BLASTX nr result

ID: Dioscorea21_contig00023298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023298
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi...   156   9e-36
ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containi...   147   6e-33
ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250...   144   4e-32
emb|CBI36868.3| unnamed protein product [Vitis vinifera]              144   4e-32
ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|2...   143   6e-32

>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  156 bits (394), Expect = 9e-36
 Identities = 69/159 (43%), Positives = 108/159 (67%)
 Frame = +2

Query: 2   EGVRYFEMMSSRFGIKPSFAHHWCLVDLYVRIGRPLEAMRIIQGMPLDNLSSVWGAVISL 181
           EG  +F  M+S +G+KP+  HH C+VDLY R G   +A  +I+ MP    S++WGA+++ 
Sbjct: 387 EGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNA 446

Query: 182 ARIHGDISVGEYLGKKLIDLEPDNYRRYVPLANLYVAASQWDKYRELMQLMKVRQLKKLP 361
            RIHGD  +GE +GK+L++L+P++  RYV L+N+Y A  +WD+  EL ++M+ RQ+ K P
Sbjct: 447 CRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTP 506

Query: 362 ECTLIDLNTVVHKFSVGDESQPEIANIYEVLEEIAKQLK 478
            C+ IDL   +H+F  GD S P++  IY  L E++++LK
Sbjct: 507 GCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELK 545


>ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Glycine max]
          Length = 1116

 Score =  147 bits (370), Expect = 6e-33
 Identities = 66/159 (41%), Positives = 105/159 (66%)
 Frame = +2

Query: 2   EGVRYFEMMSSRFGIKPSFAHHWCLVDLYVRIGRPLEAMRIIQGMPLDNLSSVWGAVISL 181
           EG  YF+ M + +G+ P   H+ C+VDLY R GR  +A  +++ MP++    +WGA+++ 
Sbjct: 315 EGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNG 374

Query: 182 ARIHGDISVGEYLGKKLIDLEPDNYRRYVPLANLYVAASQWDKYRELMQLMKVRQLKKLP 361
           ARIHGD+   E    KL++L+P N   YV L+N+Y    +W + R L  LM+VR +KKLP
Sbjct: 375 ARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLP 434

Query: 362 ECTLIDLNTVVHKFSVGDESQPEIANIYEVLEEIAKQLK 478
            C+L++++ V+ +F  GD S PE+ N+Y +L+EI K+L+
Sbjct: 435 GCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLE 473


>ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  144 bits (363), Expect = 4e-32
 Identities = 70/164 (42%), Positives = 106/164 (64%)
 Frame = +2

Query: 2   EGVRYFEMMSSRFGIKPSFAHHWCLVDLYVRIGRPLEAMRIIQGMPLDNLSSVWGAVISL 181
           EG  Y   M+  + I P+  H+ C+VDLY R GR  EA  +++ MP++    VWGA++S 
Sbjct: 319 EGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 378

Query: 182 ARIHGDISVGEYLGKKLIDLEPDNYRRYVPLANLYVAASQWDKYRELMQLMKVRQLKKLP 361
           +R+HGDI   E   KKLI+LEP N   YV L+N+Y    +W+  R +  LM+   +KK+P
Sbjct: 379 SRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVP 438

Query: 362 ECTLIDLNTVVHKFSVGDESQPEIANIYEVLEEIAKQLKLQPHV 493
            C+LI++  V+H+F VGD+S PE   I+ +LEEI ++LK++ +V
Sbjct: 439 GCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYV 482


>emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  144 bits (363), Expect = 4e-32
 Identities = 70/164 (42%), Positives = 106/164 (64%)
 Frame = +2

Query: 2   EGVRYFEMMSSRFGIKPSFAHHWCLVDLYVRIGRPLEAMRIIQGMPLDNLSSVWGAVISL 181
           EG  Y   M+  + I P+  H+ C+VDLY R GR  EA  +++ MP++    VWGA++S 
Sbjct: 288 EGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 347

Query: 182 ARIHGDISVGEYLGKKLIDLEPDNYRRYVPLANLYVAASQWDKYRELMQLMKVRQLKKLP 361
           +R+HGDI   E   KKLI+LEP N   YV L+N+Y    +W+  R +  LM+   +KK+P
Sbjct: 348 SRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVP 407

Query: 362 ECTLIDLNTVVHKFSVGDESQPEIANIYEVLEEIAKQLKLQPHV 493
            C+LI++  V+H+F VGD+S PE   I+ +LEEI ++LK++ +V
Sbjct: 408 GCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYV 451


>ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|222836077|gb|EEE74498.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  143 bits (361), Expect = 6e-32
 Identities = 68/160 (42%), Positives = 103/160 (64%)
 Frame = +2

Query: 2   EGVRYFEMMSSRFGIKPSFAHHWCLVDLYVRIGRPLEAMRIIQGMPLDNLSSVWGAVISL 181
           EG ++F  M++R GI+P+ AH+ C+VDL  + G   EA  II+ MP+   S VWGA++  
Sbjct: 382 EGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGA 441

Query: 182 ARIHGDISVGEYLGKKLIDLEPDNYRRYVPLANLYVAASQWDKYRELMQLMKVRQLKKLP 361
            RIH D  + E   +++++LEP+N   YV   N+Y A ++WDK REL Q+M  R +KK P
Sbjct: 442 CRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTP 501

Query: 362 ECTLIDLNTVVHKFSVGDESQPEIANIYEVLEEIAKQLKL 481
            C+LI++N +VH+F  GD+S P+   IY  L ++   LK+
Sbjct: 502 GCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKI 541


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