BLASTX nr result
ID: Dioscorea21_contig00023392
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00023392 (253 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328776.1| predicted protein [Populus trichocarpa] gi|2... 88 8e-16 gb|AFK48331.1| unknown [Lotus japonicus] 82 3e-14 ref|XP_003592929.1| YTH domain family protein [Medicago truncatu... 79 4e-13 ref|XP_003592928.1| YTH domain family protein [Medicago truncatu... 79 4e-13 ref|XP_003592927.1| YTH domain family protein [Medicago truncatu... 79 4e-13 >ref|XP_002328776.1| predicted protein [Populus trichocarpa] gi|222839074|gb|EEE77425.1| predicted protein [Populus trichocarpa] Length = 350 Score = 87.8 bits (216), Expect = 8e-16 Identities = 44/71 (61%), Positives = 52/71 (73%) Frame = -3 Query: 251 NNDNKVVTFSRDTQEIGLPQGLTMLNIMKAYPLTSSILDDFDFYENREKSLYKAKSSEPV 72 NND VTFSRDTQEIGL +GL MLNI K+Y +S+LDDF+FYENREKSL KS++P Sbjct: 220 NNDGHSVTFSRDTQEIGLEKGLEMLNIFKSYSAKTSMLDDFNFYENREKSLNTKKSNKPA 279 Query: 71 MLRSGVGFNKD 39 LR + N D Sbjct: 280 TLRMEIFENSD 290 >gb|AFK48331.1| unknown [Lotus japonicus] Length = 436 Score = 82.4 bits (202), Expect = 3e-14 Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 7/90 (7%) Frame = -3 Query: 251 NNDNKVVTFSRDTQEIGLPQGLTMLNIMKAYPLTSSILDDFDFYENREKSLYKAKSS--- 81 NNDN+ VTFSRDTQEIGL +GL ML+I K+Y +S+LDDFDFYENREK KS+ Sbjct: 302 NNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFYENREKLFRSQKSTKHT 361 Query: 80 --EPVMLRSG--VGFNKDTYLNNLERSFEK 3 +P + SG +N Y N +E +K Sbjct: 362 SPKPQVYNSGNYHVYNNGNYHNTVEAREKK 391 >ref|XP_003592929.1| YTH domain family protein [Medicago truncatula] gi|355481977|gb|AES63180.1| YTH domain family protein [Medicago truncatula] Length = 512 Score = 79.0 bits (193), Expect = 4e-13 Identities = 41/77 (53%), Positives = 55/77 (71%) Frame = -3 Query: 248 NDNKVVTFSRDTQEIGLPQGLTMLNIMKAYPLTSSILDDFDFYENREKSLYKAKSSEPVM 69 N+NK VTFSRDTQEI L +GL ML I K+YP +S+LDDFDFYENREK L +++ +E Sbjct: 397 NENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFYENREK-LCRSQRTEHTG 455 Query: 68 LRSGVGFNKDTYLNNLE 18 + +N D+Y N ++ Sbjct: 456 WKQ-EAYNNDSYHNTMK 471 >ref|XP_003592928.1| YTH domain family protein [Medicago truncatula] gi|355481976|gb|AES63179.1| YTH domain family protein [Medicago truncatula] Length = 547 Score = 79.0 bits (193), Expect = 4e-13 Identities = 41/77 (53%), Positives = 55/77 (71%) Frame = -3 Query: 248 NDNKVVTFSRDTQEIGLPQGLTMLNIMKAYPLTSSILDDFDFYENREKSLYKAKSSEPVM 69 N+NK VTFSRDTQEI L +GL ML I K+YP +S+LDDFDFYENREK L +++ +E Sbjct: 432 NENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFYENREK-LCRSQRTEHTG 490 Query: 68 LRSGVGFNKDTYLNNLE 18 + +N D+Y N ++ Sbjct: 491 WKQ-EAYNNDSYHNTMK 506 >ref|XP_003592927.1| YTH domain family protein [Medicago truncatula] gi|355481975|gb|AES63178.1| YTH domain family protein [Medicago truncatula] Length = 558 Score = 79.0 bits (193), Expect = 4e-13 Identities = 41/77 (53%), Positives = 55/77 (71%) Frame = -3 Query: 248 NDNKVVTFSRDTQEIGLPQGLTMLNIMKAYPLTSSILDDFDFYENREKSLYKAKSSEPVM 69 N+NK VTFSRDTQEI L +GL ML I K+YP +S+LDDFDFYENREK L +++ +E Sbjct: 443 NENKCVTFSRDTQEITLKEGLEMLKIFKSYPAKTSLLDDFDFYENREK-LCRSQRTEHTG 501 Query: 68 LRSGVGFNKDTYLNNLE 18 + +N D+Y N ++ Sbjct: 502 WKQ-EAYNNDSYHNTMK 517