BLASTX nr result

ID: Dioscorea21_contig00023439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023439
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 3...    61   3e-07
ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 3...    61   3e-07
ref|XP_003618340.1| U-box domain-containing protein [Medicago tr...    57   6e-06
ref|XP_002462331.1| hypothetical protein SORBIDRAFT_02g023920 [S...    57   6e-06
ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 3...    56   8e-06

>ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 518

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/68 (44%), Positives = 36/68 (52%)
 Frame = +2

Query: 2   KHRWKLSFHRXXXXXXXXXXXXXXXXXXXXXXXXHEFLCPISSSLMADPVIIPSGQSFDR 181
           KHRWK SFHR                         EF CPIS SLM+DPV++ SGQ+F+R
Sbjct: 6   KHRWKFSFHRSSTHPPK------------------EFTCPISGSLMSDPVVVASGQTFER 47

Query: 182 ATIQACKD 205
             +Q CKD
Sbjct: 48  LAVQLCKD 55


>ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 525

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/68 (44%), Positives = 36/68 (52%)
 Frame = +2

Query: 2   KHRWKLSFHRXXXXXXXXXXXXXXXXXXXXXXXXHEFLCPISSSLMADPVIIPSGQSFDR 181
           KHRWK SFHR                         EF CPIS SLM+DPV++ SGQ+F+R
Sbjct: 6   KHRWKFSFHRSSSQTSNPDPNQVPK----------EFTCPISGSLMSDPVVVASGQTFER 55

Query: 182 ATIQACKD 205
             +Q CKD
Sbjct: 56  LAVQLCKD 63


>ref|XP_003618340.1| U-box domain-containing protein [Medicago truncatula]
           gi|355493355|gb|AES74558.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 554

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +2

Query: 107 EFLCPISSSLMADPVIIPSGQSFDRATIQACKD 205
           EFLCPIS SLM+DPVI+ SG SFDR ++QACK+
Sbjct: 54  EFLCPISGSLMSDPVIVSSGHSFDRTSVQACKN 86


>ref|XP_002462331.1| hypothetical protein SORBIDRAFT_02g023920 [Sorghum bicolor]
           gi|241925708|gb|EER98852.1| hypothetical protein
           SORBIDRAFT_02g023920 [Sorghum bicolor]
          Length = 566

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
 Frame = +2

Query: 8   RWKLSFHRXXXXXXXXXXXXXXXXXXXXXXXX-------HEFLCPISSSLMADPVIIPSG 166
           RWKL FHR                                EFLCP+S +LMADPVI+PSG
Sbjct: 8   RWKLPFHRTSSASAAPPPPPPGHASPARSEAWAAAEAVPEEFLCPLSGALMADPVILPSG 67

Query: 167 QSFDRATIQACKD 205
           ++F+RA +QAC D
Sbjct: 68  KTFERACLQACAD 80


>ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 38-like [Vitis vinifera]
          Length = 523

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 27/68 (39%), Positives = 37/68 (54%)
 Frame = +2

Query: 2   KHRWKLSFHRXXXXXXXXXXXXXXXXXXXXXXXXHEFLCPISSSLMADPVIIPSGQSFDR 181
           KHRWK+SF                           EF+CPIS SLMADPV++ SGQ+F+R
Sbjct: 6   KHRWKISFRSSSSMPKQSPK---------------EFMCPISGSLMADPVVVASGQTFER 50

Query: 182 ATIQACKD 205
            ++Q C++
Sbjct: 51  ISVQVCRN 58


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