BLASTX nr result

ID: Dioscorea21_contig00023471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023471
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529001.1| PREDICTED: ubiquitin-like-conjugating enzyme...    65   7e-09
ref|XP_002270982.2| PREDICTED: ubiquitin-like-conjugating enzyme...    59   3e-07
ref|XP_003521016.1| PREDICTED: ubiquitin-like-conjugating enzyme...    57   1e-06
gb|ACU24530.1| unknown [Glycine max]                                   57   1e-06
ref|XP_002884654.1| autophagocytosis-associated family protein [...    56   3e-06

>ref|XP_003529001.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Glycine
           max]
          Length = 238

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/114 (34%), Positives = 52/114 (45%)
 Frame = +1

Query: 82  MSNLEVWDGTISQKDFYVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTLVERWKQV 261
           + ++  WDGT+S  DF ++                                T  E+WK+ 
Sbjct: 7   VKDIIAWDGTLSSSDFSLSA------------------------------HTFSEKWKRF 36

Query: 262 NPSLPQWTWIPSKSTLMGSSCKEEGYLSLENMFHIDRNEECLIVESLSEGEETN 423
           NPS P W WIP     + +S K EGYLSLENM HI  +EE     SL+  EE+N
Sbjct: 37  NPSFPPWQWIPCLKHHLVASHKVEGYLSLENMCHIKSSEEEESDRSLTWKEESN 90


>ref|XP_002270982.2| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Vitis
           vinifera] gi|302144207|emb|CBI23334.3| unnamed protein
           product [Vitis vinifera]
          Length = 230

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
 Frame = +1

Query: 88  NLEVWDGTISQKDFYVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTLVERWKQVNP 267
           ++  WDGT+S  DF +A                                   E+WK++NP
Sbjct: 2   DISSWDGTLSSSDFCLAA------------------------------HAFTEKWKRINP 31

Query: 268 SLPQWTWIPSKSTLMGSSCKEEGYLSLENMFHIDRNEECLIVESLSEGEETN-------- 423
            LP W+W+P   +   +S + EGYLSLENM  +   EE    +S    EE N        
Sbjct: 32  VLPPWSWVPRPKSPWLTSHEVEGYLSLENMCILRSCEEDHDEKSHKGNEEPNCPGKDEYI 91

Query: 424 DVATLVHSTSNE 459
           D ATLV S S++
Sbjct: 92  DNATLVQSYSHD 103


>ref|XP_003521016.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Glycine
           max]
          Length = 240

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 43/124 (34%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
 Frame = +1

Query: 100 WDGTISQKDFYVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTLVERWKQVNPSLPQ 279
           WDGT+S  DF ++                                T  ++WK+ NPS P 
Sbjct: 14  WDGTLSSFDFSLSA------------------------------HTFSDKWKRFNPSFPA 43

Query: 280 WTWI--PSKSTLMGSSCKEEGYLSLENMFHIDRNEECLIVESLSEGEETN--------DV 429
           W WI  P +  L+ S  K EGYLSLENM HI  ++E     SL+  EE+N        D 
Sbjct: 44  WQWITCPKQHHLVASH-KVEGYLSLENMCHIKSSQEQESDRSLTWKEESNISQREEPFDK 102

Query: 430 ATLV 441
           ATLV
Sbjct: 103 ATLV 106


>gb|ACU24530.1| unknown [Glycine max]
          Length = 240

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 43/124 (34%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
 Frame = +1

Query: 100 WDGTISQKDFYVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTLVERWKQVNPSLPQ 279
           WDGT+S  DF ++                                T  ++WK+ NPS P 
Sbjct: 14  WDGTLSSFDFSLSA------------------------------HTFSDKWKRFNPSFPA 43

Query: 280 WTWI--PSKSTLMGSSCKEEGYLSLENMFHIDRNEECLIVESLSEGEETN--------DV 429
           W WI  P +  L+ S  K EGYLSLENM HI  ++E     SL+  EE+N        D 
Sbjct: 44  WKWITCPKQHHLVASH-KVEGYLSLENMCHIKSSQEQESDRSLTWKEESNISQREEPFDK 102

Query: 430 ATLV 441
           ATLV
Sbjct: 103 ATLV 106


>ref|XP_002884654.1| autophagocytosis-associated family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330494|gb|EFH60913.1|
           autophagocytosis-associated family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 225

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
 Frame = +1

Query: 232 RTLVERWKQVNPSLPQWTWIP-SKSTLMGSSCKEEGYLSLENMF------HIDRNEECLI 390
           RT  +RWK  N + P W+WIP    TL+ S+ +EEGYLSLE +        I  +E   +
Sbjct: 22  RTFADRWKIHNQAFPPWSWIPLINRTLLVSNKQEEGYLSLEKIIILSSLDEIPEDESLNV 81

Query: 391 VESLSEGEETNDVATLVHSTSNE 459
               SE EE+ D   LV +  NE
Sbjct: 82  ATDCSEKEESIDHTILVPTLENE 104


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