BLASTX nr result

ID: Dioscorea21_contig00023269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023269
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267356.1| PREDICTED: cyclin-D4-1 [Vitis vinifera] gi|2...    69   5e-10
emb|CAN66965.1| hypothetical protein VITISV_043227 [Vitis vinifera]    69   5e-10
gb|AEZ35254.1| cyclin D-type [Persea americana]                        65   7e-09
ref|XP_002298781.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002298782.1| predicted protein [Populus trichocarpa] gi|1...    64   1e-08

>ref|XP_002267356.1| PREDICTED: cyclin-D4-1 [Vitis vinifera]
           gi|296083031|emb|CBI22435.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 6/68 (8%)
 Frame = +2

Query: 2   VRRMELLLMAALHWRMRSVTPFDFLDPLSSLF--SAAYRRPLLSR----SAVLVLQTHRV 163
           ++RMEL +MA L+WR+RSVTPFDF+D  +S    S+A R  LL+R    SA L+L T RV
Sbjct: 170 IQRMELWVMANLNWRLRSVTPFDFIDYFASKLPCSSASRHDLLTRVFSVSADLILNTTRV 229

Query: 164 IDFLGFQP 187
           +DFLGF P
Sbjct: 230 VDFLGFSP 237


>emb|CAN66965.1| hypothetical protein VITISV_043227 [Vitis vinifera]
          Length = 334

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 6/68 (8%)
 Frame = +2

Query: 2   VRRMELLLMAALHWRMRSVTPFDFLDPLSSLF--SAAYRRPLLSR----SAVLVLQTHRV 163
           ++RMEL +MA L+WR+RSVTPFDF+D  +S    S+A R  LL+R    SA L+L T RV
Sbjct: 170 IQRMELWVMANLNWRLRSVTPFDFIDYFASKLPCSSASRHDLLTRVFSVSADLILNTTRV 229

Query: 164 IDFLGFQP 187
           +DFLGF P
Sbjct: 230 VDFLGFSP 237


>gb|AEZ35254.1| cyclin D-type [Persea americana]
          Length = 334

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
 Frame = +2

Query: 2   VRRMELLLMAALHWRMRSVTPFDFLDPLSSLFSAAYRRPLLS-----RSAVLVLQTHRVI 166
           + RME+++MA+L WRMRSVTPFDF+D  +    +   R + S     R + L+L THRVI
Sbjct: 148 IGRMEVMVMASLKWRMRSVTPFDFVDYFAERIESFGARNVSSDRFFCRVSELILSTHRVI 207

Query: 167 DFLGFQPXXXXXXXXXXXXRELA 235
           DFLGF+             RE+A
Sbjct: 208 DFLGFRSSTMAAAAVLCTAREIA 230


>ref|XP_002298781.1| predicted protein [Populus trichocarpa] gi|222846039|gb|EEE83586.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 6/68 (8%)
 Frame = +2

Query: 2   VRRMELLLMAALHWRMRSVTPFDFLDP-LSSLFSAAYRRP-----LLSRSAVLVLQTHRV 163
           +++MEL +MA L+WR+RS TPFD+LD  +S L S +  +P     +L +SA L+L T RV
Sbjct: 214 IQKMELRVMANLNWRLRSTTPFDYLDYFISKLPSCSSTKPENFDRVLKKSADLILNTTRV 273

Query: 164 IDFLGFQP 187
           IDFLGF P
Sbjct: 274 IDFLGFAP 281


>ref|XP_002298782.1| predicted protein [Populus trichocarpa]
           gi|159025703|emb|CAN88852.1| D1-type cyclin [Populus
           trichocarpa] gi|222846040|gb|EEE83587.1| predicted
           protein [Populus trichocarpa]
          Length = 262

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 6/68 (8%)
 Frame = +2

Query: 2   VRRMELLLMAALHWRMRSVTPFDFLDP-LSSLFSAAYRRP-----LLSRSAVLVLQTHRV 163
           +++MEL +MA L+WR+RS TPFD+LD  +S L S +  +P     +L +SA L+L T RV
Sbjct: 76  IQKMELRVMANLNWRLRSTTPFDYLDYFISKLPSCSSTKPENFDRVLKKSADLILNTTRV 135

Query: 164 IDFLGFQP 187
           IDFLGF P
Sbjct: 136 IDFLGFAP 143