BLASTX nr result

ID: Dioscorea21_contig00023435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023435
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35812.1| unknown [Lotus japonicus]                               47   1e-08
gb|AFK44366.1| unknown [Lotus japonicus]                               47   5e-08
ref|XP_004140290.1| PREDICTED: two-component response regulator ...    44   6e-08
ref|XP_003606051.1| Two-component response regulator ARR9 [Medic...    45   6e-08
ref|XP_002273990.1| PREDICTED: two-component response regulator ...    44   1e-07

>gb|AFK35812.1| unknown [Lotus japonicus]
          Length = 239

 Score = 47.0 bits (110), Expect(2) = 1e-08
 Identities = 19/31 (61%), Positives = 28/31 (90%)
 Frame = +2

Query: 221 SQTIRCLEDGAEEFMLKPLQQSDVLRLRNHV 313
           S+  RCLE+GAEEF LKP++QSD++RL++H+
Sbjct: 116 SRINRCLEEGAEEFFLKPVRQSDLVRLKSHI 146



 Score = 37.0 bits (84), Expect(2) = 1e-08
 Identities = 16/24 (66%), Positives = 22/24 (91%)
 Frame = +1

Query: 67  MQESPNLKTIPVVIMSSENIPTRI 138
           ++ES +L+ IPVVIMSSEN+P+RI
Sbjct: 95  IKESSSLRNIPVVIMSSENVPSRI 118


>gb|AFK44366.1| unknown [Lotus japonicus]
          Length = 239

 Score = 47.0 bits (110), Expect(2) = 5e-08
 Identities = 19/31 (61%), Positives = 28/31 (90%)
 Frame = +2

Query: 221 SQTIRCLEDGAEEFMLKPLQQSDVLRLRNHV 313
           S+  RCLE+GAEEF LKP++QSD++RL++H+
Sbjct: 116 SRINRCLEEGAEEFFLKPVRQSDLVRLKSHI 146



 Score = 35.0 bits (79), Expect(2) = 5e-08
 Identities = 15/24 (62%), Positives = 21/24 (87%)
 Frame = +1

Query: 67  MQESPNLKTIPVVIMSSENIPTRI 138
           ++ES +L+ IPVV MSSEN+P+RI
Sbjct: 95  IKESSSLRNIPVVTMSSENVPSRI 118


>ref|XP_004140290.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
           sativus] gi|449527697|ref|XP_004170846.1| PREDICTED:
           two-component response regulator ARR9-like [Cucumis
           sativus]
          Length = 156

 Score = 43.9 bits (102), Expect(2) = 6e-08
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +2

Query: 221 SQTIRCLEDGAEEFMLKPLQQSDVLRLRNHV 313
           S+  RCLE+GAEEF LKP+Q SDV +LR H+
Sbjct: 118 SRINRCLEEGAEEFFLKPVQLSDVRKLRPHL 148



 Score = 37.7 bits (86), Expect(2) = 6e-08
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = +1

Query: 67  MQESPNLKTIPVVIMSSENIPTRI 138
           ++ES +LK IPVVIMSSEN+P+RI
Sbjct: 97  IKESKSLKDIPVVIMSSENVPSRI 120


>ref|XP_003606051.1| Two-component response regulator ARR9 [Medicago truncatula]
           gi|355507106|gb|AES88248.1| Two-component response
           regulator ARR9 [Medicago truncatula]
          Length = 153

 Score = 45.1 bits (105), Expect(2) = 6e-08
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = +2

Query: 221 SQTIRCLEDGAEEFMLKPLQQSDVLRLRNHV 313
           S+  RCLE+GAEEF LKP+QQSDV +L+ H+
Sbjct: 96  SRINRCLEEGAEEFFLKPVQQSDVNKLKPHL 126



 Score = 36.6 bits (83), Expect(2) = 6e-08
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +1

Query: 73  ESPNLKTIPVVIMSSENIPTRI 138
           ES +LK IPVVIMSSEN+P+RI
Sbjct: 77  ESNSLKDIPVVIMSSENVPSRI 98


>ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
          Length = 218

 Score = 43.9 bits (102), Expect(2) = 1e-07
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +2

Query: 221 SQTIRCLEDGAEEFMLKPLQQSDVLRLRNHV 313
           S+  RCLE+GAEEF LKP+Q SDV RL+ H+
Sbjct: 112 SRITRCLEEGAEEFFLKPVQISDVNRLKPHM 142



 Score = 37.0 bits (84), Expect(2) = 1e-07
 Identities = 16/24 (66%), Positives = 22/24 (91%)
 Frame = +1

Query: 67  MQESPNLKTIPVVIMSSENIPTRI 138
           ++ES +L+ IPVVIMSSEN+P+RI
Sbjct: 91  IKESSSLRNIPVVIMSSENVPSRI 114


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