BLASTX nr result

ID: Dioscorea21_contig00023403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023403
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]          125   4e-27
ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2...   123   2e-26
ref|XP_002326736.1| multidrug/pheromone exporter, MDR family, AB...   120   1e-25
ref|XP_002326737.1| multidrug/pheromone exporter, MDR family, AB...   120   2e-25
dbj|BAD07905.1| putative MDR-like ABC transporter [Oryza sativa ...   119   2e-25

>gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]
          Length = 1249

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/88 (68%), Positives = 72/88 (81%)
 Frame = -3

Query: 265  TEMVSDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFRDLDLRVNSGKTMALVGMSGSGKS 86
            T++V D G +   V G +ELKGV F YPSRPD VIF+D DL+V SGK+MALVG SGSGKS
Sbjct: 987  TQVVGDAGEELTNVEGTIELKGVHFSYPSRPDVVIFKDFDLKVRSGKSMALVGQSGSGKS 1046

Query: 85   TVLALILRFYDPTDGKVMIDGKDIRKFQ 2
            +VLALILRFYDPT GKVMIDG+D++K +
Sbjct: 1047 SVLALILRFYDPTSGKVMIDGRDVKKLK 1074



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/81 (53%), Positives = 57/81 (70%)
 Frame = -3

Query: 253 SDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFRDLDLRVNSGKTMALVGMSGSGKSTVLA 74
           S  G    +V G +ELK V F YPSRPD VIF    L + +GK +ALVG SGSGKSTV++
Sbjct: 356 SKTGRKLSKVEGNIELKNVSFSYPSRPDVVIFDRFCLNIPTGKIVALVGGSGSGKSTVIS 415

Query: 73  LILRFYDPTDGKVMIDGKDIR 11
           LI RFY+P  G++++DG +I+
Sbjct: 416 LIERFYEPLAGEILLDGNNIK 436


>ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2 [Vitis vinifera]
            gi|297742073|emb|CBI33860.3| unnamed protein product
            [Vitis vinifera]
          Length = 1243

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/88 (67%), Positives = 73/88 (82%)
 Frame = -3

Query: 265  TEMVSDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFRDLDLRVNSGKTMALVGMSGSGKS 86
            TE++ D G +  RV G ++LKG++F YPSRPD VIF+D DLRV +GK+MALVG SGSGKS
Sbjct: 982  TEVMGDAGEELTRVEGTIDLKGIEFRYPSRPDVVIFKDFDLRVRAGKSMALVGQSGSGKS 1041

Query: 85   TVLALILRFYDPTDGKVMIDGKDIRKFQ 2
            +VL+LILRFYDP  GKVMIDGKDI+K +
Sbjct: 1042 SVLSLILRFYDPIAGKVMIDGKDIKKLK 1069



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/82 (48%), Positives = 57/82 (69%)
 Frame = -3

Query: 253 SDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFRDLDLRVNSGKTMALVGMSGSGKSTVLA 74
           S  G    ++ G ++ + + F YPSRPD +IF  L   + SGK +ALVG SGSGKSTV++
Sbjct: 351 SKTGRQLHKLEGHIQFRDISFSYPSRPDILIFNKLCFDIPSGKIVALVGGSGSGKSTVIS 410

Query: 73  LILRFYDPTDGKVMIDGKDIRK 8
           LI RFY+P  G++++DG DIR+
Sbjct: 411 LIERFYEPLAGEILLDGNDIRQ 432


>ref|XP_002326736.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222834058|gb|EEE72535.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1230

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/88 (65%), Positives = 71/88 (80%)
 Frame = -3

Query: 265  TEMVSDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFRDLDLRVNSGKTMALVGMSGSGKS 86
            T+++ D G +   V G +EL+GV+F YPSRPD +IF+D D RV SGK+MALVG SGSGKS
Sbjct: 972  TQVIGDAGEELKNVEGTIELRGVQFSYPSRPDTLIFKDFDFRVCSGKSMALVGQSGSGKS 1031

Query: 85   TVLALILRFYDPTDGKVMIDGKDIRKFQ 2
            +VLALILRFYDPT GKVMIDG DI+K +
Sbjct: 1032 SVLALILRFYDPTAGKVMIDGIDIKKLK 1059



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/81 (56%), Positives = 58/81 (71%)
 Frame = -3

Query: 253 SDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFRDLDLRVNSGKTMALVGMSGSGKSTVLA 74
           S  G   G++ G +E + V FCYPSRPD VIF    L + SGK +ALVG SGSGKSTV++
Sbjct: 342 SKTGQKLGKLEGHIEFRDVCFCYPSRPDVVIFNKFRLDIPSGKIVALVGGSGSGKSTVIS 401

Query: 73  LILRFYDPTDGKVMIDGKDIR 11
           LI RFY+P  GK+++DG DIR
Sbjct: 402 LIERFYEPLSGKILLDGNDIR 422


>ref|XP_002326737.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222834059|gb|EEE72536.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1285

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/88 (67%), Positives = 71/88 (80%)
 Frame = -3

Query: 265  TEMVSDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFRDLDLRVNSGKTMALVGMSGSGKS 86
            T+++ D G +   V G +EL+GV+F YPSRPD +IF D DLRV SGK+MALVG SGSGKS
Sbjct: 1015 TQVMGDVGEELKNVKGTIELRGVQFSYPSRPDTLIFMDFDLRVRSGKSMALVGQSGSGKS 1074

Query: 85   TVLALILRFYDPTDGKVMIDGKDIRKFQ 2
            +VL+LILRFYDPT GKVMIDG DIRK +
Sbjct: 1075 SVLSLILRFYDPTAGKVMIDGIDIRKLK 1102



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/73 (57%), Positives = 53/73 (72%)
 Frame = -3

Query: 229 RVVGIVELKGVKFCYPSRPDDVIFRDLDLRVNSGKTMALVGMSGSGKSTVLALILRFYDP 50
           +V G +E K V F YPSRPD  IF    L + SGK +ALVG SGSGKSTV++LI RFY+P
Sbjct: 382 KVDGHIEFKDVCFGYPSRPDVTIFDKFCLDIPSGKIVALVGGSGSGKSTVISLIERFYEP 441

Query: 49  TDGKVMIDGKDIR 11
             G++++DG DIR
Sbjct: 442 LFGQILLDGNDIR 454


>dbj|BAD07905.1| putative MDR-like ABC transporter [Oryza sativa Japonica Group]
           gi|41053279|dbj|BAD07705.1| putative MDR-like ABC
           transporter [Oryza sativa Japonica Group]
          Length = 653

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/86 (66%), Positives = 73/86 (84%)
 Frame = -3

Query: 265 TEMVSDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFRDLDLRVNSGKTMALVGMSGSGKS 86
           T+++ D G D  RV G++EL+GV+F YP+RP+ V+F+ LDL + +GK+MALVGMSGSGKS
Sbjct: 386 TDVLIDAGNDVKRVEGVIELRGVEFRYPARPEVVVFKGLDLLMKAGKSMALVGMSGSGKS 445

Query: 85  TVLALILRFYDPTDGKVMIDGKDIRK 8
           TVL+LILRFYDP  GKV+IDGKDIRK
Sbjct: 446 TVLSLILRFYDPIAGKVLIDGKDIRK 471


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