BLASTX nr result
ID: Dioscorea21_contig00023269
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00023269 (235 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267356.1| PREDICTED: cyclin-D4-1 [Vitis vinifera] gi|2... 69 5e-10 emb|CAN66965.1| hypothetical protein VITISV_043227 [Vitis vinifera] 69 5e-10 gb|AEZ35254.1| cyclin D-type [Persea americana] 65 7e-09 ref|XP_002298781.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 ref|XP_002298782.1| predicted protein [Populus trichocarpa] gi|1... 64 1e-08 >ref|XP_002267356.1| PREDICTED: cyclin-D4-1 [Vitis vinifera] gi|296083031|emb|CBI22435.3| unnamed protein product [Vitis vinifera] Length = 354 Score = 68.6 bits (166), Expect = 5e-10 Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 6/68 (8%) Frame = +2 Query: 2 VRRMELLLMAALHWRMRSVTPFDFLDPLSSLF--SAAYRRPLLSR----SAVLVLQTHRV 163 ++RMEL +MA L+WR+RSVTPFDF+D +S S+A R LL+R SA L+L T RV Sbjct: 170 IQRMELWVMANLNWRLRSVTPFDFIDYFASKLPCSSASRHDLLTRVFSVSADLILNTTRV 229 Query: 164 IDFLGFQP 187 +DFLGF P Sbjct: 230 VDFLGFSP 237 >emb|CAN66965.1| hypothetical protein VITISV_043227 [Vitis vinifera] Length = 334 Score = 68.6 bits (166), Expect = 5e-10 Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 6/68 (8%) Frame = +2 Query: 2 VRRMELLLMAALHWRMRSVTPFDFLDPLSSLF--SAAYRRPLLSR----SAVLVLQTHRV 163 ++RMEL +MA L+WR+RSVTPFDF+D +S S+A R LL+R SA L+L T RV Sbjct: 170 IQRMELWVMANLNWRLRSVTPFDFIDYFASKLPCSSASRHDLLTRVFSVSADLILNTTRV 229 Query: 164 IDFLGFQP 187 +DFLGF P Sbjct: 230 VDFLGFSP 237 >gb|AEZ35254.1| cyclin D-type [Persea americana] Length = 334 Score = 64.7 bits (156), Expect = 7e-09 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Frame = +2 Query: 2 VRRMELLLMAALHWRMRSVTPFDFLDPLSSLFSAAYRRPLLS-----RSAVLVLQTHRVI 166 + RME+++MA+L WRMRSVTPFDF+D + + R + S R + L+L THRVI Sbjct: 148 IGRMEVMVMASLKWRMRSVTPFDFVDYFAERIESFGARNVSSDRFFCRVSELILSTHRVI 207 Query: 167 DFLGFQPXXXXXXXXXXXXRELA 235 DFLGF+ RE+A Sbjct: 208 DFLGFRSSTMAAAAVLCTAREIA 230 >ref|XP_002298781.1| predicted protein [Populus trichocarpa] gi|222846039|gb|EEE83586.1| predicted protein [Populus trichocarpa] Length = 400 Score = 63.9 bits (154), Expect = 1e-08 Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 6/68 (8%) Frame = +2 Query: 2 VRRMELLLMAALHWRMRSVTPFDFLDP-LSSLFSAAYRRP-----LLSRSAVLVLQTHRV 163 +++MEL +MA L+WR+RS TPFD+LD +S L S + +P +L +SA L+L T RV Sbjct: 214 IQKMELRVMANLNWRLRSTTPFDYLDYFISKLPSCSSTKPENFDRVLKKSADLILNTTRV 273 Query: 164 IDFLGFQP 187 IDFLGF P Sbjct: 274 IDFLGFAP 281 >ref|XP_002298782.1| predicted protein [Populus trichocarpa] gi|159025703|emb|CAN88852.1| D1-type cyclin [Populus trichocarpa] gi|222846040|gb|EEE83587.1| predicted protein [Populus trichocarpa] Length = 262 Score = 63.9 bits (154), Expect = 1e-08 Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 6/68 (8%) Frame = +2 Query: 2 VRRMELLLMAALHWRMRSVTPFDFLDP-LSSLFSAAYRRP-----LLSRSAVLVLQTHRV 163 +++MEL +MA L+WR+RS TPFD+LD +S L S + +P +L +SA L+L T RV Sbjct: 76 IQKMELRVMANLNWRLRSTTPFDYLDYFISKLPSCSSTKPENFDRVLKKSADLILNTTRV 135 Query: 164 IDFLGFQP 187 IDFLGF P Sbjct: 136 IDFLGFAP 143