BLASTX nr result

ID: Dioscorea21_contig00023254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023254
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus...   135   3e-30
ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucum...   131   6e-29
ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucum...   131   6e-29
ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana...   129   3e-28
ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [V...   128   4e-28

>ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
           gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 563

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/81 (79%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
 Frame = -3

Query: 240 DGTES-TPELHLYNTMSRRKEPFRPLVPGKVGMYVCGVTPYDLSHIGHARVYVTFDVLFR 64
           DGT + + EL+LYNTMSR K+ F+P V GKVGMYVCGVT YDLSHIGHARVYVTFDVL+R
Sbjct: 62  DGTLTPSTELYLYNTMSRNKDLFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYR 121

Query: 63  YLQHLNYEVCYVRNFTDVDDK 1
           YL+HL Y+VCYVRNFTDVDDK
Sbjct: 122 YLKHLGYDVCYVRNFTDVDDK 142


>ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
          Length = 576

 Score =  131 bits (329), Expect = 6e-29
 Identities = 64/80 (80%), Positives = 69/80 (86%)
 Frame = -3

Query: 240 DGTESTPELHLYNTMSRRKEPFRPLVPGKVGMYVCGVTPYDLSHIGHARVYVTFDVLFRY 61
           D T S  EL L+NTMSR+KE F+P V GKVGMYVCGVT YDLSHIGHARVYVTFDVL+RY
Sbjct: 72  DSTSS--ELWLHNTMSRKKEVFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRY 129

Query: 60  LQHLNYEVCYVRNFTDVDDK 1
           L+HL YEV YVRNFTDVDDK
Sbjct: 130 LRHLGYEVLYVRNFTDVDDK 149


>ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
          Length = 576

 Score =  131 bits (329), Expect = 6e-29
 Identities = 64/80 (80%), Positives = 69/80 (86%)
 Frame = -3

Query: 240 DGTESTPELHLYNTMSRRKEPFRPLVPGKVGMYVCGVTPYDLSHIGHARVYVTFDVLFRY 61
           D T S  EL L+NTMSR+KE F+P V GKVGMYVCGVT YDLSHIGHARVYVTFDVL+RY
Sbjct: 72  DSTSS--ELWLHNTMSRKKEVFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRY 129

Query: 60  LQHLNYEVCYVRNFTDVDDK 1
           L+HL YEV YVRNFTDVDDK
Sbjct: 130 LRHLGYEVLYVRNFTDVDDK 149


>ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
           gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase
           [Arabidopsis thaliana]
          Length = 563

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/73 (83%), Positives = 65/73 (89%)
 Frame = -3

Query: 219 ELHLYNTMSRRKEPFRPLVPGKVGMYVCGVTPYDLSHIGHARVYVTFDVLFRYLQHLNYE 40
           EL L+NTMSR+KE F+P V GKVGMYVCGVT YDLSHIGHARVYVTFDVL RYL+HL YE
Sbjct: 64  ELWLHNTMSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYE 123

Query: 39  VCYVRNFTDVDDK 1
           V YVRNFTDVDDK
Sbjct: 124 VSYVRNFTDVDDK 136


>ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
          Length = 571

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/73 (82%), Positives = 66/73 (90%)
 Frame = -3

Query: 219 ELHLYNTMSRRKEPFRPLVPGKVGMYVCGVTPYDLSHIGHARVYVTFDVLFRYLQHLNYE 40
           EL LYNTMSR+KE F+P V G+VGMYVCGVT YDLSHIGHARVYV+FDVL+RYL+HL YE
Sbjct: 74  ELWLYNTMSRQKEVFKPKVDGRVGMYVCGVTAYDLSHIGHARVYVSFDVLYRYLRHLEYE 133

Query: 39  VCYVRNFTDVDDK 1
           V YVRNFTDVDDK
Sbjct: 134 VNYVRNFTDVDDK 146


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