BLASTX nr result

ID: Dioscorea21_contig00023324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023324
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306794.1| predicted protein [Populus trichocarpa] gi|2...    86   5e-15
ref|XP_003634991.1| PREDICTED: protein TIFY 4B-like [Vitis vinif...    76   4e-12
emb|CBI25038.3| unnamed protein product [Vitis vinifera]               76   4e-12
ref|XP_002517073.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
ref|XP_002520938.1| conserved hypothetical protein [Ricinus comm...    65   7e-09

>ref|XP_002306794.1| predicted protein [Populus trichocarpa] gi|222856243|gb|EEE93790.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 47/102 (46%), Positives = 64/102 (62%)
 Frame = +1

Query: 31  AREIELPECPTSRKASLQRYLEKRKDRCKGKRALGGLCPSMDLMYLSQRFKTNVPNEHSG 210
           ARE  L E  TSRKASLQRY EK+KDR K KR +     S+D+ +LS      + N+H  
Sbjct: 255 AREDNL-EGSTSRKASLQRYFEKKKDRFKNKRKVAVPSASLDV-FLSHLVGDQISNDHWN 312

Query: 211 RSDMSSPNQPRPPSTPGRCSSIENQSQKLHISFDLNDDGSGN 336
            +D  SP+QPRPP TP RC+S++N ++   +  DLN+ G  +
Sbjct: 313 LNDACSPSQPRPPQTPNRCNSVDNVAKNGILKADLNNKGDAD 354


>ref|XP_003634991.1| PREDICTED: protein TIFY 4B-like [Vitis vinifera]
          Length = 111

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = +1

Query: 52  ECPTSRKASLQRYLEKRKDRCKGKRALGGLCPSMDL-MYLSQRFKTNVPNEHSGRSDMSS 228
           E PTSRKAS+QRYLEKRKDR K K+  GG+  S  L +YL+ R    +PN+ S +SD  S
Sbjct: 16  EVPTSRKASVQRYLEKRKDRFKSKKR-GGMPSSAGLDIYLNHRVGDQIPNDQSNQSDACS 74

Query: 229 PNQPRPPSTPGRCSSIENQSQKLHISFDLN 318
            +  R    P  CS +EN ++  ++S DLN
Sbjct: 75  LSHCRAHHIPTPCSLVENMTKHTNLSADLN 104


>emb|CBI25038.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = +1

Query: 52  ECPTSRKASLQRYLEKRKDRCKGKRALGGLCPSMDL-MYLSQRFKTNVPNEHSGRSDMSS 228
           E PTSRKAS+QRYLEKRKDR K K+  GG+  S  L +YL+ R    +PN+ S +SD  S
Sbjct: 246 EVPTSRKASVQRYLEKRKDRFKSKKR-GGMPSSAGLDIYLNHRVGDQIPNDQSNQSDACS 304

Query: 229 PNQPRPPSTPGRCSSIENQSQKLHISFDLN 318
            +  R    P  CS +EN ++  ++S DLN
Sbjct: 305 LSHCRAHHIPTPCSLVENMTKHTNLSADLN 334


>ref|XP_002517073.1| conserved hypothetical protein [Ricinus communis]
           gi|223543708|gb|EEF45236.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 335

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = +1

Query: 52  ECPTSRKASLQRYLEKRKDR--CKGKRALGGLCPSMDLMYLSQRFKTNVPNEHSGRSDMS 225
           E   +RK SLQRYLEK+KDR   KG++ LG    S+D  YL+ + +T++ NE S RS  S
Sbjct: 242 EGQANRKMSLQRYLEKKKDRGRFKGRKNLGPNSSSLDA-YLNHQMRTHISNEQSTRSSTS 300

Query: 226 SPNQPRPPSTPGRCSSIENQSQKLHISFDLNDD 324
           SP QP  P T    +S E+Q +    + DLN+D
Sbjct: 301 SPTQPGVPHTSS--NSAEDQLKTASFAVDLNED 331


>ref|XP_002520938.1| conserved hypothetical protein [Ricinus communis]
           gi|223539775|gb|EEF41355.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 270

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 37/89 (41%), Positives = 52/89 (58%)
 Frame = +1

Query: 61  TSRKASLQRYLEKRKDRCKGKRALGGLCPSMDLMYLSQRFKTNVPNEHSGRSDMSSPNQP 240
           TSRKAS+QRYLEKRKDR K KR +    PS D+ +L+   +    N+    ++     QP
Sbjct: 182 TSRKASVQRYLEKRKDRFKNKRKVA--MPSSDI-HLNHCVRDEFSNDQWNLTEACFATQP 238

Query: 241 RPPSTPGRCSSIENQSQKLHISFDLNDDG 327
           RP  TP +CS++    +  ++S DLN  G
Sbjct: 239 RPSQTPIQCSTVAYTEKHTNLSADLNGKG 267


Top