BLASTX nr result

ID: Dioscorea21_contig00023447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023447
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE93292.1| ribulose 1,5-bisphosphate carboxylase/oxygenase l...   170   1e-40
gb|AGB14602.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...   170   1e-40
ref|YP_006073112.1| ribulose bisophosphate carboxylase (chloropl...   170   1e-40
gb|AFA27669.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...   170   1e-40
ref|YP_003540939.1| ribulose-1,5-bisphosphate carboxylase/oxygen...   170   1e-40

>gb|AGE93292.1| ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit
           [Chamaedorea seifrizii]
          Length = 484

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/102 (80%), Positives = 86/102 (84%)
 Frame = +3

Query: 123 MSCKEELMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQXXXXXXXX 302
           MSC+E LMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQ        
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 303 XXXXXXXSSTGTWTTVWTDGLTSLDRYKGRCYHIESVVGEQD 428
                  SSTGTWTTVWTDGLTSLDRYKGRCYHIE+VVGE++
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIETVVGEEN 102


>gb|AGB14602.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Limodorum abortivum]
          Length = 487

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/102 (80%), Positives = 86/102 (84%)
 Frame = +3

Query: 123 MSCKEELMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQXXXXXXXX 302
           MSC+E LMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQ        
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 303 XXXXXXXSSTGTWTTVWTDGLTSLDRYKGRCYHIESVVGEQD 428
                  SSTGTWTTVWTDGLTSLDRYKGRCYHIE+VVGE++
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEAVVGEEN 102


>ref|YP_006073112.1| ribulose bisophosphate carboxylase (chloroplast) [Elaeis
           guineensis] gi|325305716|gb|ADZ10877.1| ribulose
           bisophosphate carboxylase (chloroplast) [Elaeis
           guineensis]
          Length = 484

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/102 (80%), Positives = 86/102 (84%)
 Frame = +3

Query: 123 MSCKEELMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQXXXXXXXX 302
           MSC+E LMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQ        
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 303 XXXXXXXSSTGTWTTVWTDGLTSLDRYKGRCYHIESVVGEQD 428
                  SSTGTWTTVWTDGLTSLDRYKGRCYHIE+VVGE++
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIETVVGEEN 102


>gb|AFA27669.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial [Chamaedorea seifrizii]
          Length = 483

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/102 (80%), Positives = 86/102 (84%)
 Frame = +3

Query: 123 MSCKEELMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQXXXXXXXX 302
           MSC+E LMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQ        
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 303 XXXXXXXSSTGTWTTVWTDGLTSLDRYKGRCYHIESVVGEQD 428
                  SSTGTWTTVWTDGLTSLDRYKGRCYHIE+VVGE++
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIETVVGEEN 102


>ref|YP_003540939.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Phoenix dactylifera] gi|290790924|gb|ADD63179.1|
           ribulose bisphosphate carboxylase large chain
           (chloroplast) [Phoenix dactylifera]
           gi|294620585|gb|ADF28154.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit (chloroplast)
           [Phoenix dactylifera]
          Length = 484

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/102 (80%), Positives = 86/102 (84%)
 Frame = +3

Query: 123 MSCKEELMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQXXXXXXXX 302
           MSC+E LMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQ        
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 303 XXXXXXXSSTGTWTTVWTDGLTSLDRYKGRCYHIESVVGEQD 428
                  SSTGTWTTVWTDGLTSLDRYKGRCYHIE+VVGE++
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIETVVGEEN 102


Top