BLASTX nr result
ID: Dioscorea21_contig00023297
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00023297 (778 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23877.3| unnamed protein product [Vitis vinifera] 171 1e-40 ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [V... 171 1e-40 ref|XP_002312248.1| predicted protein [Populus trichocarpa] gi|2... 169 5e-40 gb|AFK37698.1| unknown [Lotus japonicus] 168 1e-39 ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatu... 166 7e-39 >emb|CBI23877.3| unnamed protein product [Vitis vinifera] Length = 164 Score = 171 bits (434), Expect = 1e-40 Identities = 90/144 (62%), Positives = 106/144 (73%), Gaps = 1/144 (0%) Frame = +2 Query: 218 FNPLCNNFSTITLP-HKPLLKISRIEARANTRTESAXXXXXXXXXXFNGSASKPRLSVFC 394 F N+ S +++P K IEARAN + +SA FNGS +KPRLSVFC Sbjct: 17 FGTHSNSISFLSMPITNSFTKAMVIEARANAKKDSAKIRNRRLQRKFNGSPTKPRLSVFC 76 Query: 395 SGKQLYAMLVDDQNKKTLFYGSTLQKSIRQDLPCSTIEAAQKVGEELIKACKELNISEIS 574 S KQLYAMLVDDQNK+ LFYGSTLQKSI + PCS IEAA++VGEEL+KAC + I+EIS Sbjct: 77 SAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAIEAAERVGEELVKACIDHQINEIS 136 Query: 575 SYDRNGFAKGERMAAFEIAISQHG 646 SYDRNGFA+GERM AFEIAIS+HG Sbjct: 137 SYDRNGFARGERMQAFEIAISRHG 160 >ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [Vitis vinifera] Length = 177 Score = 171 bits (434), Expect = 1e-40 Identities = 90/144 (62%), Positives = 106/144 (73%), Gaps = 1/144 (0%) Frame = +2 Query: 218 FNPLCNNFSTITLP-HKPLLKISRIEARANTRTESAXXXXXXXXXXFNGSASKPRLSVFC 394 F N+ S +++P K IEARAN + +SA FNGS +KPRLSVFC Sbjct: 30 FGTHSNSISFLSMPITNSFTKAMVIEARANAKKDSAKIRNRRLQRKFNGSPTKPRLSVFC 89 Query: 395 SGKQLYAMLVDDQNKKTLFYGSTLQKSIRQDLPCSTIEAAQKVGEELIKACKELNISEIS 574 S KQLYAMLVDDQNK+ LFYGSTLQKSI + PCS IEAA++VGEEL+KAC + I+EIS Sbjct: 90 SAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAIEAAERVGEELVKACIDHQINEIS 149 Query: 575 SYDRNGFAKGERMAAFEIAISQHG 646 SYDRNGFA+GERM AFEIAIS+HG Sbjct: 150 SYDRNGFARGERMQAFEIAISRHG 173 >ref|XP_002312248.1| predicted protein [Populus trichocarpa] gi|222852068|gb|EEE89615.1| predicted protein [Populus trichocarpa] Length = 165 Score = 169 bits (429), Expect = 5e-40 Identities = 96/149 (64%), Positives = 106/149 (71%), Gaps = 1/149 (0%) Frame = +2 Query: 203 LSCLNFNPL-CNNFSTITLPHKPLLKISRIEARANTRTESAXXXXXXXXXXFNGSASKPR 379 L NF P+ NF T TL K RANTRTESA FNG+ +KPR Sbjct: 22 LKPFNFLPIQTRNFQTKTLVAK---------RRANTRTESAKIRNRRTLKKFNGTRTKPR 72 Query: 380 LSVFCSGKQLYAMLVDDQNKKTLFYGSTLQKSIRQDLPCSTIEAAQKVGEELIKACKELN 559 LSVFCS KQLYAMLVDDQ+KK LFYGSTLQK + DLP STIEAA+ +GEELIKAC +L Sbjct: 73 LSVFCSTKQLYAMLVDDQSKKCLFYGSTLQKPLSGDLPRSTIEAAECLGEELIKACMDLK 132 Query: 560 ISEISSYDRNGFAKGERMAAFEIAISQHG 646 I+EISSYDRNGFA GERM AFEIAIS+HG Sbjct: 133 INEISSYDRNGFAGGERMQAFEIAISRHG 161 >gb|AFK37698.1| unknown [Lotus japonicus] Length = 164 Score = 168 bits (425), Expect = 1e-39 Identities = 85/128 (66%), Positives = 100/128 (78%) Frame = +2 Query: 263 KPLLKISRIEARANTRTESAXXXXXXXXXXFNGSASKPRLSVFCSGKQLYAMLVDDQNKK 442 KPL+ +EARANTRTES FNG+A PRLSVFCS KQLYAMLVDD+NKK Sbjct: 37 KPLV----VEARANTRTESPKIRNRRMQKKFNGTARHPRLSVFCSDKQLYAMLVDDKNKK 92 Query: 443 TLFYGSTLQKSIRQDLPCSTIEAAQKVGEELIKACKELNISEISSYDRNGFAKGERMAAF 622 LFYGSTL KS R++ PCST+EAAQ+VGE L+KAC +L I+EISSYDRNGF +G+R+ AF Sbjct: 93 CLFYGSTLHKSFRENPPCSTVEAAQRVGEALVKACTDLKINEISSYDRNGFGRGQRLDAF 152 Query: 623 EIAISQHG 646 EIAIS +G Sbjct: 153 EIAISSYG 160 >ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatula] gi|355515149|gb|AES96772.1| 50S ribosomal protein L18 [Medicago truncatula] Length = 189 Score = 166 bits (419), Expect = 7e-39 Identities = 86/127 (67%), Positives = 100/127 (78%), Gaps = 1/127 (0%) Frame = +2 Query: 269 LLKISRI-EARANTRTESAXXXXXXXXXXFNGSASKPRLSVFCSGKQLYAMLVDDQNKKT 445 L+K S + +A+AN R ESA FNG+A+ PRLSVFCS KQLYAMLVDDQNKK Sbjct: 36 LIKKSLVTKAKANARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDQNKKC 95 Query: 446 LFYGSTLQKSIRQDLPCSTIEAAQKVGEELIKACKELNISEISSYDRNGFAKGERMAAFE 625 LFYGSTLQK R++ PCSTIEAAQ+VGE L+KAC +LNI+EISSYDRNGF +GER+ AFE Sbjct: 96 LFYGSTLQKLFRENPPCSTIEAAQRVGEALVKACVDLNINEISSYDRNGFGRGERLNAFE 155 Query: 626 IAISQHG 646 IAIS G Sbjct: 156 IAISNFG 162