BLASTX nr result
ID: Dioscorea21_contig00023439
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00023439 (822 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 3... 61 3e-07 ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 3... 61 3e-07 ref|XP_003618340.1| U-box domain-containing protein [Medicago tr... 57 6e-06 ref|XP_002462331.1| hypothetical protein SORBIDRAFT_02g023920 [S... 57 6e-06 ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 3... 56 8e-06 >ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max] Length = 518 Score = 60.8 bits (146), Expect = 3e-07 Identities = 30/68 (44%), Positives = 36/68 (52%) Frame = +2 Query: 2 KHRWKLSFHRXXXXXXXXXXXXXXXXXXXXXXXXHEFLCPISSSLMADPVIIPSGQSFDR 181 KHRWK SFHR EF CPIS SLM+DPV++ SGQ+F+R Sbjct: 6 KHRWKFSFHRSSTHPPK------------------EFTCPISGSLMSDPVVVASGQTFER 47 Query: 182 ATIQACKD 205 +Q CKD Sbjct: 48 LAVQLCKD 55 >ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max] Length = 525 Score = 60.8 bits (146), Expect = 3e-07 Identities = 30/68 (44%), Positives = 36/68 (52%) Frame = +2 Query: 2 KHRWKLSFHRXXXXXXXXXXXXXXXXXXXXXXXXHEFLCPISSSLMADPVIIPSGQSFDR 181 KHRWK SFHR EF CPIS SLM+DPV++ SGQ+F+R Sbjct: 6 KHRWKFSFHRSSSQTSNPDPNQVPK----------EFTCPISGSLMSDPVVVASGQTFER 55 Query: 182 ATIQACKD 205 +Q CKD Sbjct: 56 LAVQLCKD 63 >ref|XP_003618340.1| U-box domain-containing protein [Medicago truncatula] gi|355493355|gb|AES74558.1| U-box domain-containing protein [Medicago truncatula] Length = 554 Score = 56.6 bits (135), Expect = 6e-06 Identities = 24/33 (72%), Positives = 29/33 (87%) Frame = +2 Query: 107 EFLCPISSSLMADPVIIPSGQSFDRATIQACKD 205 EFLCPIS SLM+DPVI+ SG SFDR ++QACK+ Sbjct: 54 EFLCPISGSLMSDPVIVSSGHSFDRTSVQACKN 86 >ref|XP_002462331.1| hypothetical protein SORBIDRAFT_02g023920 [Sorghum bicolor] gi|241925708|gb|EER98852.1| hypothetical protein SORBIDRAFT_02g023920 [Sorghum bicolor] Length = 566 Score = 56.6 bits (135), Expect = 6e-06 Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 7/73 (9%) Frame = +2 Query: 8 RWKLSFHRXXXXXXXXXXXXXXXXXXXXXXXX-------HEFLCPISSSLMADPVIIPSG 166 RWKL FHR EFLCP+S +LMADPVI+PSG Sbjct: 8 RWKLPFHRTSSASAAPPPPPPGHASPARSEAWAAAEAVPEEFLCPLSGALMADPVILPSG 67 Query: 167 QSFDRATIQACKD 205 ++F+RA +QAC D Sbjct: 68 KTFERACLQACAD 80 >ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 38-like [Vitis vinifera] Length = 523 Score = 56.2 bits (134), Expect = 8e-06 Identities = 27/68 (39%), Positives = 37/68 (54%) Frame = +2 Query: 2 KHRWKLSFHRXXXXXXXXXXXXXXXXXXXXXXXXHEFLCPISSSLMADPVIIPSGQSFDR 181 KHRWK+SF EF+CPIS SLMADPV++ SGQ+F+R Sbjct: 6 KHRWKISFRSSSSMPKQSPK---------------EFMCPISGSLMADPVVVASGQTFER 50 Query: 182 ATIQACKD 205 ++Q C++ Sbjct: 51 ISVQVCRN 58