BLASTX nr result

ID: Dioscorea21_contig00023424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023424
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...   194   8e-48
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...   188   3e-46
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...   187   6e-46
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...   186   2e-45
ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   184   6e-45

>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score =  194 bits (492), Expect = 8e-48
 Identities = 94/140 (67%), Positives = 111/140 (79%)
 Frame = +1

Query: 7    DIVVDGEVKHRRRVGGLGDVYQDKCTDGPSKTVWDENAILKLLDRSNLQSGASESPEGDL 186
            D + D E K R+R GGLGDVYQDKCTDG +K VWDENAI KLLDR+NLQS ++++ EGD 
Sbjct: 1255 DTIADLEQKQRKRSGGLGDVYQDKCTDGGNKIVWDENAISKLLDRTNLQSASTDAAEGDF 1314

Query: 187  ENDMLGSVKSLEWNEDSNEDLVGTDSSPNIVGDVSEHTPEIKEDNVASVTEENEWDRLLR 366
            EN+MLGSVKSLEWN+++ E+  G +S   +V D     PE KEDNV +VTEENEWDRLLR
Sbjct: 1315 ENEMLGSVKSLEWNDETTEEQGGAESLV-VVDDTCGQNPERKEDNVVNVTEENEWDRLLR 1373

Query: 367  VRWEKYQTEEEATLGRGKRL 426
            +RWEKYQ EEEA LGRGKRL
Sbjct: 1374 LRWEKYQNEEEAALGRGKRL 1393


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/139 (64%), Positives = 107/139 (76%)
 Frame = +1

Query: 7    DIVVDGEVKHRRRVGGLGDVYQDKCTDGPSKTVWDENAILKLLDRSNLQSGASESPEGDL 186
            + V D E KHR+R GGLGDVY+DKCTD  SK +WDENAILKLLDRSNLQ G++++ EGD 
Sbjct: 1250 EAVADIEHKHRKRTGGLGDVYKDKCTDSSSKILWDENAILKLLDRSNLQDGSTDNAEGDS 1309

Query: 187  ENDMLGSVKSLEWNEDSNEDLVGTDSSPNIVGDVSEHTPEIKEDNVASVTEENEWDRLLR 366
            ENDMLGSVK+LEWN++  E+ V  +S P+   DV     E KEDN  +  EENEWD+LLR
Sbjct: 1310 ENDMLGSVKALEWNDEPTEEHVVGESPPHGTDDVCTQNSEKKEDNAVNGNEENEWDKLLR 1369

Query: 367  VRWEKYQTEEEATLGRGKR 423
             RWEKYQ+EEEA LGRGKR
Sbjct: 1370 ARWEKYQSEEEAALGRGKR 1388


>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840937|gb|EEE78484.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2327

 Score =  187 bits (476), Expect = 6e-46
 Identities = 95/141 (67%), Positives = 110/141 (78%), Gaps = 1/141 (0%)
 Frame = +1

Query: 7    DIVVDGEVKHRRRVGGLGDVYQDKCTDGPSKTVWDENAILKLLDRSNLQSGASESPEGDL 186
            D + D E K R+R GGLGDVYQDKCTD  +K VWDENAI KLLDRSNLQ   +++ EGD 
Sbjct: 1254 DAIADLEQKQRKRGGGLGDVYQDKCTDCGNKIVWDENAISKLLDRSNLQFATTDAAEGDF 1313

Query: 187  ENDMLGSVK-SLEWNEDSNEDLVGTDSSPNIVGDVSEHTPEIKEDNVASVTEENEWDRLL 363
            ENDMLGSVK SLEWN+++ E+  G +S P +V D     PE KE+NV +VTEE+EWDRLL
Sbjct: 1314 ENDMLGSVKQSLEWNDETTEEQGGAES-PVVVDDTCGQNPERKEENVINVTEESEWDRLL 1372

Query: 364  RVRWEKYQTEEEATLGRGKRL 426
            RVRWEKYQTEEEA LGRGKRL
Sbjct: 1373 RVRWEKYQTEEEAALGRGKRL 1393


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score =  186 bits (472), Expect = 2e-45
 Identities = 87/139 (62%), Positives = 107/139 (76%)
 Frame = +1

Query: 7    DIVVDGEVKHRRRVGGLGDVYQDKCTDGPSKTVWDENAILKLLDRSNLQSGASESPEGDL 186
            + V+D E K R+R GGLGDVY+DKCTDG +  VWDENAI KLLDRSNLQ+G ++  E D 
Sbjct: 1177 EAVIDIEQKQRKRGGGLGDVYKDKCTDGGNTIVWDENAIAKLLDRSNLQAGTADVAEVDF 1236

Query: 187  ENDMLGSVKSLEWNEDSNEDLVGTDSSPNIVGDVSEHTPEIKEDNVASVTEENEWDRLLR 366
            ENDMLGSVKSLEWN+++ E+ VG +S P +  ++     + KEDNV ++ EENEWDRLLR
Sbjct: 1237 ENDMLGSVKSLEWNDETTEEQVGAESPPVVADEICGQNSDRKEDNVVTIAEENEWDRLLR 1296

Query: 367  VRWEKYQTEEEATLGRGKR 423
             RWEKY+ EEEA LGRGKR
Sbjct: 1297 SRWEKYRNEEEAALGRGKR 1315


>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/139 (64%), Positives = 108/139 (77%)
 Frame = +1

Query: 7    DIVVDGEVKHRRRVGGLGDVYQDKCTDGPSKTVWDENAILKLLDRSNLQSGASESPEGDL 186
            D++ D E K +R+ GGLGDVY+DKCTDG +K VWDENAI+KLLDR+NLQS  S   E DL
Sbjct: 1264 DVIPDVEHKSKRKAGGLGDVYKDKCTDGSTKIVWDENAIMKLLDRTNLQS--SSPAEADL 1321

Query: 187  ENDMLGSVKSLEWNEDSNEDLVGTDSSPNIVGDVSEHTPEIKEDNVASVTEENEWDRLLR 366
            ENDMLGSVKSLEWN++  ++  GT+  P +  DVS    E KEDN+   TEENEWD+LLR
Sbjct: 1322 ENDMLGSVKSLEWNDEPTDEQGGTELPPVVTDDVSAQNSERKEDNLVG-TEENEWDKLLR 1380

Query: 367  VRWEKYQTEEEATLGRGKR 423
            +RWEKYQ+EEEA LGRGKR
Sbjct: 1381 IRWEKYQSEEEAALGRGKR 1399


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