BLASTX nr result

ID: Dioscorea21_contig00023278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023278
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567956.1| PREDICTED: nuclease S1-like [Brachypodium di...   390   e-106
dbj|BAJ95618.1| predicted protein [Hordeum vulgare subsp. vulgare]    389   e-106
ref|NP_001041910.1| Os01g0128200 [Oryza sativa Japonica Group] g...   388   e-105
ref|NP_001148452.1| LOC100282067 precursor [Zea mays] gi|1956193...   387   e-105
gb|ACF84787.1| unknown [Zea mays] gi|194703784|gb|ACF85976.1| un...   387   e-105

>ref|XP_003567956.1| PREDICTED: nuclease S1-like [Brachypodium distachyon]
          Length = 298

 Score =  390 bits (1002), Expect = e-106
 Identities = 175/286 (61%), Positives = 221/286 (77%)
 Frame = +3

Query: 249  LGLSLMITIMVSTPVVEAWGKEGHFMVCKIAEQYLTENTSRIVKELLPESAGGELAEVCS 428
            L L L++  ++      AWGKEGH MVCKIAE+YL+ + +  V+ELLPE+AGGEL+ +C 
Sbjct: 8    LPLLLLLVPLLDAGRAAAWGKEGHIMVCKIAEKYLSASAAAAVQELLPEAAGGELSTMCP 67

Query: 429  WADEVRFRMRWTSPLHYVNTPGVCTFKYSRDCFNSQGVKDMCVVGAINNYTAQLQSYGDS 608
            WAD++RFR  W SPLHY NTP VC FK+SRDC NS+G + MCVVGAINNYT QL SYGD 
Sbjct: 68   WADQMRFRYHWASPLHYANTPNVCNFKFSRDCHNSRGQQGMCVVGAINNYTDQLYSYGDP 127

Query: 609  STAYDLTQSLMFLAHFVGDVHQPLHAGFKDDAGGNTIVVHWYRRKTNLHHVWDVSMIETA 788
             ++Y+LT+SLMFLAHFVGDVHQPLH  F+ D GGNTI+VHWYRRK NLHHVWDVS+I+T 
Sbjct: 128  KSSYNLTESLMFLAHFVGDVHQPLHVAFEKDEGGNTIMVHWYRRKANLHHVWDVSIIDTV 187

Query: 789  MKDYYNNDLNVMIDSILKNIDNEWSDEVNKWETCRRKTSTCATNYATESTSLACEYAYKD 968
            MK++YN  L+ M+D++  N+ N WSD+V+ WE C  K +TCA +YA ES  L+C YAYKD
Sbjct: 188  MKNFYNRSLDTMVDALKGNLTNGWSDDVSHWENCENKRATCANDYAIESIHLSCNYAYKD 247

Query: 969  VEQDSVLTDEYFHSRLPVLEKRIAQGGVRLAAILNGLFDSSFSDSV 1106
            VEQ+  L D+Y+ SR PV+EKR+AQ G+RLA ILN +FD   +D +
Sbjct: 248  VEQNVTLGDDYYFSRYPVVEKRLAQAGIRLALILNRIFDKDKADVI 293


>dbj|BAJ95618.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 306

 Score =  389 bits (1000), Expect = e-106
 Identities = 180/290 (62%), Positives = 226/290 (77%), Gaps = 3/290 (1%)
 Frame = +3

Query: 246  LLGLSLMITIMVSTPV-VEAWGKEGHFMVCKIAEQYLTENTSRIVKELLPESAGGELAEV 422
            LL L L+  +  S P   +AWGKEGH MVCK+AE+YL+E+ +  V+ELLPESAGGEL+ V
Sbjct: 12   LLLLLLVSLLAASAPRRADAWGKEGHIMVCKVAERYLSEDAAAAVQELLPESAGGELSTV 71

Query: 423  CSWADEVRFRMRWTSPLHYVNTPGVCTFKYSRDCFNSQGVKDMCVVGAINNYTAQLQSYG 602
            C WAD +RFR  W SPLHY NTP VC F +SRDC NS+G + MCVVGAINNYT QL +YG
Sbjct: 72   CPWADTMRFRYHWASPLHYANTPNVCNFDFSRDCHNSRGEQGMCVVGAINNYTDQLYTYG 131

Query: 603  DSST--AYDLTQSLMFLAHFVGDVHQPLHAGFKDDAGGNTIVVHWYRRKTNLHHVWDVSM 776
            DSS+  +Y+LT+SLMFLAHFVGDVHQPLH G+++D GGNTI VHWYRRK NLHHVWDVS+
Sbjct: 132  DSSSKSSYNLTESLMFLAHFVGDVHQPLHVGYEEDEGGNTITVHWYRRKANLHHVWDVSI 191

Query: 777  IETAMKDYYNNDLNVMIDSILKNIDNEWSDEVNKWETCRRKTSTCATNYATESTSLACEY 956
            I+T MKD+YN  L+ M+D++  N+   WSD+V +WE+C  K +TCA +YA ES +LAC Y
Sbjct: 192  IDTVMKDFYNKSLDTMVDALQTNLTEGWSDDVGRWESCANKKATCANDYAIESINLACNY 251

Query: 957  AYKDVEQDSVLTDEYFHSRLPVLEKRIAQGGVRLAAILNGLFDSSFSDSV 1106
            AYKDV Q+  L D+Y+ +R PV+EKR+AQ GVRLA ILN +FD   +D++
Sbjct: 252  AYKDVVQNITLGDDYYLTRYPVVEKRLAQAGVRLALILNRIFDKKKADAM 301


>ref|NP_001041910.1| Os01g0128200 [Oryza sativa Japonica Group] gi|9558456|dbj|BAB03377.1|
            putative nuclease I [Oryza sativa Japonica Group]
            gi|53791283|dbj|BAD52548.1| putative nuclease I [Oryza
            sativa Japonica Group] gi|113531441|dbj|BAF03824.1|
            Os01g0128200 [Oryza sativa Japonica Group]
            gi|215765353|dbj|BAG87050.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 308

 Score =  388 bits (997), Expect = e-105
 Identities = 178/288 (61%), Positives = 221/288 (76%), Gaps = 3/288 (1%)
 Frame = +3

Query: 246  LLGLSLMITIMVSTPV---VEAWGKEGHFMVCKIAEQYLTENTSRIVKELLPESAGGELA 416
            LL L+  ++++  T      EAWGK+GH +VCKIAE+YL+E  +  V+ELLPESAGGEL+
Sbjct: 12   LLPLAAFVSVVSLTAAPRRAEAWGKQGHIIVCKIAEKYLSEKAAAAVEELLPESAGGELS 71

Query: 417  EVCSWADEVRFRMRWTSPLHYVNTPGVCTFKYSRDCFNSQGVKDMCVVGAINNYTAQLQS 596
             VC WADEVRF   W+ PLHY NTP VC FKYSRDC NS+  + MCVVGAINNYT QL S
Sbjct: 72   TVCPWADEVRFHYYWSRPLHYANTPQVCNFKYSRDCHNSRHQQGMCVVGAINNYTDQLYS 131

Query: 597  YGDSSTAYDLTQSLMFLAHFVGDVHQPLHAGFKDDAGGNTIVVHWYRRKTNLHHVWDVSM 776
            YGDS ++Y+LT+SLMFLAHFVGDVHQPLH GF++D GGNTI VHWYRRK NLHHVWD S+
Sbjct: 132  YGDSKSSYNLTESLMFLAHFVGDVHQPLHVGFEEDEGGNTIKVHWYRRKENLHHVWDNSI 191

Query: 777  IETAMKDYYNNDLNVMIDSILKNIDNEWSDEVNKWETCRRKTSTCATNYATESTSLACEY 956
            IETAMKD+YN  L+ M++++  N+ + WS++++ WE C  K  TCA +YA ES  L+C Y
Sbjct: 192  IETAMKDFYNRSLDTMVEALKMNLTDGWSEDISHWENCGNKKETCANDYAIESIHLSCNY 251

Query: 957  AYKDVEQDSVLTDEYFHSRLPVLEKRIAQGGVRLAAILNGLFDSSFSD 1100
            AYKDVEQD  L D+YF+SR P++EKR+AQ G+RLA ILN +F     D
Sbjct: 252  AYKDVEQDITLGDDYFYSRYPIVEKRLAQAGIRLALILNRIFGEDKPD 299


>ref|NP_001148452.1| LOC100282067 precursor [Zea mays] gi|195619364|gb|ACG31512.1|
            nuclease PA3 [Zea mays] gi|223943357|gb|ACN25762.1|
            unknown [Zea mays] gi|414585079|tpg|DAA35650.1| TPA:
            nuclease PA3 [Zea mays]
          Length = 291

 Score =  387 bits (995), Expect = e-105
 Identities = 187/285 (65%), Positives = 220/285 (77%)
 Frame = +3

Query: 228  MGFLQFLLGLSLMITIMVSTPVVEAWGKEGHFMVCKIAEQYLTENTSRIVKELLPESAGG 407
            MG L  LL   L++    + P  +AWGKEGH+MVCKIAE +LT+  S  VKELLP  AGG
Sbjct: 1    MGLL--LLLHVLLVAAAATAPAADAWGKEGHYMVCKIAESFLTKEASTAVKELLPGWAGG 58

Query: 408  ELAEVCSWADEVRFRMRWTSPLHYVNTPGVCTFKYSRDCFNSQGVKDMCVVGAINNYTAQ 587
            ELAE CSWAD  RFR RW+SPLH+ +TPG C F Y+RDC N++G K+MCVVGAINNYTA 
Sbjct: 59   ELAETCSWADTQRFRYRWSSPLHFADTPGDCEFDYARDCHNTKGEKNMCVVGAINNYTAA 118

Query: 588  LQSYGDSSTAYDLTQSLMFLAHFVGDVHQPLHAGFKDDAGGNTIVVHWYRRKTNLHHVWD 767
            L+   DSS+ +D T+SLMFLAHFVGDVHQPLH G  DD GGNTIVVHWYRRKTNLHHVWD
Sbjct: 119  LK---DSSSPFDPTESLMFLAHFVGDVHQPLHCGHTDDLGGNTIVVHWYRRKTNLHHVWD 175

Query: 768  VSMIETAMKDYYNNDLNVMIDSILKNIDNEWSDEVNKWETCRRKTSTCATNYATESTSLA 947
            V++IETAMKD+Y ND + MI +I +NI  EW+DE  KWE CR +T TCA  YA ES  LA
Sbjct: 176  VNVIETAMKDFYGNDQSTMIQAIQQNITEEWADEEKKWEACRSRTKTCADKYAAESAKLA 235

Query: 948  CEYAYKDVEQDSVLTDEYFHSRLPVLEKRIAQGGVRLAAILNGLF 1082
            C  AY+ V+QDS L D+YF + LPV++KRIAQGGVRLAAILN +F
Sbjct: 236  CT-AYEGVDQDSTLEDDYFFAALPVVQKRIAQGGVRLAAILNRIF 279


>gb|ACF84787.1| unknown [Zea mays] gi|194703784|gb|ACF85976.1| unknown [Zea mays]
            gi|413947276|gb|AFW79925.1| putative nuclease [Zea mays]
          Length = 301

 Score =  387 bits (995), Expect = e-105
 Identities = 172/282 (60%), Positives = 219/282 (77%)
 Frame = +3

Query: 261  LMITIMVSTPVVEAWGKEGHFMVCKIAEQYLTENTSRIVKELLPESAGGELAEVCSWADE 440
            + + ++++ P+  AWGKEGH MVCKIAE+YL+E  +  V+ LLPESAGGEL+ VC WAD+
Sbjct: 16   VFLLLLLAPPLAGAWGKEGHIMVCKIAEKYLSEKAAAAVQALLPESAGGELSTVCPWADQ 75

Query: 441  VRFRMRWTSPLHYVNTPGVCTFKYSRDCFNSQGVKDMCVVGAINNYTAQLQSYGDSSTAY 620
            VR+   W SPLHY NTP VC FKYSRDC NS+G + MCVVGAINNYT QL SYG   T+Y
Sbjct: 76   VRWHYHWASPLHYANTPQVCNFKYSRDCHNSRGQQGMCVVGAINNYTDQLYSYGQK-TSY 134

Query: 621  DLTQSLMFLAHFVGDVHQPLHAGFKDDAGGNTIVVHWYRRKTNLHHVWDVSMIETAMKDY 800
            +LT+SLMFLAHFVGDVHQPLH GF+DD GGNTI VHWYRRK NLHHVWDVS+I+TA+KD+
Sbjct: 135  NLTESLMFLAHFVGDVHQPLHVGFQDDEGGNTITVHWYRRKANLHHVWDVSIIDTAIKDF 194

Query: 801  YNNDLNVMIDSILKNIDNEWSDEVNKWETCRRKTSTCATNYATESTSLACEYAYKDVEQD 980
            YN  ++ M++++  N+ + WSD++  WE C+ K +TCA +YA ES   +C YAYKDVEQD
Sbjct: 195  YNKSMDTMVEALKMNLTDGWSDDIVHWENCKNKHATCANDYAIESIHYSCNYAYKDVEQD 254

Query: 981  SVLTDEYFHSRLPVLEKRIAQGGVRLAAILNGLFDSSFSDSV 1106
              L D+YF SR P++EKR+AQ G+RLA +LN +F    +D +
Sbjct: 255  ITLGDDYFFSRYPIVEKRLAQAGIRLALVLNRIFGGGEADDI 296


Top