BLASTX nr result
ID: Dioscorea21_contig00023307
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00023307 (221 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268033.1| PREDICTED: polyadenylate-binding protein-int... 104 9e-21 ref|XP_002322645.1| predicted protein [Populus trichocarpa] gi|2... 97 1e-18 ref|XP_002307999.1| predicted protein [Populus trichocarpa] gi|2... 97 1e-18 gb|ABK93250.1| unknown [Populus trichocarpa] 97 1e-18 ref|XP_002276510.1| PREDICTED: polyadenylate-binding protein-int... 96 4e-18 >ref|XP_002268033.1| PREDICTED: polyadenylate-binding protein-interacting protein 2 [Vitis vinifera] gi|296081303|emb|CBI17747.3| unnamed protein product [Vitis vinifera] Length = 172 Score = 104 bits (259), Expect = 9e-21 Identities = 46/59 (77%), Positives = 52/59 (88%) Frame = +2 Query: 44 MTVANGGLRSTLNPNAPLFIPAALRQVEDFSPEWWNLVKTSTWFREHWISQHQDQGNFD 220 M + +GG RSTLNPNAPLFIPAA RQVEDFSPEWW LVKTSTWFR++W+SQHQD NF+ Sbjct: 1 MALVSGG-RSTLNPNAPLFIPAAFRQVEDFSPEWWKLVKTSTWFRDYWLSQHQDDENFE 58 >ref|XP_002322645.1| predicted protein [Populus trichocarpa] gi|222867275|gb|EEF04406.1| predicted protein [Populus trichocarpa] Length = 157 Score = 97.1 bits (240), Expect = 1e-18 Identities = 41/61 (67%), Positives = 51/61 (83%) Frame = +2 Query: 35 MSAMTVANGGLRSTLNPNAPLFIPAALRQVEDFSPEWWNLVKTSTWFREHWISQHQDQGN 214 + M + +GG RSTLNP+APLF+PAA RQVEDFSPEWW LV T+TWFR++W+SQHQD+ Sbjct: 22 LKRMALVSGG-RSTLNPDAPLFVPAAYRQVEDFSPEWWQLVTTTTWFRDYWLSQHQDENG 80 Query: 215 F 217 F Sbjct: 81 F 81 >ref|XP_002307999.1| predicted protein [Populus trichocarpa] gi|222853975|gb|EEE91522.1| predicted protein [Populus trichocarpa] Length = 143 Score = 97.1 bits (240), Expect = 1e-18 Identities = 41/61 (67%), Positives = 51/61 (83%) Frame = +2 Query: 35 MSAMTVANGGLRSTLNPNAPLFIPAALRQVEDFSPEWWNLVKTSTWFREHWISQHQDQGN 214 + M + +GG RSTLNP+APLF+PAA RQVEDFSPEWW LV T+TWFR++W+SQHQD+ Sbjct: 8 LKRMALVSGG-RSTLNPDAPLFVPAAYRQVEDFSPEWWQLVTTTTWFRDYWLSQHQDENG 66 Query: 215 F 217 F Sbjct: 67 F 67 >gb|ABK93250.1| unknown [Populus trichocarpa] Length = 143 Score = 97.1 bits (240), Expect = 1e-18 Identities = 41/61 (67%), Positives = 51/61 (83%) Frame = +2 Query: 35 MSAMTVANGGLRSTLNPNAPLFIPAALRQVEDFSPEWWNLVKTSTWFREHWISQHQDQGN 214 + M + +GG RSTLNP+APLF+PAA RQVEDFSPEWW LV T+TWFR++W+SQHQD+ Sbjct: 8 LKRMALVSGG-RSTLNPDAPLFVPAAYRQVEDFSPEWWQLVTTTTWFRDYWLSQHQDENG 66 Query: 215 F 217 F Sbjct: 67 F 67 >ref|XP_002276510.1| PREDICTED: polyadenylate-binding protein-interacting protein 2 [Vitis vinifera] gi|147782754|emb|CAN70573.1| hypothetical protein VITISV_027129 [Vitis vinifera] Length = 169 Score = 95.5 bits (236), Expect = 4e-18 Identities = 42/59 (71%), Positives = 49/59 (83%) Frame = +2 Query: 44 MTVANGGLRSTLNPNAPLFIPAALRQVEDFSPEWWNLVKTSTWFREHWISQHQDQGNFD 220 M + GG RSTLNPNAPLFIPAA RQVEDFSPEWW L+ TSTWFR++W+SQHQ+ F+ Sbjct: 1 MALVTGG-RSTLNPNAPLFIPAAFRQVEDFSPEWWQLITTSTWFRDYWLSQHQEGDIFN 58