BLASTX nr result

ID: Dioscorea21_contig00023307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023307
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268033.1| PREDICTED: polyadenylate-binding protein-int...   104   9e-21
ref|XP_002322645.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002307999.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
gb|ABK93250.1| unknown [Populus trichocarpa]                           97   1e-18
ref|XP_002276510.1| PREDICTED: polyadenylate-binding protein-int...    96   4e-18

>ref|XP_002268033.1| PREDICTED: polyadenylate-binding protein-interacting protein 2
           [Vitis vinifera] gi|296081303|emb|CBI17747.3| unnamed
           protein product [Vitis vinifera]
          Length = 172

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/59 (77%), Positives = 52/59 (88%)
 Frame = +2

Query: 44  MTVANGGLRSTLNPNAPLFIPAALRQVEDFSPEWWNLVKTSTWFREHWISQHQDQGNFD 220
           M + +GG RSTLNPNAPLFIPAA RQVEDFSPEWW LVKTSTWFR++W+SQHQD  NF+
Sbjct: 1   MALVSGG-RSTLNPNAPLFIPAAFRQVEDFSPEWWKLVKTSTWFRDYWLSQHQDDENFE 58


>ref|XP_002322645.1| predicted protein [Populus trichocarpa] gi|222867275|gb|EEF04406.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 41/61 (67%), Positives = 51/61 (83%)
 Frame = +2

Query: 35  MSAMTVANGGLRSTLNPNAPLFIPAALRQVEDFSPEWWNLVKTSTWFREHWISQHQDQGN 214
           +  M + +GG RSTLNP+APLF+PAA RQVEDFSPEWW LV T+TWFR++W+SQHQD+  
Sbjct: 22  LKRMALVSGG-RSTLNPDAPLFVPAAYRQVEDFSPEWWQLVTTTTWFRDYWLSQHQDENG 80

Query: 215 F 217
           F
Sbjct: 81  F 81


>ref|XP_002307999.1| predicted protein [Populus trichocarpa] gi|222853975|gb|EEE91522.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 41/61 (67%), Positives = 51/61 (83%)
 Frame = +2

Query: 35  MSAMTVANGGLRSTLNPNAPLFIPAALRQVEDFSPEWWNLVKTSTWFREHWISQHQDQGN 214
           +  M + +GG RSTLNP+APLF+PAA RQVEDFSPEWW LV T+TWFR++W+SQHQD+  
Sbjct: 8   LKRMALVSGG-RSTLNPDAPLFVPAAYRQVEDFSPEWWQLVTTTTWFRDYWLSQHQDENG 66

Query: 215 F 217
           F
Sbjct: 67  F 67


>gb|ABK93250.1| unknown [Populus trichocarpa]
          Length = 143

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 41/61 (67%), Positives = 51/61 (83%)
 Frame = +2

Query: 35  MSAMTVANGGLRSTLNPNAPLFIPAALRQVEDFSPEWWNLVKTSTWFREHWISQHQDQGN 214
           +  M + +GG RSTLNP+APLF+PAA RQVEDFSPEWW LV T+TWFR++W+SQHQD+  
Sbjct: 8   LKRMALVSGG-RSTLNPDAPLFVPAAYRQVEDFSPEWWQLVTTTTWFRDYWLSQHQDENG 66

Query: 215 F 217
           F
Sbjct: 67  F 67


>ref|XP_002276510.1| PREDICTED: polyadenylate-binding protein-interacting protein 2
           [Vitis vinifera] gi|147782754|emb|CAN70573.1|
           hypothetical protein VITISV_027129 [Vitis vinifera]
          Length = 169

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 42/59 (71%), Positives = 49/59 (83%)
 Frame = +2

Query: 44  MTVANGGLRSTLNPNAPLFIPAALRQVEDFSPEWWNLVKTSTWFREHWISQHQDQGNFD 220
           M +  GG RSTLNPNAPLFIPAA RQVEDFSPEWW L+ TSTWFR++W+SQHQ+   F+
Sbjct: 1   MALVTGG-RSTLNPNAPLFIPAAFRQVEDFSPEWWQLITTSTWFRDYWLSQHQEGDIFN 58


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