BLASTX nr result

ID: Dioscorea21_contig00023297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023297
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23877.3| unnamed protein product [Vitis vinifera]              171   1e-40
ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [V...   171   1e-40
ref|XP_002312248.1| predicted protein [Populus trichocarpa] gi|2...   169   5e-40
gb|AFK37698.1| unknown [Lotus japonicus]                              168   1e-39
ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatu...   166   7e-39

>emb|CBI23877.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  171 bits (434), Expect = 1e-40
 Identities = 90/144 (62%), Positives = 106/144 (73%), Gaps = 1/144 (0%)
 Frame = +2

Query: 218 FNPLCNNFSTITLP-HKPLLKISRIEARANTRTESAXXXXXXXXXXFNGSASKPRLSVFC 394
           F    N+ S +++P      K   IEARAN + +SA          FNGS +KPRLSVFC
Sbjct: 17  FGTHSNSISFLSMPITNSFTKAMVIEARANAKKDSAKIRNRRLQRKFNGSPTKPRLSVFC 76

Query: 395 SGKQLYAMLVDDQNKKTLFYGSTLQKSIRQDLPCSTIEAAQKVGEELIKACKELNISEIS 574
           S KQLYAMLVDDQNK+ LFYGSTLQKSI  + PCS IEAA++VGEEL+KAC +  I+EIS
Sbjct: 77  SAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAIEAAERVGEELVKACIDHQINEIS 136

Query: 575 SYDRNGFAKGERMAAFEIAISQHG 646
           SYDRNGFA+GERM AFEIAIS+HG
Sbjct: 137 SYDRNGFARGERMQAFEIAISRHG 160


>ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [Vitis vinifera]
          Length = 177

 Score =  171 bits (434), Expect = 1e-40
 Identities = 90/144 (62%), Positives = 106/144 (73%), Gaps = 1/144 (0%)
 Frame = +2

Query: 218 FNPLCNNFSTITLP-HKPLLKISRIEARANTRTESAXXXXXXXXXXFNGSASKPRLSVFC 394
           F    N+ S +++P      K   IEARAN + +SA          FNGS +KPRLSVFC
Sbjct: 30  FGTHSNSISFLSMPITNSFTKAMVIEARANAKKDSAKIRNRRLQRKFNGSPTKPRLSVFC 89

Query: 395 SGKQLYAMLVDDQNKKTLFYGSTLQKSIRQDLPCSTIEAAQKVGEELIKACKELNISEIS 574
           S KQLYAMLVDDQNK+ LFYGSTLQKSI  + PCS IEAA++VGEEL+KAC +  I+EIS
Sbjct: 90  SAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAIEAAERVGEELVKACIDHQINEIS 149

Query: 575 SYDRNGFAKGERMAAFEIAISQHG 646
           SYDRNGFA+GERM AFEIAIS+HG
Sbjct: 150 SYDRNGFARGERMQAFEIAISRHG 173


>ref|XP_002312248.1| predicted protein [Populus trichocarpa] gi|222852068|gb|EEE89615.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  169 bits (429), Expect = 5e-40
 Identities = 96/149 (64%), Positives = 106/149 (71%), Gaps = 1/149 (0%)
 Frame = +2

Query: 203 LSCLNFNPL-CNNFSTITLPHKPLLKISRIEARANTRTESAXXXXXXXXXXFNGSASKPR 379
           L   NF P+   NF T TL  K          RANTRTESA          FNG+ +KPR
Sbjct: 22  LKPFNFLPIQTRNFQTKTLVAK---------RRANTRTESAKIRNRRTLKKFNGTRTKPR 72

Query: 380 LSVFCSGKQLYAMLVDDQNKKTLFYGSTLQKSIRQDLPCSTIEAAQKVGEELIKACKELN 559
           LSVFCS KQLYAMLVDDQ+KK LFYGSTLQK +  DLP STIEAA+ +GEELIKAC +L 
Sbjct: 73  LSVFCSTKQLYAMLVDDQSKKCLFYGSTLQKPLSGDLPRSTIEAAECLGEELIKACMDLK 132

Query: 560 ISEISSYDRNGFAKGERMAAFEIAISQHG 646
           I+EISSYDRNGFA GERM AFEIAIS+HG
Sbjct: 133 INEISSYDRNGFAGGERMQAFEIAISRHG 161


>gb|AFK37698.1| unknown [Lotus japonicus]
          Length = 164

 Score =  168 bits (425), Expect = 1e-39
 Identities = 85/128 (66%), Positives = 100/128 (78%)
 Frame = +2

Query: 263 KPLLKISRIEARANTRTESAXXXXXXXXXXFNGSASKPRLSVFCSGKQLYAMLVDDQNKK 442
           KPL+    +EARANTRTES           FNG+A  PRLSVFCS KQLYAMLVDD+NKK
Sbjct: 37  KPLV----VEARANTRTESPKIRNRRMQKKFNGTARHPRLSVFCSDKQLYAMLVDDKNKK 92

Query: 443 TLFYGSTLQKSIRQDLPCSTIEAAQKVGEELIKACKELNISEISSYDRNGFAKGERMAAF 622
            LFYGSTL KS R++ PCST+EAAQ+VGE L+KAC +L I+EISSYDRNGF +G+R+ AF
Sbjct: 93  CLFYGSTLHKSFRENPPCSTVEAAQRVGEALVKACTDLKINEISSYDRNGFGRGQRLDAF 152

Query: 623 EIAISQHG 646
           EIAIS +G
Sbjct: 153 EIAISSYG 160


>ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355515149|gb|AES96772.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 189

 Score =  166 bits (419), Expect = 7e-39
 Identities = 86/127 (67%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
 Frame = +2

Query: 269 LLKISRI-EARANTRTESAXXXXXXXXXXFNGSASKPRLSVFCSGKQLYAMLVDDQNKKT 445
           L+K S + +A+AN R ESA          FNG+A+ PRLSVFCS KQLYAMLVDDQNKK 
Sbjct: 36  LIKKSLVTKAKANARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDQNKKC 95

Query: 446 LFYGSTLQKSIRQDLPCSTIEAAQKVGEELIKACKELNISEISSYDRNGFAKGERMAAFE 625
           LFYGSTLQK  R++ PCSTIEAAQ+VGE L+KAC +LNI+EISSYDRNGF +GER+ AFE
Sbjct: 96  LFYGSTLQKLFRENPPCSTIEAAQRVGEALVKACVDLNINEISSYDRNGFGRGERLNAFE 155

Query: 626 IAISQHG 646
           IAIS  G
Sbjct: 156 IAISNFG 162


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