BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023409
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thali...   112   3e-23
ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like...   111   7e-23
gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]          108   5e-22
ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...   108   5e-22
ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
           gi|18410226|ref|NP_567016.1| putative splicing factor
           [Arabidopsis thaliana] gi|7019653|emb|CAB75754.1|
           spliceosomal-like protein [Arabidopsis thaliana]
           gi|7019655|emb|CAB75756.1| spliceosomal-like protein
           [Arabidopsis thaliana] gi|332645831|gb|AEE79352.1|
           splicing factor 3B subunit 3 [Arabidopsis thaliana]
           gi|332645833|gb|AEE79354.1| putative splicing factor
           [Arabidopsis thaliana]
          Length = 1214

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/66 (80%), Positives = 61/66 (92%)
 Frame = -2

Query: 200 GSLIDLLRPDDAGKIQTIHSVEVLGVVRSLAQFRLTGSQKDYIVVGSDSGRIVILEYSKD 21
           G ++DLLRPD+ GKIQTIHSVEV G +RSLAQFRLTG+QKDYIVVGSDSGRIVILEY+K+
Sbjct: 35  GKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKE 94

Query: 20  RNCFDK 3
           +N FDK
Sbjct: 95  KNVFDK 100


>ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
           gi|449513493|ref|XP_004164340.1| PREDICTED: splicing
           factor 3B subunit 3-like [Cucumis sativus]
          Length = 1214

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/66 (78%), Positives = 61/66 (92%)
 Frame = -2

Query: 200 GSLIDLLRPDDAGKIQTIHSVEVLGVVRSLAQFRLTGSQKDYIVVGSDSGRIVILEYSKD 21
           G ++DL+RPDD+GKIQT+ SVE+ G +RSLAQFRLTGSQKDYIVVGSDSGRIVILEY+KD
Sbjct: 35  GKVLDLIRPDDSGKIQTLLSVEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKD 94

Query: 20  RNCFDK 3
           +N FDK
Sbjct: 95  KNVFDK 100


>gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
          Length = 1212

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = -2

Query: 200 GSLIDLLRPDDAGKIQTIHSVEVLGVVRSLAQFRLTGSQKDYIVVGSDSGRIVILEYSKD 21
           G ++DLLRPD+ GKIQTI SVE+ G +RSLAQFRLTGSQKDYIVVGSDSGRIVILEY+K+
Sbjct: 35  GKVLDLLRPDENGKIQTILSVEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKE 94

Query: 20  RNCFDK 3
           +N FDK
Sbjct: 95  KNVFDK 100


>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = -2

Query: 200 GSLIDLLRPDDAGKIQTIHSVEVLGVVRSLAQFRLTGSQKDYIVVGSDSGRIVILEYSKD 21
           G ++DLLRPD+ GKIQTI SVE+ G +RSLAQFRLTGSQKDYIVVGSDSGRIVILEY+K+
Sbjct: 35  GKVLDLLRPDENGKIQTILSVEIFGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKE 94

Query: 20  RNCFDK 3
           +N FDK
Sbjct: 95  KNVFDK 100


>ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|222851883|gb|EEE89430.1|
           predicted protein [Populus trichocarpa]
          Length = 1213

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/66 (75%), Positives = 60/66 (90%)
 Frame = -2

Query: 200 GSLIDLLRPDDAGKIQTIHSVEVLGVVRSLAQFRLTGSQKDYIVVGSDSGRIVILEYSKD 21
           G ++DLLRPD+ GK+QT+ SVE+ G +RSLAQFRLTG+QKDYIVVGSDSGRIVILEY+K+
Sbjct: 35  GKVLDLLRPDENGKLQTVLSVEIFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKE 94

Query: 20  RNCFDK 3
           RN FDK
Sbjct: 95  RNVFDK 100