BLASTX nr result

ID: Dioscorea21_contig00023261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023261
         (1892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   641   0.0  
ref|XP_002438776.1| hypothetical protein SORBIDRAFT_10g026010 [S...   639   e-180
emb|CBI23999.3| unnamed protein product [Vitis vinifera]              634   e-179
gb|AFW76150.1| putative ubiquitin carboxyl-terminal hydrolase su...   631   e-178
dbj|BAD37420.1| putative ubiquitin-specific protease 15 [Oryza s...   630   e-178

>ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
            vinifera]
          Length = 940

 Score =  641 bits (1653), Expect = 0.0
 Identities = 335/603 (55%), Positives = 395/603 (65%), Gaps = 35/603 (5%)
 Frame = -3

Query: 1764 DLPALSRFFFTAVLLFAGAFFILRRAASRYFFVGDD----------------------PA 1651
            DL    +F FT+ ++  G   +++  AS+YF V  +                      P 
Sbjct: 9    DLNWFLQFIFTSFVVALGLLHLVKNTASKYFVVDANFEGGGGGGGGEGGGAGAGDVSVPG 68

Query: 1650 SFVAEETRCSPMAVAGGPCAVCGEPGTKKCSRCKSVLYCSQVCQAKHWGADHKQKCKQIT 1471
               ++ +    ++  G  C VCG  GTKKCS CK+V YCSQ CQA HW + HK KCK   
Sbjct: 69   GGRSDSSIMPGVSGTGDSCLVCGNLGTKKCSGCKAVRYCSQTCQATHWKSGHKTKCKDFQ 128

Query: 1470 SSNDVTLI-SDMHKRKXXXXXXXXXXXS------HGTCKVLPESKKILFPYDEFVKLFDW 1312
             S    L  S  H  +                   GT K+L +SK+ILFPYDEFV+ F+W
Sbjct: 129  LSGKANLADSTTHSGRKASGVGVNNSNGIALVPSSGTSKILKQSKEILFPYDEFVEFFNW 188

Query: 1311 DKPGFPPCGLLNCGNSCFANVVLQCLACTRPLTAYLLEKDHSRGCIRKRDDWCFLCELQI 1132
            DKPGFPPCGL+NCGNSCFANVVLQCLA TRPL AYLLEK H R C  +R+DWCFLCE Q+
Sbjct: 189  DKPGFPPCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQC--RRNDWCFLCEFQV 246

Query: 1131 HIQRASESLHPFSPLNILSRLPNIGGNLGCGRQEDAHEFMRFAIDTMQSICLDEFGGEKA 952
            H++RAS S  PFSP+NILSRLP+IGGNLG G+QEDAHEFMRFAIDTMQS+CLDEFGGEK+
Sbjct: 247  HVERASHSPQPFSPINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEFGGEKS 306

Query: 951  LNMSSQETTLIQHIFGGQLLSQVICTKCNMISNRYENMMDLTVEIQGDAEYLEECLDQFT 772
            ++ SSQETTLIQHIFGG L SQVICTKC+ ISN+YENMMDLTVEI GDA  LEECLDQFT
Sbjct: 307  VHPSSQETTLIQHIFGGHLQSQVICTKCSKISNQYENMMDLTVEIHGDAASLEECLDQFT 366

Query: 771  AEEWLDGDNKYKCDGCNDYVKACKRLTVHRAPNVLTITLKRFQSGRFGKLNKRVAFPENL 592
              EWL G+N YKCDGCNDYVKA KRLTV  APN+LTI LKRFQSGRFGKLNKRV FPE L
Sbjct: 367  VTEWLHGENMYKCDGCNDYVKASKRLTVRHAPNILTIALKRFQSGRFGKLNKRVTFPETL 426

Query: 591  DLTPYMSGNRDGTDVYTLYAVVVHVDMLNASFFGHYICYTKGYCGRWYRIDDCKVMNVDV 412
            DL+PYMS    GTDVY LYAVVVH+DMLNASFFGHY+CYTK + G WYRIDDCKV  V++
Sbjct: 427  DLSPYMSKAVVGTDVYKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCKVTRVEL 486

Query: 411  DEVLSQGAYMLLYRRKNVR------PEPFAKPLEEPMKRNLTELDPMLSSTCNGTDDVHE 250
            D+VLSQGAYMLLY R  VR       EPF K   E M     E++P             +
Sbjct: 487  DDVLSQGAYMLLYSRVCVRSSCLKTTEPFKKE-NEQMVEVAQEVEPCSKQPVECFTKAEK 545

Query: 249  LTDIGSQPSMPSHAITCHASSLLGDAGFETVLPGKIDNGEVEELEGVAVNVQIKDNNQPV 70
               + S   +PS +  C   S   +  F T       N E+   +   V++   +   PV
Sbjct: 546  SNHVESSRFLPSESNACSKVSNCEELSFRT-------NYEIVRKDSEDVDMINPELCSPV 598

Query: 69   NKD 61
            ++D
Sbjct: 599  SRD 601


>ref|XP_002438776.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
            gi|241916999|gb|EER90143.1| hypothetical protein
            SORBIDRAFT_10g026010 [Sorghum bicolor]
          Length = 979

 Score =  639 bits (1647), Expect = e-180
 Identities = 317/491 (64%), Positives = 367/491 (74%), Gaps = 12/491 (2%)
 Frame = -3

Query: 1728 VLLFAGAFFILRRAASRYFFVGDDPASFVA--EETRCSPM----------AVAGGPCAVC 1585
            ++LF+ A   +RRAASRYF V  D A F A  ++    PM          A   GPCA C
Sbjct: 31   LVLFSAAVVAVRRAASRYFVV--DAAGFAASYDDHHHDPMGNPQEQGAAAADLMGPCAAC 88

Query: 1584 GEPGTKKCSRCKSVLYCSQVCQAKHWGADHKQKCKQITSSNDVTLISDMHKRKXXXXXXX 1405
            G   +KKCSRCK V YCSQ CQ  HW +DHK KCKQ+ S +    +S   +         
Sbjct: 89   GGVASKKCSRCKRVRYCSQECQTNHWQSDHKFKCKQMKSLDPADKLSSGGEANNKKTSGF 148

Query: 1404 XXXXSHGTCKVLPESKKILFPYDEFVKLFDWDKPGFPPCGLLNCGNSCFANVVLQCLACT 1225
                    CK + + + +LFPYDEF+KL++W +  F PCGL+NCGNSCFANVVLQCL+CT
Sbjct: 149  GRISLVPACKKISKGQ-VLFPYDEFLKLYNWKEFDFVPCGLMNCGNSCFANVVLQCLSCT 207

Query: 1224 RPLTAYLLEKDHSRGCIRKRDDWCFLCELQIHIQRASESLHPFSPLNILSRLPNIGGNLG 1045
            RPL +YLL KDHSR C  + +DWCFLCELQ HI RAS SLHPF+P NILS LPNIGGNLG
Sbjct: 208  RPLVSYLLGKDHSRECSMRHEDWCFLCELQCHIHRASGSLHPFAPTNILSHLPNIGGNLG 267

Query: 1044 CGRQEDAHEFMRFAIDTMQSICLDEFGGEKALNMSSQETTLIQHIFGGQLLSQVICTKCN 865
             GRQEDAHEFMRFAID MQS CLDE+GGEKA+++S+QETT+IQHIFGG+L SQV CT C 
Sbjct: 268  FGRQEDAHEFMRFAIDKMQSACLDEYGGEKAVDLSTQETTIIQHIFGGRLQSQVQCTACG 327

Query: 864  MISNRYENMMDLTVEIQGDAEYLEECLDQFTAEEWLDGDNKYKCDGCNDYVKACKRLTVH 685
            M+SNRY+NMMDLTVEIQGDAE LE+CLDQFTA EWLDGDNKYKCDGCNDYVKA K L+VH
Sbjct: 328  MVSNRYDNMMDLTVEIQGDAESLEKCLDQFTAIEWLDGDNKYKCDGCNDYVKARKHLSVH 387

Query: 684  RAPNVLTITLKRFQSGRFGKLNKRVAFPENLDLTPYMSGNRDGTDVYTLYAVVVHVDMLN 505
            +APN+LTITLKRFQSGRFGKLNKRV FP  LDLTPY S   DG+D+Y LYAVVVH+DMLN
Sbjct: 388  QAPNILTITLKRFQSGRFGKLNKRVTFPMELDLTPYTSCT-DGSDLYDLYAVVVHLDMLN 446

Query: 504  ASFFGHYICYTKGYCGRWYRIDDCKVMNVDVDEVLSQGAYMLLYRRKNVRPEPFAKPLEE 325
            ASFFGHYICY KGY GRWY+IDDCKVM VD +EV +QGAYMLLY R+  RP+P     E 
Sbjct: 447  ASFFGHYICYIKGYQGRWYKIDDCKVMVVDEEEVHAQGAYMLLYSRRTARPKPLVTVDES 506

Query: 324  PMKRNLTELDP 292
              ++   +L P
Sbjct: 507  VKQQQQCKLLP 517


>emb|CBI23999.3| unnamed protein product [Vitis vinifera]
          Length = 892

 Score =  634 bits (1636), Expect = e-179
 Identities = 323/528 (61%), Positives = 369/528 (69%), Gaps = 13/528 (2%)
 Frame = -3

Query: 1605 GGPCAVCGEPGTKKCSRCKSVLYCSQVCQAKHWGADHKQKCKQITSSNDVTLI-SDMHKR 1429
            G  C VCG  GTKKCS CK+V YCSQ CQA HW + HK KCK    S    L  S  H  
Sbjct: 8    GDSCLVCGNLGTKKCSGCKAVRYCSQTCQATHWKSGHKTKCKDFQLSGKANLADSTTHSG 67

Query: 1428 KXXXXXXXXXXXS------HGTCKVLPESKKILFPYDEFVKLFDWDKPGFPPCGLLNCGN 1267
            +                   GT K+L +SK+ILFPYDEFV+ F+WDKPGFPPCGL+NCGN
Sbjct: 68   RKASGVGVNNSNGIALVPSSGTSKILKQSKEILFPYDEFVEFFNWDKPGFPPCGLINCGN 127

Query: 1266 SCFANVVLQCLACTRPLTAYLLEKDHSRGCIRKRDDWCFLCELQIHIQRASESLHPFSPL 1087
            SCFANVVLQCLA TRPL AYLLEK H R C  +R+DWCFLCE Q+H++RAS S  PFSP+
Sbjct: 128  SCFANVVLQCLAYTRPLVAYLLEKGHRRQC--RRNDWCFLCEFQVHVERASHSPQPFSPI 185

Query: 1086 NILSRLPNIGGNLGCGRQEDAHEFMRFAIDTMQSICLDEFGGEKALNMSSQETTLIQHIF 907
            NILSRLP+IGGNLG G+QEDAHEFMRFAIDTMQS+CLDEFGGEK+++ SSQETTLIQHIF
Sbjct: 186  NILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEFGGEKSVHPSSQETTLIQHIF 245

Query: 906  GGQLLSQVICTKCNMISNRYENMMDLTVEIQGDAEYLEECLDQFTAEEWLDGDNKYKCDG 727
            GG L SQVICTKC+ ISN+YENMMDLTVEI GDA  LEECLDQFT  EWL G+N YKCDG
Sbjct: 246  GGHLQSQVICTKCSKISNQYENMMDLTVEIHGDAASLEECLDQFTVTEWLHGENMYKCDG 305

Query: 726  CNDYVKACKRLTVHRAPNVLTITLKRFQSGRFGKLNKRVAFPENLDLTPYMSGNRDGTDV 547
            CNDYVKA KRLTV  APN+LTI LKRFQSGRFGKLNKRV FPE LDL+PYMS    GTDV
Sbjct: 306  CNDYVKASKRLTVRHAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSKAVVGTDV 365

Query: 546  YTLYAVVVHVDMLNASFFGHYICYTKGYCGRWYRIDDCKVMNVDVDEVLSQGAYMLLYRR 367
            Y LYAVVVH+DMLNASFFGHY+CYTK + G WYRIDDCKV  V++D+VLSQGAYMLLY R
Sbjct: 366  YKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCKVTRVELDDVLSQGAYMLLYSR 425

Query: 366  KNVR------PEPFAKPLEEPMKRNLTELDPMLSSTCNGTDDVHELTDIGSQPSMPSHAI 205
              VR       EPF K   E M     E++P             +   + S   +PS + 
Sbjct: 426  VCVRSSCLKTTEPFKKE-NEQMVEVAQEVEPCSKQPVECFTKAEKSNHVESSRFLPSESN 484

Query: 204  TCHASSLLGDAGFETVLPGKIDNGEVEELEGVAVNVQIKDNNQPVNKD 61
             C   S   +  F T       N E+   +   V++   +   PV++D
Sbjct: 485  ACSKVSNCEELSFRT-------NYEIVRKDSEDVDMINPELCSPVSRD 525


>gb|AFW76150.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
            [Zea mays]
          Length = 944

 Score =  631 bits (1628), Expect = e-178
 Identities = 317/490 (64%), Positives = 361/490 (73%), Gaps = 19/490 (3%)
 Frame = -3

Query: 1764 DLPALSRFFFTAVLLFAGAFFILRRAASRYFFVGDDPASFVAE------ETRCSPMAVAG 1603
            DL A+ +     ++LF+ A   +RRAASRYF V  D A F A        +  SPM+  G
Sbjct: 18   DLSAVIQAAVVGLVLFSAAVVAVRRAASRYFVV--DAAGFAASYDDHHHSSPASPMSSKG 75

Query: 1602 -------------GPCAVCGEPGTKKCSRCKSVLYCSQVCQAKHWGADHKQKCKQITSSN 1462
                         GPCA CG   +KKCS CK V YCSQ CQ KHW  DHK KCKQ+ S +
Sbjct: 76   NRPEQGGAAADLTGPCAACGVVTSKKCSGCKRVRYCSQECQTKHWQIDHKFKCKQMKSLD 135

Query: 1461 DVTLISDMHKRKXXXXXXXXXXXSHGTCKVLPESKKILFPYDEFVKLFDWDKPGFPPCGL 1282
                +S   +                 CK + + + +LFPYDEF+KL++W      PCGL
Sbjct: 136  LADKLSCGGEANSKKTSGFGRISLVPACKKISKGQ-VLFPYDEFLKLYNWKDLDVVPCGL 194

Query: 1281 LNCGNSCFANVVLQCLACTRPLTAYLLEKDHSRGCIRKRDDWCFLCELQIHIQRASESLH 1102
            +NCGNSCFANVVLQCL+CTRPL AYLL KDHSR C  + +DWCFLCELQ HIQRAS SLH
Sbjct: 195  MNCGNSCFANVVLQCLSCTRPLVAYLLGKDHSRECSVRHEDWCFLCELQCHIQRASGSLH 254

Query: 1101 PFSPLNILSRLPNIGGNLGCGRQEDAHEFMRFAIDTMQSICLDEFGGEKALNMSSQETTL 922
            PF+P NILS LPNIGGNLG GRQEDAHEFMRFAID MQS CLDE+GGEKA+++S QETT+
Sbjct: 255  PFAPTNILSHLPNIGGNLGVGRQEDAHEFMRFAIDKMQSACLDEYGGEKAVDLSIQETTI 314

Query: 921  IQHIFGGQLLSQVICTKCNMISNRYENMMDLTVEIQGDAEYLEECLDQFTAEEWLDGDNK 742
            IQHIFGG+L SQV CT C M+SNRY+NMMDLTVEIQGDAE LE CLDQFTA EWLDGDNK
Sbjct: 315  IQHIFGGRLQSQVQCTTCGMVSNRYDNMMDLTVEIQGDAESLERCLDQFTAVEWLDGDNK 374

Query: 741  YKCDGCNDYVKACKRLTVHRAPNVLTITLKRFQSGRFGKLNKRVAFPENLDLTPYMSGNR 562
            YKCDGCNDYVKA K L+V +APN+LTITLKRFQ+GRFGKLNKRV FP  LDLTPYMS   
Sbjct: 375  YKCDGCNDYVKARKHLSVQQAPNILTITLKRFQTGRFGKLNKRVTFPMELDLTPYMSCT- 433

Query: 561  DGTDVYTLYAVVVHVDMLNASFFGHYICYTKGYCGRWYRIDDCKVMNVDVDEVLSQGAYM 382
            DG+D+Y LYAVVVH+DMLNASFFGHYICY KGY GRWY+IDDCKVM VD +EV +QGAYM
Sbjct: 434  DGSDLYDLYAVVVHLDMLNASFFGHYICYIKGYQGRWYKIDDCKVMVVDEEEVHAQGAYM 493

Query: 381  LLYRRKNVRP 352
            LLY R+  RP
Sbjct: 494  LLYSRRTARP 503


>dbj|BAD37420.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica Group]
            gi|51535599|dbj|BAD37542.1| putative ubiquitin-specific
            protease 15 [Oryza sativa Japonica Group]
          Length = 1069

 Score =  630 bits (1624), Expect = e-178
 Identities = 323/517 (62%), Positives = 369/517 (71%), Gaps = 33/517 (6%)
 Frame = -3

Query: 1764 DLPALSRFFFTAVLLFAGAFFILRRAASRYFFVGDDPASFVAEE---------------- 1633
            DL A+ +     ++LF+ A   +RRAASRYF V  D A F A                  
Sbjct: 21   DLSAVIQAAVVGLVLFSAAVVAVRRAASRYFVV--DAAGFAASSYDDHHHPHHHLVMTPR 78

Query: 1632 ------------TRCSPMAVAGG--PCAVCGEPGTKKCSRCKSVLYCSQVCQAKHWGADH 1495
                         + +  A +GG  PCA CG   TKKCS CK V YCSQ CQ+KHW + H
Sbjct: 79   GEEQQRQQGGGAAQGAQAAASGGGEPCAACGYIATKKCSGCKRVRYCSQGCQSKHWQSGH 138

Query: 1494 KQKCKQITSSNDVTLISDMHKRKXXXXXXXXXXXSHGTCKVLPESK---KILFPYDEFVK 1324
            K KCKQ+  S      S   K               G   ++P  +   K++FPYDEF+K
Sbjct: 139  KFKCKQMKKS------SPADKLSGGGEEDRNKLSGFGPISLVPARRKLNKVIFPYDEFLK 192

Query: 1323 LFDWDKPGFPPCGLLNCGNSCFANVVLQCLACTRPLTAYLLEKDHSRGCIRKRDDWCFLC 1144
            L +W    + PCGLLNCGNSCFANVVLQCL+CTRPL AYLL  DHSR C ++ +DWCFLC
Sbjct: 193  LCNWRDLDYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLC 252

Query: 1143 ELQIHIQRASESLHPFSPLNILSRLPNIGGNLGCGRQEDAHEFMRFAIDTMQSICLDEFG 964
            ELQ HIQRASES+HPF+P NILS LPNIGGNLG GRQEDAHEFMRFAID MQS CLDEFG
Sbjct: 253  ELQCHIQRASESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFG 312

Query: 963  GEKALNMSSQETTLIQHIFGGQLLSQVICTKCNMISNRYENMMDLTVEIQGDAEYLEECL 784
            GEKA++ S+QETTLIQHIFGG+L SQV CT C M+SNRYENMMDLTVEI GDA+ LEECL
Sbjct: 313  GEKAVDPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECL 372

Query: 783  DQFTAEEWLDGDNKYKCDGCNDYVKACKRLTVHRAPNVLTITLKRFQSGRFGKLNKRVAF 604
            D+FTA EWLDGDNKYKCDGC+DYVKA KRLTV++APN+LTITLKRFQSGRFGKLNKRV F
Sbjct: 373  DKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLNKRVTF 432

Query: 603  PENLDLTPYMSGNRDGTDVYTLYAVVVHVDMLNASFFGHYICYTKGYCGRWYRIDDCKVM 424
            P  LDLTPYMS + DG+D Y LYAVVVH+DMLNASFFGHYICY K Y GRWY+IDDCKVM
Sbjct: 433  PMKLDLTPYMS-STDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVM 491

Query: 423  NVDVDEVLSQGAYMLLYRRKNVRPEPFAKPLEEPMKR 313
             VD +EV +QGAYMLLY R+  RP P    +EE MK+
Sbjct: 492  AVDEEEVHAQGAYMLLYSRRTARPRPLI-AVEELMKQ 527


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