BLASTX nr result

ID: Dioscorea21_contig00023449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023449
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05794.1| predicted protein [Hordeum vulgare subsp. vulgare]    142   8e-32
ref|XP_003574825.1| PREDICTED: squamosa promoter-binding-like pr...   135   1e-29
ref|NP_001137049.1| squamosa promoter-binding protein-like (SBP ...   107   3e-21
ref|XP_003578390.1| PREDICTED: squamosa promoter-binding-like pr...   105   8e-21
ref|XP_002445815.1| hypothetical protein SORBIDRAFT_07g026220 [S...   105   1e-20

>dbj|BAK05794.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 394

 Score =  142 bits (358), Expect = 8e-32
 Identities = 94/226 (41%), Positives = 131/226 (57%), Gaps = 10/226 (4%)
 Frame = +1

Query: 4   TNHQGIQFTSYPPLFPSTTTPEGLAWPGIIKTEQDTMFIDQQSSSFISRQHNLPSSFYIN 183
           T+ QG +F S+P     T  PE   WPGIIKTE++  +  Q     IS +H+   S    
Sbjct: 175 TSQQGTRFPSFP-----TPRPEQ-NWPGIIKTEENPYYTHQLPLG-ISNRHHFGGSTSTF 227

Query: 184 FKEGKKFPFLQDSEIALSHRISLEASG-----KTI--PSSQSSSMKMLPDGINHILDSEG 342
            KEG++FPFLQ+ EI  +  ++LE +      KT+  P S SSS KM  DG+  +LDS+ 
Sbjct: 228 AKEGRRFPFLQEGEINFATGVALEPAVCQPLLKTVAPPESSSSSSKMFSDGLTPVLDSDC 287

Query: 343 ALSLLSSPVQTAAINLSQMV-PSDRIPVGQPLVXXXXXXXXXXXXXXQASS--SVSPTGF 513
           ALSLLS+P  ++ I++ QMV  ++ IP+ QPL                 +S  +VS TGF
Sbjct: 288 ALSLLSAPANSSGIDVGQMVQQTEHIPIAQPLFSNLQQFSSSSWFSRTQASTGTVSATGF 347

Query: 514 SCSGIDDDHEGNILVSDASDADLPCHGIFPVGGEGSSDGASQALPF 651
           SC  ++++   N+L SD  + DL  +GIF VGGEGSSDGA  +LPF
Sbjct: 348 SCPVVENEQLNNVLTSD--NNDLNYNGIFHVGGEGSSDGAPPSLPF 391


>ref|XP_003574825.1| PREDICTED: squamosa promoter-binding-like protein 16-like
           [Brachypodium distachyon]
          Length = 425

 Score =  135 bits (340), Expect = 1e-29
 Identities = 86/226 (38%), Positives = 124/226 (54%), Gaps = 10/226 (4%)
 Frame = +1

Query: 4   TNHQGIQFTSYPPLFPSTTTPEGLAWPGIIKTEQDTMFIDQQSSSFISRQHNLPSSFYIN 183
           T+ QG +F+ +P   P  +      WPGIIKTE+   +  Q      +RQH    S    
Sbjct: 206 TSQQGTRFSPFPNPRPEQS------WPGIIKTEESPYYAHQIPIGISNRQH-FGGSTSTY 258

Query: 184 FKEGKKFPFLQDSEIALSHRISLEAS------GKTIPSSQSSSMKMLPDGINHILDSEGA 345
            KEG++FPFLQ+ EI  +  ++LE S          P   S S KM  DG+  +LDS+ A
Sbjct: 259 AKEGRRFPFLQEGEINFATGVTLEPSVCQPHPRTAAPPDSSGSSKMFSDGLTPVLDSDCA 318

Query: 346 LSLLSSPVQTAAINLSQMV---PSDRIPVGQPLVXXXXXXXXXXXXXXQASS-SVSPTGF 513
           LSLLS+P  ++ I++ +MV    ++ IP+ QPLV              QA++ +V PTGF
Sbjct: 319 LSLLSAPANSSGIDVGRMVQVQQNEHIPIAQPLVSSLQFSSSSWFARSQAATGAVPPTGF 378

Query: 514 SCSGIDDDHEGNILVSDASDADLPCHGIFPVGGEGSSDGASQALPF 651
           SC  ++++    +L SD ++ +    GIF VGGEGSSDGA  +LPF
Sbjct: 379 SCPVVENEQLNTVLSSDNNEMNY--SGIFHVGGEGSSDGAPPSLPF 422


>ref|NP_001137049.1| squamosa promoter-binding protein-like (SBP domain) transcription
           factor family protein [Zea mays]
           gi|194698154|gb|ACF83161.1| unknown [Zea mays]
           gi|414886152|tpg|DAA62166.1| TPA: squamosa
           promoter-binding protein-like (SBP domain) transcription
           factor family protein [Zea mays]
          Length = 267

 Score =  107 bits (267), Expect = 3e-21
 Identities = 84/265 (31%), Positives = 131/265 (49%), Gaps = 49/265 (18%)
 Frame = +1

Query: 4   TNHQGIQFTSYPPLFPSTTTPEGLAWPGIIKTEQD-TMFIDQQSSSFISRQH-----NLP 165
           T+ QG +F+S+P   P  +      WPG+IK+E   + +  Q+     SR H     + P
Sbjct: 8   TSQQGTRFSSFPVPRPEPS------WPGVIKSEDSGSYYAHQRHPVLSSRPHFAGGGSTP 61

Query: 166 SSFYINFKEGKKFPFLQDS------------------EIALSHRI------SLEASGKTI 273
            ++  + KEG++FPFLQD                   E++ +  +      +  A+    
Sbjct: 62  PAY--SSKEGRRFPFLQDGCDQQQVGGFSAGAGAQQLEVSSTSTVCQPLLKAAAAAAPPP 119

Query: 274 PSSQSSSMKMLPDGINH-ILDSEGALSLLSSPVQTAAINLSQMV---PSDRIPVGQPLVX 441
           P   SSS KM  DG+   +LDS+ ALSLLSSP  ++++++ +MV   P++ IP+ QPLV 
Sbjct: 120 PPESSSSNKMFSDGLAPAVLDSDCALSLLSSPANSSSVDVGRMVVHQPAEHIPMAQPLVP 179

Query: 442 XXXXXXXXXXXXXQA----------SSSVSPTGFSCS-GIDDDHEGNILVSDAS----DA 576
                         +          SS+VS  GF+C  G++ +    +LV  +     D 
Sbjct: 180 GGLQQQQQHHPFGGSPAWFACSQAGSSAVSAGGFACPPGVESEQLNTVLVPSSDGGGHDM 239

Query: 577 DLPCHGIFPVGGEGSSDGASQALPF 651
           ++  HGIF VGG+GSSDG S +LPF
Sbjct: 240 NMNYHGIFHVGGDGSSDGTSPSLPF 264


>ref|XP_003578390.1| PREDICTED: squamosa promoter-binding-like protein 18-like isoform 1
           [Brachypodium distachyon]
          Length = 421

 Score =  105 bits (263), Expect = 8e-21
 Identities = 80/233 (34%), Positives = 122/233 (52%), Gaps = 17/233 (7%)
 Frame = +1

Query: 4   TNHQGIQFTSYPPLFPSTTTPEGLAWPGIIKTEQDTMFIDQQSSSFISRQHNLPSSFYIN 183
           T+ QG +F S+P   P  +      W G+IK+E  + +   Q  +  +R H   S+   +
Sbjct: 192 TSQQGTRFASFPVPRPEPS------WSGMIKSEDSSPYYTHQVLNNNNRPHFAGSTSTYS 245

Query: 184 FKEGKKFPFLQDSE-IALSHRISLEASGKTIPS---------SQSSSMKMLPDG-INHIL 330
            KEG++FPFL + + ++ S  + +      + S         S S++ KM  DG + H L
Sbjct: 246 -KEGRRFPFLHEGDQMSFSTGVEIPVCQPLLKSVVAPPPPESSSSNNNKMFSDGQLTHAL 304

Query: 331 DSEGALSLLSSPVQTAAINLSQMV-PSDRIP-VGQPLVXXXXXXXXXXXXXXQASSS--- 495
           DS+ ALSLLSSP  ++++++S+MV P++ IP V Q LV              QASS    
Sbjct: 305 DSDCALSLLSSPGNSSSVDVSRMVRPTEHIPPVSQHLVPNLQFASSSWFACSQASSGGGV 364

Query: 496 VSPTGFSCSGIDDDHEGNI-LVSDASDADLPCHGIFPVGGEGSSDGASQALPF 651
            +  GF+   +D        LV +++D ++ CHGIF VG EGSSDG S  LPF
Sbjct: 365 SAAAGFAFPSMDSTQLNTAGLVPNSNDHEMNCHGIFHVGAEGSSDGTSPPLPF 417


>ref|XP_002445815.1| hypothetical protein SORBIDRAFT_07g026220 [Sorghum bicolor]
           gi|241942165|gb|EES15310.1| hypothetical protein
           SORBIDRAFT_07g026220 [Sorghum bicolor]
          Length = 435

 Score =  105 bits (261), Expect = 1e-20
 Identities = 86/244 (35%), Positives = 129/244 (52%), Gaps = 28/244 (11%)
 Frame = +1

Query: 4   TNHQGIQFTSYPPLFPSTTTPEGLAWPGIIKTEQDTMFIDQ--QSSSFISRQHNLPSSFY 177
           T+ QG +F+ + P  P        +WPG+IKTE+   +  Q    SS   +QH + S+  
Sbjct: 195 TSQQGTRFSPFAP--PRLEA----SWPGVIKTEESPYYTHQIPLGSSSNRQQHFVGSTTP 248

Query: 178 INFKEGKKFPFLQDSEIALSHRISLEASG-----KTI----PSSQSSSM-----KMLPDG 315
              KEG++FPFLQ+ EI+ +  + LE        KT+    P S SSS      KM  DG
Sbjct: 249 AYAKEGRRFPFLQEGEISFATGVVLEPPACQPLLKTVAVAPPESSSSSSAGGGNKMFSDG 308

Query: 316 INHILDSEGALSLLSSPVQTAAINLSQMV-PSDRIPVGQPLV-XXXXXXXXXXXXXXQAS 489
           +  +LDSE ALSLLS+P  ++ I++S+MV P++ +P+ QP+V               QAS
Sbjct: 309 LTRVLDSECALSLLSAPANSSGIDVSRMVRPTEHVPMAQPVVSGLQFGSSSWFSPRPQAS 368

Query: 490 SSVSP-TGF-SCSGIDDDHEGNI-LVSDASDADLPCHGIFPV------GGEGSSD-GASQ 639
           + V+  +GF SC  + +  +  +  V    D ++   G+F V      GGEGSSD G S 
Sbjct: 369 TGVTAGSGFPSCPAVVEGEQQQLNTVLSPHDNEVNYGGMFHVGGGSGGGGEGSSDGGTSS 428

Query: 640 ALPF 651
           ++PF
Sbjct: 429 SMPF 432


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