BLASTX nr result

ID: Dioscorea21_contig00023453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023453
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326041.1| predicted protein [Populus trichocarpa] gi|2...   255   3e-66
ref|XP_002326040.1| predicted protein [Populus trichocarpa] gi|2...   249   2e-64
gb|ABK95688.1| unknown [Populus trichocarpa]                          248   3e-64
ref|XP_002274905.1| PREDICTED: chitinase 5-like isoform 1 [Vitis...   248   4e-64
gb|AAC49435.1| class IV chitinase EP3-1/H5, partial [Daucus carota]   248   5e-64

>ref|XP_002326041.1| predicted protein [Populus trichocarpa] gi|222862916|gb|EEF00423.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  255 bits (651), Expect = 3e-66
 Identities = 118/180 (65%), Positives = 138/180 (76%), Gaps = 2/180 (1%)
 Frame = +3

Query: 3   YCGSGNDYCGDGCQQGPCYNNXXXXXXXXX-AVNDIVTSAFFDGIASQAGDGCAGKGFYT 179
           YCG+GNDYCG GC+QGPC ++          +V DIVT  FF+GI SQA  GCAGK FYT
Sbjct: 42  YCGTGNDYCGQGCKQGPCSSSPTPTTPSGSGSVADIVTPGFFNGIISQAPAGCAGKNFYT 101

Query: 180 RDAFLSAASSFPDFGTTGGIDVEKREIAAFFAHATHETGHFCYIEEINGANNNYC-QASQ 356
           RDAFLSA +S+P FG  G ++  KREIAAFFAH THETGHFCYIEEINGA+ +YC + ++
Sbjct: 102 RDAFLSAVNSYPQFGKLGSVEASKREIAAFFAHVTHETGHFCYIEEINGASGDYCDENNR 161

Query: 357 EYPCNPDKKYFGRGPLQLSWNYNYIDAGNALNFDGLNAPETVANDNVISFKSALWFWDTR 536
           EYPC P KKY+GRGPLQLSWNYNY  AG + NFDGLN P+ VA D V+SFK+ALWFW  R
Sbjct: 162 EYPCVPGKKYYGRGPLQLSWNYNYGPAGRSNNFDGLNNPDIVARDAVVSFKTALWFWMNR 221


>ref|XP_002326040.1| predicted protein [Populus trichocarpa] gi|222862915|gb|EEF00422.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  249 bits (636), Expect = 2e-64
 Identities = 115/178 (64%), Positives = 136/178 (76%), Gaps = 1/178 (0%)
 Frame = +3

Query: 3   YCGSGNDYCGDGCQQGPCYNNXXXXXXXXXAVNDIVTSAFFDGIASQAGDGCAGKGFYTR 182
           +CG+G+ YCG GC++GPC             V D+VT  FF+GI +QAG  CAGK FYTR
Sbjct: 40  FCGTGDAYCGQGCREGPC--TPSTPSNNDVTVADVVTPEFFNGIINQAGGDCAGKSFYTR 97

Query: 183 DAFLSAASSFPDFGTTGGIDVEKREIAAFFAHATHETGHFCYIEEINGANNNYC-QASQE 359
           DAFLSA +S+  FG  G  D  KREIAAFFAH THETGHFCYIEEINGA+++YC + + +
Sbjct: 98  DAFLSALNSYSQFGKIGSNDDSKREIAAFFAHVTHETGHFCYIEEINGASHDYCDETNTQ 157

Query: 360 YPCNPDKKYFGRGPLQLSWNYNYIDAGNALNFDGLNAPETVANDNVISFKSALWFWDT 533
           YPCNP+K YFGRGPLQL+WNYNY  AG A NFDGLN+PETVAND V+SFK+ALWFW T
Sbjct: 158 YPCNPNKNYFGRGPLQLTWNYNYGAAGGANNFDGLNSPETVANDPVVSFKTALWFWMT 215


>gb|ABK95688.1| unknown [Populus trichocarpa]
          Length = 274

 Score =  248 bits (634), Expect = 3e-64
 Identities = 116/180 (64%), Positives = 136/180 (75%), Gaps = 2/180 (1%)
 Frame = +3

Query: 3   YCGSGNDYCGDGCQQGPCYNNXXXXXXXXX-AVNDIVTSAFFDGIASQAGDGCAGKGFYT 179
           YCG+GN YCG GC+QGPC ++          +V DIVT AFF+GI SQA   CAGK FYT
Sbjct: 42  YCGTGNAYCGQGCKQGPCNSSPTPTTPSGSGSVADIVTPAFFNGIISQAAASCAGKNFYT 101

Query: 180 RDAFLSAASSFPDFGTTGGIDVEKREIAAFFAHATHETGHFCYIEEINGANNNYC-QASQ 356
           R+AFLSA +S+P FG  G  +  KREIAAFFAH THETGHFCYIEEINGA+ +YC + ++
Sbjct: 102 RNAFLSAVNSYPQFGKLGSAEASKREIAAFFAHVTHETGHFCYIEEINGASGDYCDENNR 161

Query: 357 EYPCNPDKKYFGRGPLQLSWNYNYIDAGNALNFDGLNAPETVANDNVISFKSALWFWDTR 536
           EYPC P KKY+GRGPLQLSWNYNY  AG + NFDGLN P+ VA D V+SFK+ALWFW  R
Sbjct: 162 EYPCVPGKKYYGRGPLQLSWNYNYGPAGRSNNFDGLNNPDIVARDAVVSFKTALWFWMNR 221


>ref|XP_002274905.1| PREDICTED: chitinase 5-like isoform 1 [Vitis vinifera]
          Length = 267

 Score =  248 bits (633), Expect = 4e-64
 Identities = 110/176 (62%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
 Frame = +3

Query: 3   YCGSGNDYCGDGCQQGPCYNNXXXXXXXXXAVNDIVTSAFFDGIASQAGDGCAGKGFYTR 182
           YCG+G+DYCG GCQ GPCY++         +V+D+VT  FF+GI SQA   CAGK FY+R
Sbjct: 36  YCGTGDDYCGTGCQAGPCYSSGGGGGNGSVSVSDVVTEDFFNGIISQAAGSCAGKNFYSR 95

Query: 183 DAFLSAASSFPDFGTTGGIDVEKREIAAFFAHATHETGHFCYIEEINGANNNYC-QASQE 359
           +AFL A SS+P FG  G  D  KREIAAFFAH THETGHFCYIEEI+GA+ +YC +++ +
Sbjct: 96  NAFLDAVSSYPQFGQDGSADDSKREIAAFFAHVTHETGHFCYIEEIDGASKDYCDESNTQ 155

Query: 360 YPCNPDKKYFGRGPLQLSWNYNYIDAGNALNFDGLNAPETVANDNVISFKSALWFW 527
           YPC   K Y+GRGPLQ+SWNYNY  AG ++ FDGLN PETVAND V+SFK+A WFW
Sbjct: 156 YPCVAGKGYYGRGPLQISWNYNYGPAGQSIGFDGLNNPETVANDPVVSFKTAFWFW 211


>gb|AAC49435.1| class IV chitinase EP3-1/H5, partial [Daucus carota]
          Length = 268

 Score =  248 bits (632), Expect = 5e-64
 Identities = 110/178 (61%), Positives = 135/178 (75%)
 Frame = +3

Query: 3   YCGSGNDYCGDGCQQGPCYNNXXXXXXXXXAVNDIVTSAFFDGIASQAGDGCAGKGFYTR 182
           YCG+ +DYCG+GCQ GPC N+         +V DIVT  FF+GI SQA   C GK FYTR
Sbjct: 38  YCGTTSDYCGEGCQAGPCTNSAPSGGGNAVSVADIVTDDFFNGIISQATGDCDGKNFYTR 97

Query: 183 DAFLSAASSFPDFGTTGGIDVEKREIAAFFAHATHETGHFCYIEEINGANNNYCQASQEY 362
            AFL A  S+  FGT+G  D  KREIAAFFAHATHETG+FC+ EE +G ++NYCQ++ EY
Sbjct: 98  SAFLEALQSYSSFGTSGSADDSKREIAAFFAHATHETGYFCHKEETSGRDHNYCQSTAEY 157

Query: 363 PCNPDKKYFGRGPLQLSWNYNYIDAGNALNFDGLNAPETVANDNVISFKSALWFWDTR 536
           PCNP+  YFGRGPLQL+WNYNYIDAGN+ +FDGLN P+ VA+D V+SFK+ALW+W  +
Sbjct: 158 PCNPNVNYFGRGPLQLTWNYNYIDAGNSNDFDGLNNPDIVASDAVVSFKTALWYWKVK 215


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