Query: 13 RHLGHFGS--PPGNGFADHGFLTRAV-------GQPGLHRMVGPGGVGIVQTXXXXXXXX 165 R LGH+G+ P G G DHGFL+RAV G PG+HRMVG GG Sbjct: 239 RPLGHYGAAGPVGGGGFDHGFLSRAVASGGAPVGPPGMHRMVGGGGA----------MGM 288 Query: 166 STAGSYVEDLESGT-------GGGNRRVLTLFPTNED 255 S+ ++LE G+ GGG RR LTLFPT+ D Sbjct: 289 MAPSSFADELELGSRGGGGGGGGGGRRELTLFPTSGD 325 >ref|XP_002308869.1| predicted protein [Populus trichocarpa] gi|222854845|gb|EEE92392.1| predicted protein [Populus trichocarpa] Length = 318 Score = 64.3 bits (155), Expect = 5e-08 Identities = 39/84 (46%), Positives = 45/84 (53%) Frame = +1 Query: 4 QQQRHLGHFGSPPGNGFADHGFLTRAVGQPGLHRMVGPGGVGIVQTXXXXXXXXSTAGSY 183 Q R +GHFGSP NG +H FL R QP +HRM P +T Y Sbjct: 251 QYHRQMGHFGSPT-NGQFEHPFLPRQTQQP-VHRMGAP--------------VPNTVPGY 294 Query: 184 VEDLESGTGGGNRRVLTLFPTNED 255 VEDLES G G R+VLTLFPT +D Sbjct: 295 VEDLESVNGNGGRKVLTLFPTGDD 318 >ref|NP_001055539.1| Os05g0412000 [Oryza sativa Japonica Group] gi|50878489|gb|AAT85262.1| hypothetical protein [Oryza sativa Japonica Group] gi|51038221|gb|AAT94024.1| hypothetical protein [Oryza sativa Japonica Group] gi|113579090|dbj|BAF17453.1| Os05g0412000 [Oryza sativa Japonica Group] gi|125552332|gb|EAY98041.1| hypothetical protein OsI_19956 [Oryza sativa Indica Group] gi|222631588|gb|EEE63720.1| hypothetical protein OsJ_18538 [Oryza sativa Japonica Group] Length = 331 Score = 64.3 bits (155), Expect = 5e-08 Identities = 44/94 (46%), Positives = 53/94 (56%), Gaps = 13/94 (13%) Frame = +1 Query: 13 RHLGHFGSPPGNGFADHGFLTRAV-------GQPGLH-RMVGPG-GVGIVQTXXXXXXXX 165 R LGH+GS PG GF DHGFL+RAV G PG+H RMVGP G+ ++ Sbjct: 249 RPLGHYGSGPGAGF-DHGFLSRAVAGGGPPVGPPGMHHRMVGPAAGMAMM---------- 297 Query: 166 STAGSYVEDLESGT----GGGNRRVLTLFPTNED 255 + E+LE G+ GGG RR LTLFPT D Sbjct: 298 -APSPFAEELELGSRGGGGGGGRRELTLFPTTGD 330 >ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis vinifera] gi|359481436|ref|XP_003632618.1| PREDICTED: uncharacterized protein LOC100256764 isoform 2 [Vitis vinifera] Length = 306 Score = 62.0 bits (149), Expect = 3e-07 Identities = 40/81 (49%), Positives = 45/81 (55%) Frame = +1 Query: 13 RHLGHFGSPPGNGFADHGFLTRAVGQPGLHRMVGPGGVGIVQTXXXXXXXXSTAGSYVED 192 R +GHFGSPP NG +H FL R QP +HRM P S +YVED Sbjct: 243 RQVGHFGSPP-NGQFEHPFLPRQ-SQP-VHRMGAP--------------VHSPVPAYVED 285 Query: 193 LESGTGGGNRRVLTLFPTNED 255 LES T G RRVLTLFPT +D Sbjct: 286 LESATATGGRRVLTLFPTGDD 306