BLASTX nr result

ID: Dioscorea21_contig00023359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023359
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511939.1| conserved hypothetical protein [Ricinus comm...   114   8e-24
ref|XP_002320168.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
emb|CBI31422.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002273155.1| PREDICTED: UDP-galactose:fucoside alpha-3-ga...   107   1e-21
ref|XP_004138472.1| PREDICTED: UDP-galactose:fucoside alpha-3-ga...   106   2e-21

>ref|XP_002511939.1| conserved hypothetical protein [Ricinus communis]
           gi|223549119|gb|EEF50608.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 356

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/75 (68%), Positives = 62/75 (82%)
 Frame = -3

Query: 225 LGVVFPWIRSTDSLFSSNPRGSLAKWRSYTLSQAAAFVGKNGTVIVCAVSEPYIPFLNNW 46
           LGV  PW    + +FS+  + S+AKWR YTL QAA+FV +NGTVIVCAVS+PY+PFLNNW
Sbjct: 50  LGVFVPWTELPNGIFSATKQSSVAKWRQYTLPQAASFVAQNGTVIVCAVSQPYLPFLNNW 109

Query: 45  LISVSRQKHQDKVLV 1
           LIS++RQKHQDKVLV
Sbjct: 110 LISITRQKHQDKVLV 124


>ref|XP_002320168.1| predicted protein [Populus trichocarpa] gi|222860941|gb|EEE98483.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/75 (70%), Positives = 61/75 (81%)
 Frame = -3

Query: 225 LGVVFPWIRSTDSLFSSNPRGSLAKWRSYTLSQAAAFVGKNGTVIVCAVSEPYIPFLNNW 46
           LGV+ PW   T S+FS+    SLAKW+ YTL QA AFV KN TVIVCAVS+PY+PFL+NW
Sbjct: 47  LGVILPWT-GTPSIFSATKPASLAKWQQYTLPQAVAFVAKNKTVIVCAVSQPYLPFLSNW 105

Query: 45  LISVSRQKHQDKVLV 1
           LIS+SRQKHQDKVLV
Sbjct: 106 LISISRQKHQDKVLV 120


>emb|CBI31422.3| unnamed protein product [Vitis vinifera]
          Length = 1331

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/75 (66%), Positives = 61/75 (81%)
 Frame = -3

Query: 225  LGVVFPWIRSTDSLFSSNPRGSLAKWRSYTLSQAAAFVGKNGTVIVCAVSEPYIPFLNNW 46
            LGVV P +R+ D LF  + + S++KWR YTL +A  F  KNGT+IVCAVS+PY+PFLNNW
Sbjct: 1026 LGVVLPGMRAPDGLFGGS-KVSVSKWREYTLEEAVPFAAKNGTLIVCAVSQPYLPFLNNW 1084

Query: 45   LISVSRQKHQDKVLV 1
            LIS+SRQKHQDKVLV
Sbjct: 1085 LISISRQKHQDKVLV 1099


>ref|XP_002273155.1| PREDICTED: UDP-galactose:fucoside alpha-3-galactosyltransferase
           [Vitis vinifera]
          Length = 360

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/75 (66%), Positives = 61/75 (81%)
 Frame = -3

Query: 225 LGVVFPWIRSTDSLFSSNPRGSLAKWRSYTLSQAAAFVGKNGTVIVCAVSEPYIPFLNNW 46
           LGVV P +R+ D LF  + + S++KWR YTL +A  F  KNGT+IVCAVS+PY+PFLNNW
Sbjct: 55  LGVVLPGMRAPDGLFGGS-KVSVSKWREYTLEEAVPFAAKNGTLIVCAVSQPYLPFLNNW 113

Query: 45  LISVSRQKHQDKVLV 1
           LIS+SRQKHQDKVLV
Sbjct: 114 LISISRQKHQDKVLV 128


>ref|XP_004138472.1| PREDICTED: UDP-galactose:fucoside
           alpha-3-galactosyltransferase-like [Cucumis sativus]
           gi|449495244|ref|XP_004159776.1| PREDICTED:
           UDP-galactose:fucoside
           alpha-3-galactosyltransferase-like [Cucumis sativus]
          Length = 355

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/75 (65%), Positives = 64/75 (85%)
 Frame = -3

Query: 225 LGVVFPWIRSTDSLFSSNPRGSLAKWRSYTLSQAAAFVGKNGTVIVCAVSEPYIPFLNNW 46
           LGV  PW+   +S+FSS+ + S +KWR Y+L++AA+FV +NGTVIVCAVS+PY+PFLNNW
Sbjct: 50  LGVFLPWMNIQESIFSSS-KVSNSKWREYSLAEAASFVARNGTVIVCAVSQPYLPFLNNW 108

Query: 45  LISVSRQKHQDKVLV 1
           LIS+SRQKH +KVLV
Sbjct: 109 LISLSRQKHHEKVLV 123


Top